BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0137.0046.p         (183 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc4391 [R] COG3911 Predicted ATPase Atu Agrobacterium tumefacie...   207   7e-54
mlr1469 [R] COG3911 Predicted ATPase Mlo Mesorhizobium loti           107   2e-23
VC2743 [R] COG3911 Predicted ATPase Vch Vibrio cholerae                74   1e-13

>AGc4391 [R] COG3911 Predicted ATPase Atu Agrobacterium tumefaciens strain
           C58 (Cereon)
          Length = 174

 Score =  207 bits (528), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 99/174 (56%), Positives = 127/174 (72%), Gaps = 1/174 (0%)

Query: 3   NRFVLISGCSGGGKSTLLAELAARGYPVVEEPGRRIVTDELASGGNALPWVDPAPFLRRA 62
           NRF ++SGCSGGGKSTLLAELA RG+  VEEPGRRIV +E  +GG ALPW+D   F RRA
Sbjct: 2   NRFFILSGCSGGGKSTLLAELARRGFATVEEPGRRIVIEETRNGGTALPWIDMQAFARRA 61

Query: 63  VDVALQDIEMAKAHSGWVFFDRGLIDAASALEALTGEPVLHKICSVHRYHRRVFVTPPWP 122
           + +AL+D        G VFFDRGLIDAASAL  ++G+  ++ +   HRY+  VF+TPPWP
Sbjct: 62  IAMALED-RRVTPKEGLVFFDRGLIDAASALHHISGDRFVNTLRDTHRYNSLVFLTPPWP 120

Query: 123 EIYVTDSERRHGFEAATAEYQRLMETLPALGYDVIGLPKLSPSVRADFVLTTLG 176
           EIY +D ER+HGF+AA  EY+RL+     LGYD++ LPK + + RAD +LT +G
Sbjct: 121 EIYQSDDERKHGFDAAVEEYERLVRDYEGLGYDIVVLPKSAVAERADLILTRIG 174


>mlr1469 [R] COG3911 Predicted ATPase Mlo Mesorhizobium loti
          Length = 183

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 4/177 (2%)

Query: 3   NRFVLISGCSGGGKSTLLAELAARGYPVVEEPGRRIVTDELASGGNALPWVDPAPFLRRA 62
           +R  +++G  G GK+TL+A L   G+      GR IV D+ + GG ALPW D   F    
Sbjct: 6   DRVFVLTGGPGSGKTTLIAALRRAGFATSVVAGRGIVRDQSSIGGTALPWSDRTLFAELM 65

Query: 63  VDVALQDIEMAKAHSGWVFFDRGLIDAASALEALTGEPVLHKICSV---HRYHRRVFVTP 119
           +   ++  + A    G VFFDRG+ +    L  L+G PV   + +     RY+ RVF+ P
Sbjct: 66  LSWEMRSYQNAVEQKGPVFFDRGVPETLGYLR-LSGLPVADHVSTAAKRFRYNPRVFIAP 124

Query: 120 PWPEIYVTDSERRHGFEAATAEYQRLMETLPALGYDVIGLPKLSPSVRADFVLTTLG 176
           PWP+I+  D ER+   + A   Y  L E    LGY+++ LP      R  FVL   G
Sbjct: 125 PWPDIFAQDEERKQTPDEAKCTYHALAEIYTELGYELVPLPLAPVETRLRFVLADAG 181


>VC2743 [R] COG3911 Predicted ATPase Vch Vibrio cholerae
          Length = 184

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 78/177 (44%), Gaps = 5/177 (2%)

Query: 2   QNRF--VLISGCSGGGKSTLLAELAARGYPVVEEPGRRIVTDELASGGNALPWVDPAPFL 59
           +NR   V+ISG  G GK+TLL  LA RGY    E  R+++  E       LPW D   F 
Sbjct: 6   RNRMSIVIISGGPGAGKTTLLNALAERGYATYPEIPRQLIEQESLKQDGILPWHDLLAFA 65

Query: 60  RRAVDVALQDIEMAKAHSGWVFFDRGLID-AASALEALTGEPVLHKICSVHRYHRRVFVT 118
               D  L   + A++ S   F DR + D  A  L A    P  +   S   YH +V + 
Sbjct: 66  ELCYDAMLVQKQSAQSAS-MAFLDRAIPDICAYLLGAELAVPAKYWSAS-SGYHPQVLMC 123

Query: 119 PPWPEIYVTDSERRHGFEAATAEYQRLMETLPALGYDVIGLPKLSPSVRADFVLTTL 175
            P    Y  D  R +  E A   +  L++    LGY  I +P  S   R  FVLT L
Sbjct: 124 QPSAITYQQDEVRPYTLEEAVHIHHGLVKAYSGLGYQCIDVPMASIEQRVAFVLTAL 180