BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0137.0001.p         (93 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc03119 [E] COG0410 ABC-type branched-chain amino acid transpor...   132   1e-31
AGl1457 [E] COG0410 ABC-type branched-chain amino acid transport...   127   7e-30
BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transpo...   125   3e-29
RSc3343 [E] COG0410 ABC-type branched-chain amino acid transport...   112   3e-25
ZlivF [E] COG0410 ABC-type branched-chain amino acid transport s...    86   2e-17

>SMc03119 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Sme Sinorhizobium meliloti
          Length = 233

 Score =  132 bits (333), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/93 (66%), Positives = 75/93 (80%)

Query: 1   MLAIARILRTGARFLMLDEPTEGLAPVIIQQIGHTIARLKSQGFTILLVEQNFRFASTVA 60
           MLAIARILRTG R ++LDEPTEGLAPVI+Q+IG  + +LK +G T+LLVEQNFRFAS VA
Sbjct: 141 MLAIARILRTGVRMMLLDEPTEGLAPVIVQRIGEVLKKLKERGMTVLLVEQNFRFASKVA 200

Query: 61  DRYYIVEHGKVIDGFANSELSANMDKLHTYLGV 93
           DR+Y+++HG+V   F  SELS  MD LH  LGV
Sbjct: 201 DRFYLMDHGRVAGEFPVSELSGRMDMLHDVLGV 233


>AGl1457 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Atu Agrobacterium tumefaciens strain
           C58 (Cereon)
          Length = 233

 Score =  127 bits (319), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 57/93 (61%), Positives = 77/93 (82%)

Query: 1   MLAIARILRTGARFLMLDEPTEGLAPVIIQQIGHTIARLKSQGFTILLVEQNFRFASTVA 60
           MLA+ARILRTG + L+LDEPTEGLAPVI+Q+IG  + +LKS+G T++LVEQNFRFAS +A
Sbjct: 141 MLAMARILRTGVKVLLLDEPTEGLAPVIVQRIGEVLQKLKSRGMTVVLVEQNFRFASRIA 200

Query: 61  DRYYIVEHGKVIDGFANSELSANMDKLHTYLGV 93
           DR+Y+++HG+++  F   ELSA M +L+  LGV
Sbjct: 201 DRFYLMDHGQMVSNFPVGELSARMGELNKVLGV 233


>BMEII0342 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Bme Brucella melitensis
          Length = 274

 Score =  125 bits (313), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 59/93 (63%), Positives = 72/93 (77%)

Query: 1   MLAIARILRTGARFLMLDEPTEGLAPVIIQQIGHTIARLKSQGFTILLVEQNFRFASTVA 60
           MLAIARILRTG + L+LDEPTEGLAPVI+Q+IG  +  LK +G T+LLVEQNFRFA+ VA
Sbjct: 182 MLAIARILRTGVKVLLLDEPTEGLAPVIVQRIGDVLVELKKRGMTVLLVEQNFRFAAKVA 241

Query: 61  DRYYIVEHGKVIDGFANSELSANMDKLHTYLGV 93
           DR+Y+++HG V D F  +EL A M  L   LGV
Sbjct: 242 DRFYLMDHGVVTDNFPTTELPARMAALTQALGV 274


>RSc3343 [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component Rso Ralstonia solanacearum
          Length = 246

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 50/93 (53%), Positives = 71/93 (76%)

Query: 1   MLAIARILRTGARFLMLDEPTEGLAPVIIQQIGHTIARLKSQGFTILLVEQNFRFASTVA 60
           MLA+ RILRTGA  L+LDE +EGLAPVI+Q +   I  LK +G+T+++VEQNFRFA+ +A
Sbjct: 154 MLAVGRILRTGANLLLLDEISEGLAPVIVQALARMILMLKKRGYTVVMVEQNFRFAAPLA 213

Query: 61  DRYYIVEHGKVIDGFANSELSANMDKLHTYLGV 93
           DR+Y++EHG++++ F  ++L   M  LH  LGV
Sbjct: 214 DRFYVMEHGRIVERFEAAQLQDKMPILHELLGV 246


>ZlivF [E] COG0410 ABC-type branched-chain amino acid transport systems,
           ATPase component EcZ Escherichia coli O157:H7 EDL933
          Length = 241

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/92 (51%), Positives = 58/92 (63%)

Query: 1   MLAIARILRTGARFLMLDEPTEGLAPVIIQQIGHTIARLKSQGFTILLVEQNFRFASTVA 60
           MLAI R L +  R L+LDEP+ GLAP+IIQQI  TI +L+ QG TI LVEQN   A  +A
Sbjct: 149 MLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLA 208

Query: 61  DRYYIVEHGKVIDGFANSELSANMDKLHTYLG 92
           DR Y++E+G V+       L AN      YLG
Sbjct: 209 DRGYVLENGHVVLSDTGDALLANEAVRSAYLG 240