BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0137.0030.p         (214 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA1402 [R] COG4122 Predicted O-methyltransferase Pae Pseudomonas...   124   2e-28
mll5689 Non COG                                                       122   9e-28

>PA1402 [R] COG4122 Predicted O-methyltransferase Pae Pseudomonas
           aeruginosa
          Length = 221

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 100/165 (60%), Gaps = 10/165 (6%)

Query: 52  IHPEQGELIYLLCRGLRAGRVAEFATSVGMSTLYFAAAMRDNGGGTVIGSEIVPAKVAAA 111
           +  E G L+Y+L R   A  + EF TS G+STL+ AAA+RDNGGG +IGSE  P+K   A
Sbjct: 63  VSRETGCLLYMLARSSSARSIVEFGTSFGLSTLHLAAALRDNGGGRLIGSEFEPSKAERA 122

Query: 112 KRNLADAGLADYADIREGDARKTL-PDLGGPIDFILIDGWPGDKGPTLARQVIEIVAPQL 170
           +RNLA  GL D  ++REGDA +TL  DL   ID +L+DG        L  +V+ ++  +L
Sbjct: 123 RRNLAAGGLLDLVELREGDALQTLAKDLPDSIDLVLLDG-----AKALYPEVLALLESRL 177

Query: 171 RVGGYVMNDNAEA--DFLEFVRDPNNGFVSITLPLKGGTELCLKV 213
           R G  V+ DNAE   ++L  VR P NG++S   P     EL +++
Sbjct: 178 RPGALVIADNAEHSPEYLAHVRSPANGYLST--PFAEDVELSMRL 220


>mll5689 Non COG
          Length = 218

 Score =  122 bits (305), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 101/167 (60%), Gaps = 10/167 (5%)

Query: 50  FSIHPEQGELIYLLCRGLRAGRVAEFATSVGMSTLYFAAAMRDNGGGTVIGSEIVPAKVA 109
            +I PE G L+Y+L R   A  + EF TS G+STLY AAA+RDNGGG +I +E  P+KV 
Sbjct: 58  LAISPETGTLLYMLARSSGARIIIEFGTSFGISTLYLAAALRDNGGGRLITTEFEPSKVT 117

Query: 110 AAKRNLADAGLADYADIREGDARKTLP-DLGGPIDFILIDGWPGDKGPTLARQVIEIVAP 168
            AK NL + GL D   IREGDA +TL  DL   ID +L+DG        +  +++ +V  
Sbjct: 118 RAKANLTEGGLIDLVGIREGDALETLSADLPETIDLLLLDG-----AKAIYPEILSLVES 172

Query: 169 QLRVGGYVMNDNAE--ADFLEFVRDPNNGFVSITLPLKGGTELCLKV 213
           +LR G  V+ DNA+   ++LE VR P +G++S   P     EL +++
Sbjct: 173 RLRPGALVIADNADFSPEYLERVRSPASGYMST--PFGEDVELSVRL 217