BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0137.0003.p (258 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport... 341 9e-94 BMEII0343 [E] COG0411 ABC-type branched-chain amino acid transpo... 301 1e-81 AGl1459 [E] COG0411 ABC-type branched-chain amino acid transport... 300 3e-81 SMc03120 [E] COG0411 ABC-type branched-chain amino acid transpor... 297 2e-80 BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 216 6e-56 >RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 256 Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 161/247 (65%), Positives = 199/247 (80%) Query: 8 LADEFILETSGLTKEFAGFFAVRDVALKVRRGSIHALIGPNGAGKTTCFNLLTKFLKPSA 67 +A + ILET GLTK F GF AV DV L+VRRGSIHALIGPNGAGKTTCFNLLTKFL P+ Sbjct: 1 MAQDIILETRGLTKAFKGFTAVSDVNLRVRRGSIHALIGPNGAGKTTCFNLLTKFLVPTR 60 Query: 68 GQIRYKGHDITAMPPADVARLGLVRSFQISAVFPHLTALENVRVALQRQHGSSFDFWRSK 127 G I + G DIT PA +AR G++RSFQISAVFPHL+ LENVR+ LQRQ G+++ FWRS+ Sbjct: 61 GTILFNGVDITPERPAQIARRGVIRSFQISAVFPHLSVLENVRIGLQRQLGTAYAFWRSE 120 Query: 128 SVLDRFNPRAHELLNDVGLSEFANTPAVEMPYGRKRALEIATTLALDPEMMLLDEPMAGM 187 L N RA +LL+ VGL+ FA T VE+PYGRKRALEIATTLA++PE+MLLDEP GM Sbjct: 121 KTLAVLNDRAMQLLDQVGLTPFAGTVTVELPYGRKRALEIATTLAMEPELMLLDEPTQGM 180 Query: 188 GHEDIDKIAALIKRISAKYTILMVEHNLSVVANLSDIITVLTRGQVLAEGNYADLSKDER 247 GHED+D++ LI+R++ TILMVEHN++VV++++D ITVL RGQ+LAEG Y D+SK+ + Sbjct: 181 GHEDVDRVTELIQRVAEGRTILMVEHNMNVVSSIADKITVLQRGQILAEGPYEDVSKNPQ 240 Query: 248 VKEAYLG 254 V EAY+G Sbjct: 241 VMEAYMG 247 >BMEII0343 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 272 Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 149/249 (59%), Positives = 185/249 (74%) Query: 9 ADEFILETSGLTKEFAGFFAVRDVALKVRRGSIHALIGPNGAGKTTCFNLLTKFLKPSAG 68 A +L GL K F GF AV++V L V +HALIGPNGAGKTT FNLLTKFL+P++G Sbjct: 23 ASGIVLSARGLGKSFGGFHAVKNVDLDVEHARVHALIGPNGAGKTTVFNLLTKFLQPTSG 82 Query: 69 QIRYKGHDITAMPPADVARLGLVRSFQISAVFPHLTALENVRVALQRQHGSSFDFWRSKS 128 +I G IT PA VAR GLVRSFQISA FPHLT LENV+VALQR +G + FWRS S Sbjct: 83 EITLLGETITKTDPARVARKGLVRSFQISATFPHLTVLENVKVALQRPNGLATQFWRSLS 142 Query: 129 VLDRFNPRAHELLNDVGLSEFANTPAVEMPYGRKRALEIATTLALDPEMMLLDEPMAGMG 188 LD + +A ELL VGL++ + A ++ YGRKRALEIATTLALDP+++LLDEP+AGMG Sbjct: 143 ALDWLDAQAVELLERVGLADARHALAADLSYGRKRALEIATTLALDPKVLLLDEPLAGMG 202 Query: 189 HEDIDKIAALIKRISAKYTILMVEHNLSVVANLSDIITVLTRGQVLAEGNYADLSKDERV 248 HED+ IAALI ++ +LMVEHNL VVA+++ +TVL RG++LA G+YA +SKDERV Sbjct: 203 HEDVHTIAALITDVAKDRAVLMVEHNLKVVADIAHHVTVLQRGEILASGDYATVSKDERV 262 Query: 249 KEAYLGAGH 257 + AY+G H Sbjct: 263 RTAYMGTEH 271 >AGl1459 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 268 Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 147/242 (60%), Positives = 179/242 (73%) Query: 13 ILETSGLTKEFAGFFAVRDVALKVRRGSIHALIGPNGAGKTTCFNLLTKFLKPSAGQIRY 72 +L GLTK F F AV++V L V +HALIGPNGAGKTT FNLLTKFL+P+ G I + Sbjct: 23 VLSARGLTKTFGAFAAVKNVDLDVHHARVHALIGPNGAGKTTVFNLLTKFLQPTGGAITF 82 Query: 73 KGHDITAMPPADVARLGLVRSFQISAVFPHLTALENVRVALQRQHGSSFDFWRSKSVLDR 132 G DIT PP VARLGLVRSFQISAVFPHLT LENVRVALQR + + FW S LDR Sbjct: 83 MGTDITKTPPDKVARLGLVRSFQISAVFPHLTVLENVRVALQRPNSLATQFWLPLSSLDR 142 Query: 133 FNPRAHELLNDVGLSEFANTPAVEMPYGRKRALEIATTLALDPEMMLLDEPMAGMGHEDI 192 N RA EL++ VGL+ N A ++ YGRKR LEIATTLALDP+++LLDEPMAGMG ED+ Sbjct: 143 LNARAEELISMVGLTREKNALAADLSYGRKRVLEIATTLALDPKVLLLDEPMAGMGGEDV 202 Query: 193 DKIAALIKRISAKYTILMVEHNLSVVANLSDIITVLTRGQVLAEGNYADLSKDERVKEAY 252 +A LI+ ++ +LMVEHNL VVA++ +TVL RG++LAEG+YA +S D RV+ AY Sbjct: 203 SHVAELIREVAKTRAVLMVEHNLKVVADICHHVTVLQRGEILAEGDYAAVSADPRVRTAY 262 Query: 253 LG 254 +G Sbjct: 263 MG 264 >SMc03120 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Sme Sinorhizobium meliloti Length = 262 Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 145/246 (58%), Positives = 183/246 (74%) Query: 9 ADEFILETSGLTKEFAGFFAVRDVALKVRRGSIHALIGPNGAGKTTCFNLLTKFLKPSAG 68 A +L GL ++F GF AV+DV L V +HALIGPNGAGKTT FNLLTKFL+P+ G Sbjct: 11 APRVVLSARGLRRDFGGFTAVKDVDLDVHHARVHALIGPNGAGKTTVFNLLTKFLQPTHG 70 Query: 69 QIRYKGHDITAMPPADVARLGLVRSFQISAVFPHLTALENVRVALQRQHGSSFDFWRSKS 128 I G DIT P VAR+GLVRSFQISAVFPHLT L+NVRVALQR + + FW+S S Sbjct: 71 TITLLGEDITRTAPDKVARMGLVRSFQISAVFPHLTVLDNVRVALQRPNRLATQFWKSLS 130 Query: 129 VLDRFNPRAHELLNDVGLSEFANTPAVEMPYGRKRALEIATTLALDPEMMLLDEPMAGMG 188 LD N +A +L+ VGL + AN A ++ YGRKR LEIATTLAL+P+++LLDEPMAGMG Sbjct: 131 SLDTLNGKAEQLIRSVGLDKEANAVAADLSYGRKRVLEIATTLALEPKVLLLDEPMAGMG 190 Query: 189 HEDIDKIAALIKRISAKYTILMVEHNLSVVANLSDIITVLTRGQVLAEGNYADLSKDERV 248 HED+ +A +I+ ++ + +LMVEHNLSVVA L +TVL RG++LAEG+YA +S+D RV Sbjct: 191 HEDVGMVAEIIREVARERAVLMVEHNLSVVATLCHHVTVLQRGEILAEGDYATVSEDPRV 250 Query: 249 KEAYLG 254 + AY+G Sbjct: 251 RTAYMG 256 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 107/242 (44%), Positives = 153/242 (63%) Query: 13 ILETSGLTKEFAGFFAVRDVALKVRRGSIHALIGPNGAGKTTCFNLLTKFLKPSAGQIRY 72 IL L K F +R V L VR G HA+IGPNGAGK+T F+L++ PS+G IR+ Sbjct: 6 ILVLDQLNKSFGPAHIIRGVNLAVRDGERHAVIGPNGAGKSTLFHLISGNFTPSSGSIRF 65 Query: 73 KGHDITAMPPADVARLGLVRSFQISAVFPHLTALENVRVALQRQHGSSFDFWRSKSVLDR 132 +G +I + PA V R GL RSFQI+ +FP LT EN+R+A+ R++ F FWR S + + Sbjct: 66 QGEEIGGLTPAAVNRKGLARSFQITNIFPGLTVFENIRLAVMRRYKVQFTFWRPVSSMRK 125 Query: 133 FNPRAHELLNDVGLSEFANTPAVEMPYGRKRALEIATTLALDPEMMLLDEPMAGMGHEDI 192 LL V L+ A T A ++ Y +R+LEI TLA DP +++LDEPMAGM E+ Sbjct: 126 VTAEVESLLEQVRLTARAYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMAGMSQEET 185 Query: 193 DKIAALIKRISAKYTILMVEHNLSVVANLSDIITVLTRGQVLAEGNYADLSKDERVKEAY 252 D LI+ I+ T+++VEH++ VV L+D I+VL G+++A G ++ ++ RV+EAY Sbjct: 186 DYTVGLIREITQNRTLMIVEHDMYVVFTLADRISVLVYGEIIATGTPKEIRENARVREAY 245 Query: 253 LG 254 LG Sbjct: 246 LG 247