BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0135.0015.p         (77 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

TM0010_1 [C] COG1894 NADH Tma Thermotoga maritima                      69   3e-12
TM0228 [C] COG1894 NADH Tma Thermotoga maritima                        66   2e-11
MTH1549_1 [C] COG1894 NADH Mth Methanothermobacter thermautotrop...    65   4e-11
SMc02525 [C] COG1894 NADH Sme Sinorhizobium meliloti                   62   4e-10
TM1425_1 [C] COG1894 NADH Tma Thermotoga maritima                      61   7e-10

>TM0010_1 [C] COG1894 NADH Tma Thermotoga maritima
          Length = 527

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 6/76 (7%)

Query: 1   MKFFEDESCGQCTPCRAGTEKAALLMQQPVWNK------ELLDQLSQAMRDASICGLGQA 54
           ++F  +ESCG+CTPCR GT+K   ++++    +      E L++L+  ++D S+CGLGQ 
Sbjct: 446 LEFTVEESCGKCTPCREGTKKMLEILEKITSGEGTEEDIEELEKLAHVVKDTSLCGLGQT 505

Query: 55  ASNPLTSVIKYFPDGF 70
           A NP+ S ++YF D +
Sbjct: 506 APNPVLSTLRYFRDEY 521


>TM0228 [C] COG1894 NADH Tma Thermotoga maritima
          Length = 545

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 6/83 (7%)

Query: 1   MKFFEDESCGQCTPCRAGTEKAALLMQQPV---WNKELLDQLSQAMRDA---SICGLGQA 54
           M+FFE ESCG+CTPCR GT     ++++       KE LD L +  R+A   S CGLGQ+
Sbjct: 440 MRFFEHESCGKCTPCREGTRMIVNILERISRGEGKKEDLDTLREIARNAGETSFCGLGQS 499

Query: 55  ASNPLTSVIKYFPDGFRPQQAAE 77
              PL S++  F + F+    A+
Sbjct: 500 IPVPLLSIVDNFEEEFKAHIGAD 522


>MTH1549_1 [C] COG1894 NADH Mth Methanothermobacter thermautotrophicus
          Length = 545

 Score = 64.7 bits (156), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 49/76 (64%), Gaps = 6/76 (7%)

Query: 1   MKFFEDESCGQCTPCRAGTEKAALLMQQPVW------NKELLDQLSQAMRDASICGLGQA 54
           ++F + ESCG+C PCR GT +  +++   V       + ++L  +++++R AS+CGLGQ 
Sbjct: 462 LEFTQRESCGKCVPCRVGTRQMLMILNDIVEGSGRPEDPDILRDVAESVRAASLCGLGQT 521

Query: 55  ASNPLTSVIKYFPDGF 70
           + NP+ + ++YF D +
Sbjct: 522 SPNPVLTTLRYFEDEY 537


>SMc02525 [C] COG1894 NADH Sme Sinorhizobium meliloti
          Length = 518

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 1   MKFFEDESCGQCTPCRAGTEKAALLMQ------QPVWNKELLDQLSQAMRDASICGLGQA 54
           M+F   ESCG+CTPCR G+ +   +        +P  N+ELL  L   M+  S+C LG  
Sbjct: 433 MEFCAVESCGKCTPCRIGSTRGVEVADRIAAGIEPEKNRELLADLCNTMKFGSLCALGGF 492

Query: 55  ASNPLTSVIKYFPDGFRPQQAAE 77
              P+ S + +FP+ F P    E
Sbjct: 493 TPYPVMSAMTHFPEDFSPVPVVE 515


>TM1425_1 [C] COG1894 NADH Tma Thermotoga maritima
          Length = 560

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 6/76 (7%)

Query: 1   MKFFEDESCGQCTPCRAGTEKAALLMQQPVWNK------ELLDQLSQAMRDASICGLGQA 54
           + F + ESCG+C PCR GT +A  ++++    K      + L+ LS+ ++ AS+CGLG+ 
Sbjct: 477 LDFTKRESCGKCVPCREGTMQAYNILEKFTHGKATYEDLKTLEHLSKTIKTASLCGLGKT 536

Query: 55  ASNPLTSVIKYFPDGF 70
           A NP+ S +K F + +
Sbjct: 537 APNPILSTLKLFREEY 552