BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0134.0028.p (249 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll4297 [IQR] COG1028 Dehydrogenases with different specificitie... 312 4e-85 SMc02486 [IQR] COG1028 Dehydrogenases with different specificiti... 285 9e-77 PA3128 [IQR] COG1028 Dehydrogenases with different specificities... 282 6e-76 RSc2504 [IQR] COG1028 Dehydrogenases with different specificitie... 278 8e-75 VCA0301 [IQR] COG1028 Dehydrogenases with different specificitie... 277 2e-74 >mll4297 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Mlo Mesorhizobium loti Length = 251 Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 161/247 (65%), Positives = 194/247 (78%), Gaps = 2/247 (0%) Query: 4 KVVVITGGSRGIGRATALAAAARGYRIVVGYASNKTAADEVVAAIEAKNGKAIAVKCDVG 63 KV+++TGGSRGIG A A GYR+ V YASN+ AAD +VA I+A G A AVK DVG Sbjct: 6 KVLLVTGGSRGIGAAVCRLGAKAGYRVAVNYASNRAAADALVAEIKAAGGDAFAVKGDVG 65 Query: 64 SEQDILALFKAAD-GFGTLGALVNNAGIVGKSGVRVDEMSAERIQQMMAVNVTGSILCAR 122 E DI+A+F+A D +G L A VNNAGIV + RVDEMSA R+++MM +NV GSILCAR Sbjct: 66 GEADIIAIFEAVDRSYGRLDAFVNNAGIV-DAKARVDEMSAARLERMMRINVVGSILCAR 124 Query: 123 EAVKRMSTRHGGQGGVIVNLSSVAAKLGAPNTYVDYAASKGAIDSFTIGLGYEVANEGIR 182 EAVKRMSTRHGG+GG IVN+SS AA LGAP+ YVDYAASKGAID+FT+GL EVA EGIR Sbjct: 125 EAVKRMSTRHGGKGGAIVNISSAAAVLGAPDNYVDYAASKGAIDTFTVGLAREVALEGIR 184 Query: 183 VAGIRPGLIDTDIHAAGGEPDRAHRLAHMVPMKRVGTADEIANAIVWLISDEASYVTSAI 242 V +RPG+IDTDIHA+GG+PDR + +PMKR GTADE+A A+++L+SD ASY T AI Sbjct: 185 VNAVRPGIIDTDIHASGGQPDRVALIQDTLPMKRAGTADEVAAAVLYLLSDAASYTTGAI 244 Query: 243 LDVSGGR 249 L+VSGGR Sbjct: 245 LNVSGGR 251 >SMc02486 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Sme Sinorhizobium meliloti Length = 250 Score = 285 bits (728), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 154/247 (62%), Positives = 192/247 (77%), Gaps = 2/247 (0%) Query: 4 KVVVITGGSRGIGRATALAAAARGYRIVVGYASNKTAADEVVAAIEAKNGKAIAVKCDVG 63 V+++TGGSRGIG A ALAAA+ G+R+ V YASN+ AA++VV I G A++V+ +VG Sbjct: 5 PVLLVTGGSRGIGAAVALAAASEGWRVAVNYASNRDAAEDVVRRIAEAGGTAVSVEGNVG 64 Query: 64 SEQDILALFKAAD-GFGTLGALVNNAGIVGKSGVRVDEMSAERIQQMMAVNVTGSILCAR 122 E+ + A+F A D FG L LVNNAGI+G RVDE+S ERI+Q+ VNVTGSI CA Sbjct: 65 REEGVRAIFAAVDTAFGRLDGLVNNAGIIGPP-QRVDEVSPERIEQLFRVNVTGSIRCAA 123 Query: 123 EAVKRMSTRHGGQGGVIVNLSSVAAKLGAPNTYVDYAASKGAIDSFTIGLGYEVANEGIR 182 EAV RMS RHGG+GG IVNLSS+AA LGAP YVDYAA+KGAIDSFT+GL EVA EGIR Sbjct: 124 EAVLRMSARHGGRGGSIVNLSSIAAVLGAPGQYVDYAATKGAIDSFTVGLAREVATEGIR 183 Query: 183 VAGIRPGLIDTDIHAAGGEPDRAHRLAHMVPMKRVGTADEIANAIVWLISDEASYVTSAI 242 V +RPG+IDT+IHA+GG PDRA LA +P++R GTA E+A+AI++L+SD+A+YVT I Sbjct: 184 VNAVRPGIIDTEIHASGGLPDRARDLAPTIPIQRPGTAGEVADAILYLLSDKATYVTGTI 243 Query: 243 LDVSGGR 249 L VSGGR Sbjct: 244 LTVSGGR 250 >PA3128 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Pae Pseudomonas aeruginosa Length = 248 Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 145/247 (58%), Positives = 185/247 (74%), Gaps = 2/247 (0%) Query: 4 KVVVITGGSRGIGRATALAAAARGYRIVVGYASNKTAADEVVAAIEAKNGKAIAVKCDVG 63 V++ITG SRGIG ATAL AA RGY +V+ Y N+ AA+ + IE + G+A+AV DV Sbjct: 3 NVMLITGASRGIGAATALLAAERGYAVVLNYLRNREAAEALRQRIERQGGEALAVAADVA 62 Query: 64 SEQDILALFKAADG-FGTLGALVNNAGIVGKSGVRVDEMSAERIQQMMAVNVTGSILCAR 122 E D+ LF + D FG L LVNNAG++ ++ R++ + A R+ ++ A NVTGS LCAR Sbjct: 63 EEGDVERLFASIDERFGRLDVLVNNAGML-EAQTRLENIDAARLHRVFATNVTGSFLCAR 121 Query: 123 EAVKRMSTRHGGQGGVIVNLSSVAAKLGAPNTYVDYAASKGAIDSFTIGLGYEVANEGIR 182 EAVKR+STRHGG+GG IVN+SS+A++LG+PN Y+DYAA+KGAIDS TIGL EVA EGIR Sbjct: 122 EAVKRLSTRHGGRGGSIVNVSSMASRLGSPNEYIDYAAAKGAIDSMTIGLAREVAAEGIR 181 Query: 183 VAGIRPGLIDTDIHAAGGEPDRAHRLAHMVPMKRVGTADEIANAIVWLISDEASYVTSAI 242 V +RPGLIDT+IHA+GGEP R RL +P+ R GTA+E+A AI+WL SDEASY T Sbjct: 182 VNAVRPGLIDTEIHASGGEPGRIERLKGGIPLGRGGTAEEVARAILWLASDEASYSTGTF 241 Query: 243 LDVSGGR 249 +DVSGGR Sbjct: 242 IDVSGGR 248 >RSc2504 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Rso Ralstonia solanacearum Length = 248 Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 141/247 (57%), Positives = 180/247 (72%), Gaps = 2/247 (0%) Query: 4 KVVVITGGSRGIGRATALAAAARGYRIVVGYASNKTAADEVVAAIEAKNGKAIAVKCDVG 63 K +VITGGSRGIGRATA+ A RG+ + + Y N+ AADE +E G+ +AV+ DV Sbjct: 3 KTIVITGGSRGIGRATAVLCARRGWSVAIQYRGNRQAADETAGLVEQAGGRLLAVQGDVS 62 Query: 64 SEQDILALFKAA-DGFGTLGALVNNAGIVGKSGVRVDEMSAERIQQMMAVNVTGSILCAR 122 SE D++ALF+AA D FG L +VNNAGIV + V +MSA+R++ + NV G+ L AR Sbjct: 63 SEADVMALFEAAQDRFGALHGVVNNAGIVAPA-QDVADMSAQRLRAIFETNVLGAFLVAR 121 Query: 123 EAVKRMSTRHGGQGGVIVNLSSVAAKLGAPNTYVDYAASKGAIDSFTIGLGYEVANEGIR 182 EA +R+ST GG GG +VN+SS AA+LG+P+ YVDYAASKGA+D+ T+GL E+ EG+R Sbjct: 122 EAARRLSTARGGAGGALVNVSSAAARLGSPHEYVDYAASKGAVDTMTLGLARELGREGVR 181 Query: 183 VAGIRPGLIDTDIHAAGGEPDRAHRLAHMVPMKRVGTADEIANAIVWLISDEASYVTSAI 242 V +RPGLIDT+IHA GG+PDRA RL PM R GTA E+A IVWL+SD ASYVT A+ Sbjct: 182 VNAVRPGLIDTEIHACGGQPDRAQRLGAATPMGRPGTAAEVAETIVWLLSDAASYVTGAL 241 Query: 243 LDVSGGR 249 LD SGGR Sbjct: 242 LDCSGGR 248 >VCA0301 [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Vch Vibrio cholerae Length = 250 Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 143/247 (57%), Positives = 176/247 (71%), Gaps = 2/247 (0%) Query: 3 DKVVVITGGSRGIGRATALAAAARGYRIVVGYASNKTAADEVVAAIEAKNGKAIAVKCDV 62 KVVVITGGSRGIG ATA A G+ + + Y SN AA+ +V I+A G IAV+ DV Sbjct: 4 QKVVVITGGSRGIGAATAKLFAQNGFSVCINYKSNAEAANTLVEEIKALGGHCIAVQADV 63 Query: 63 GSEQDILALFKAADG-FGTLGALVNNAGIVGKSGVRVDEMSAERIQQMMAVNVTGSILCA 121 E D++ LF+ D G + LVNNAGI+ K +R+DEMSAERI ++ NVTG LC Sbjct: 64 SKESDVVKLFETVDQELGVVSVLVNNAGILKKQ-MRLDEMSAERINSILINNVTGYFLCC 122 Query: 122 REAVKRMSTRHGGQGGVIVNLSSVAAKLGAPNTYVDYAASKGAIDSFTIGLGYEVANEGI 181 RE VKRMSTRHGG GGVIVN+SS AA+ G+PN Y+DYAASKGAID+ T GL EVA EGI Sbjct: 123 RETVKRMSTRHGGFGGVIVNVSSGAARTGSPNEYIDYAASKGAIDTLTKGLSLEVAAEGI 182 Query: 182 RVAGIRPGLIDTDIHAAGGEPDRAHRLAHMVPMKRVGTADEIANAIVWLISDEASYVTSA 241 RV +RPGLI TD+HA GGEPDR RL + +PM+R G DE+A AI WL S+++S+ T Sbjct: 183 RVNCVRPGLIYTDMHADGGEPDRIERLKNKIPMQRGGLPDEVAEAIYWLSSEKSSFSTGN 242 Query: 242 ILDVSGG 248 LD++GG Sbjct: 243 FLDLAGG 249