BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0140.0006.p         (174 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DR1910 [G] COG3265 Gluconate kinase Dra Deinococcus radiodurans       174   1e-43
SMa0514 [G] COG3265 Gluconate kinase Sme Sinorhizobium meliloti       158   5e-39
VC0287 [G] COG3265 Gluconate kinase Vch Vibrio cholerae               152   5e-37
AGc329 [G] COG3265 Gluconate kinase Atu Agrobacterium tumefacien...   149   4e-36
YPO3953 [G] COG3265 Gluconate kinase Ype Yersinia pestis              142   3e-34

>DR1910 [G] COG3265 Gluconate kinase Dra Deinococcus radiodurans
          Length = 172

 Score =  174 bits (440), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/159 (51%), Positives = 108/159 (67%)

Query: 13  MGVSGSGKSTIADRLAIRIGWRFEDGDSFHPPGNVAKMHSGQPLTDEDRWPWLRAIADEI 72
           MGVSGSGKST+A  LA R+GW F + D FHPP NVAKM  G PLTDEDRWPWLRAI D +
Sbjct: 1   MGVSGSGKSTVARALAERLGWAFAEADKFHPPENVAKMQGGTPLTDEDRWPWLRAIRDWL 60

Query: 73  DRTCGVRERAVIACSALKRAYRDILVHGRDDIRIVFLDGSQELIATRLGARKGHFMPPGL 132
            +        V+ CSAL+R+YRD+L     ++R V L G+++L+A R+G R+GHFMP  L
Sbjct: 61  TQEAQAGHSTVVTCSALRRSYRDVLREAAGEVRFVHLTGTRDLLAERMGHRQGHFMPASL 120

Query: 133 LASQFKTLEPPTPEERPITVAIDRPVEIIVEDIVTQLKL 171
           L SQ  TLE P P+E  +T+ I    + +V +++  L+L
Sbjct: 121 LDSQLATLEVPGPDEHALTLNIGAAPDELVREVLAGLQL 159


>SMa0514 [G] COG3265 Gluconate kinase Sme Sinorhizobium meliloti
          Length = 172

 Score =  158 bits (400), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 81/165 (49%), Positives = 109/165 (66%), Gaps = 10/165 (6%)

Query: 10  LVVMGVSGSGKSTIADRLAIRIGWRFEDGDSFHPPGNVAKMHSGQPLTDEDRWPWLRAIA 69
           +V+MGV+G GKS I   LA R+G  + DGD  HPP N+A+M  G+PLTD+DRWPWL  + 
Sbjct: 10  IVLMGVAGCGKSAIGAALATRLGATYVDGDDLHPPENIARMSRGEPLTDDDRWPWLTLVG 69

Query: 70  DEIDRTCGVRERAVIACSALKRAYRDILVHGRDD----IRIVFLDGSQELIATRLGARKG 125
             +    GV    +I CSALKR YRD   H R++    +  V L G++ LI  R+GAR G
Sbjct: 70  RRLAAPDGV---LIIGCSALKRRYRD---HIRNEAGAPVTFVHLSGTKVLITARMGARAG 123

Query: 126 HFMPPGLLASQFKTLEPPTPEERPITVAIDRPVEIIVEDIVTQLK 170
           HFMP  L+ SQF  LEPPT +E  ITV ID+P+E++V++I  +L+
Sbjct: 124 HFMPVSLIESQFAALEPPTTDENVITVDIDQPLEVLVDEIAVKLE 168


>VC0287 [G] COG3265 Gluconate kinase Vch Vibrio cholerae
          Length = 171

 Score =  152 bits (383), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 75/162 (46%), Positives = 100/162 (61%)

Query: 9   ALVVMGVSGSGKSTIADRLAIRIGWRFEDGDSFHPPGNVAKMHSGQPLTDEDRWPWLRAI 68
           +++VMGV   GKSTI + LA + G +F DGD  HP  N+ KM SGQPL DEDR PWL  I
Sbjct: 5   SIIVMGVCACGKSTIGELLAKQTGRKFIDGDDLHPRANIQKMASGQPLNDEDRKPWLERI 64

Query: 69  ADEIDRTCGVRERAVIACSALKRAYRDILVHGRDDIRIVFLDGSQELIATRLGARKGHFM 128
            D         E  VI CSALK+ YRD +  G  ++  +FLDGS+ELI  R+ AR+GHFM
Sbjct: 65  RDAAYSLESKNEHGVIVCSALKKQYRDQIREGNQNVTFLFLDGSKELIMERMRARQGHFM 124

Query: 129 PPGLLASQFKTLEPPTPEERPITVAIDRPVEIIVEDIVTQLK 170
              ++ SQF+TLE P  E + + + ID  V+ +V   +  L+
Sbjct: 125 KENMVNSQFETLERPDGEPQTLIIPIDCSVQEVVSCAIQALQ 166


>AGc329 [G] COG3265 Gluconate kinase Atu Agrobacterium tumefaciens strain
           C58 (Cereon)
          Length = 163

 Score =  149 bits (375), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 80/160 (50%), Positives = 103/160 (64%), Gaps = 2/160 (1%)

Query: 12  VMGVSGSGKSTIADRLAIRIGWRFEDGDSFHPPGNVAKMHSGQPLTDEDRWPWLRAIADE 71
           +MGVSGSGKST+A+ LA ++G  F +GD  HP  NV KM  G PLTD+DRWPWL  I  E
Sbjct: 1   MMGVSGSGKSTVAEGLAEKLGIAFIEGDKLHPKSNVDKMSEGIPLTDDDRWPWLDLIGAE 60

Query: 72  IDRTCGVRERAVIACSALKRAYRDILVHGRDD-IRIVFLDGSQELIATRLGARKGHFMPP 130
           + R     +  +++CSALK+ YRD L       +  V+LDGS EL++ R+G RKGHFMP 
Sbjct: 61  L-RNGSEGKGVLVSCSALKKIYRDRLREATGGPLAFVYLDGSLELLSRRMGERKGHFMPL 119

Query: 131 GLLASQFKTLEPPTPEERPITVAIDRPVEIIVEDIVTQLK 170
            LL +Q  TLE PT E   +TV+ID   E IV + +  LK
Sbjct: 120 SLLQTQLATLEVPTGEPGVVTVSIDSTPEEIVANALAGLK 159


>YPO3953 [G] COG3265 Gluconate kinase Ype Yersinia pestis
          Length = 167

 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 75/162 (46%), Positives = 98/162 (60%), Gaps = 1/162 (0%)

Query: 9   ALVVMGVSGSGKSTIADRLAIRIGWRFEDGDSFHPPGNVAKMHSGQPLTDEDRWPWLRAI 68
           +++VMGVSGSGK+T+ + +A +I  +F DGD  HP  N+ KM SGQPL D DR PWL  +
Sbjct: 5   SIIVMGVSGSGKTTVGEAVARQIHAKFIDGDDLHPRANIQKMGSGQPLNDADRMPWLERL 64

Query: 69  ADEIDRTCGVRERAVIACSALKRAYRDILVHGRDDIRIVFLDGSQELIATRLGARKGHFM 128
           +D         E  +I CSALKR YRD L  G   +  ++L G+ ++I  RL AR GHFM
Sbjct: 65  SDAAYSLSHKNETGIIVCSALKRCYRDRLREGNQGMVFLYLKGNFDVIMARLQARSGHFM 124

Query: 129 PPGLLASQFKTLEPPTPEE-RPITVAIDRPVEIIVEDIVTQL 169
           P  LL SQF  LE P P+E   I V ID  ++ +V   V  L
Sbjct: 125 PSDLLRSQFDALEEPGPDEPDVICVDIDTDIDEVVRRCVGAL 166