BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0134.0018.p (480 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mll4060 [C] COG0055 F0F1-type ATP synthase, beta subunit Mlo Mes... 806 0.0 SMc02501 [C] COG0055 F0F1-type ATP synthase, beta subunit Sme Si... 778 0.0 BMEI0251 [C] COG0055 F0F1-type ATP synthase, beta subunit Bme Br... 772 0.0 CC3447 [C] COG0055 F0F1-type ATP synthase, beta subunit Ccr Caul... 729 0.0 RC1235 [C] COG0055 F0F1-type ATP synthase, beta subunit Rco Rick... 727 0.0 >mll4060 [C] COG0055 F0F1-type ATP synthase, beta subunit Mlo Mesorhizobium loti Length = 477 Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/479 (84%), Positives = 427/479 (89%), Gaps = 4/479 (0%) Query: 2 ATAANQIGRVTQVTGAVVDVQFEGHLPAILNALETKNGGNRLVLEVAQHLGESTVRTIAM 61 A A +G+V QV GAVVDVQF HLPAILNALET N GNRLVLEVAQHLGE+TVR IAM Sbjct: 3 AKATGVVGKVRQVIGAVVDVQFGDHLPAILNALETTNVGNRLVLEVAQHLGENTVRCIAM 62 Query: 62 DITEGLVRGQEVTDTGEPIRVPVGEGTLGRIINVIGEPIDEAGPIKSDGLRAIHQEAPTY 121 D TEGLVRGQEV DTG PI VPVG G LGRIINVIGEP+DE GP+ + +R+IHQ APTY Sbjct: 63 DSTEGLVRGQEVRDTGAPITVPVGPGMLGRIINVIGEPVDEEGPVDAIEMRSIHQPAPTY 122 Query: 122 TDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVF 181 +QSTEA+IL+TGIKV+DLLAPYAKGGKIGLFGGAGVGKTVLIQELINN+AKAHGGYSVF Sbjct: 123 VEQSTEAQILITGIKVLDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVF 182 Query: 182 AGVGERTREGNDLYHEFIESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVGLTGLT 241 AGVGERTREGNDLYHEFIES VN SK ALV+GQMNEPPGARARVGLTGLT Sbjct: 183 AGVGERTREGNDLYHEFIESGVNKKGGGEG----SKAALVYGQMNEPPGARARVGLTGLT 238 Query: 242 VAEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT 301 VAE+FRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT Sbjct: 239 VAEYFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTT 298 Query: 302 QKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRMLS 361 KGSITSVQAIYVPADDLTDPAPATSFAHLDATT L+RAI+EKGIYPAVDPLDSTSRML Sbjct: 299 TKGSITSVQAIYVPADDLTDPAPATSFAHLDATTTLNRAIAEKGIYPAVDPLDSTSRMLD 358 Query: 362 ALVVGDEHYNTARMVQQILQRYKSLQDIIAILGMDELSEEDKLTVARARKVERFLSQPFH 421 +VVG+EHY AR VQ ILQRYKSLQDIIAILGMDELSEEDK TVARARK+ERFLSQPF Sbjct: 359 PMVVGEEHYAVARQVQSILQRYKSLQDIIAILGMDELSEEDKQTVARARKIERFLSQPFF 418 Query: 422 VAEVFTGSPGKFVDLADTIKGFRDLCQGKYDHLPEAAFYMVGTIEEAVEKGKKLAAEAA 480 VAEVFTG+PGK VDLADTIKGF+ LC G YDHLPEAAFYMVG IEEAVEK ++LAAEAA Sbjct: 419 VAEVFTGAPGKLVDLADTIKGFKGLCNGDYDHLPEAAFYMVGGIEEAVEKAQRLAAEAA 477 >SMc02501 [C] COG0055 F0F1-type ATP synthase, beta subunit Sme Sinorhizobium meliloti Length = 504 Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/467 (83%), Positives = 414/467 (88%), Gaps = 5/467 (1%) Query: 4 AANQIGRVTQVTGAVVDVQFE-GHLPAILNALETKNGGNRLVLEVAQHLGESTVRTIAMD 62 A +GRVTQV GAVVDV FE G LP ILNALET N GNRLVLEVAQHLGE++VRTIAMD Sbjct: 31 ATGAVGRVTQVIGAVVDVAFEEGQLPQILNALETDNNGNRLVLEVAQHLGENSVRTIAMD 90 Query: 63 ITEGLVRGQEVTDTGEPIRVPVGEGTLGRIINVIGEPIDEAGPIKSDGLRAIHQEAPTYT 122 TEGLVRGQ+V DTG PI VPVG+ TLGRI+NVIGEP+DEAGP+K+ RAIHQEAP Y Sbjct: 91 STEGLVRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQEAPAYV 150 Query: 123 DQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFA 182 DQSTEA+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLI ELINNVAKAHGGYSVFA Sbjct: 151 DQSTEAQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFA 210 Query: 183 GVGERTREGNDLYHEFIESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVGLTGLTV 242 GVGERTREGNDLYHE IES VN H SK ALV+GQMNEPPGARARV LTGLTV Sbjct: 211 GVGERTREGNDLYHEMIESGVNK--HGGGEG--SKAALVYGQMNEPPGARARVALTGLTV 266 Query: 243 AEHFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTTQ 302 AE FRD+GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG +QERITTT Sbjct: 267 AEQFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERITTTT 326 Query: 303 KGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRMLSA 362 KGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSR+I+EKGIYPAVDPLDSTSRML Sbjct: 327 KGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDP 386 Query: 363 LVVGDEHYNTARMVQQILQRYKSLQDIIAILGMDELSEEDKLTVARARKVERFLSQPFHV 422 ++VG+EHY +R VQ LQRYK+LQDIIAILGMDELSEEDK+ VARARK+ERFLSQPF V Sbjct: 387 MIVGEEHYEVSRKVQSTLQRYKALQDIIAILGMDELSEEDKIAVARARKIERFLSQPFFV 446 Query: 423 AEVFTGSPGKFVDLADTIKGFRDLCQGKYDHLPEAAFYMVGTIEEAV 469 AEVFTGSPGK V L DTIKGF+ L G+YDHLPEAAFYMVG+IEEAV Sbjct: 447 AEVFTGSPGKLVALEDTIKGFKGLVNGEYDHLPEAAFYMVGSIEEAV 493 >BMEI0251 [C] COG0055 F0F1-type ATP synthase, beta subunit Bme Brucella melitensis Length = 521 Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/456 (85%), Positives = 407/456 (89%), Gaps = 5/456 (1%) Query: 11 VTQVTGAVVDVQF-EGHLPAILNALETKNGGNRLVLEVAQHLGESTVRTIAMDITEGLVR 69 +TQV GAVVDV+F EG LP ILNALE N G+RLVLEVAQHLGE TVRTIAMD TEGLVR Sbjct: 55 ITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVR 114 Query: 70 GQEVTDTGEPIRVPVGEGTLGRIINVIGEPIDEAGPIKSDGLRAIHQEAPTYTDQSTEAE 129 GQE DTGEPI VPVG TLGRI+NVIGEP+DEAGPIK+ RAIHQ AP Y +QSTEAE Sbjct: 115 GQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAE 174 Query: 130 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTR 189 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLI ELINNVAKAHGGYSVFAGVGERTR Sbjct: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234 Query: 190 EGNDLYHEFIESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVGLTGLTVAEHFRDQ 249 EGNDLYHE IES VN SK ALV+GQMNEPPGARARV L+GLTVAE+FRDQ Sbjct: 235 EGNDLYHEMIESGVN----KLGGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQ 290 Query: 250 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTTQKGSITSV 309 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGA+QERITTT KGSITSV Sbjct: 291 GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERITTTTKGSITSV 350 Query: 310 QAIYVPADDLTDPAPATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRMLSALVVGDEH 369 QAIYVPADDLTDPAPATSFAHLDATTVLSR+I+EKGIYPAVDPLDSTSRML VVG+EH Sbjct: 351 QAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEH 410 Query: 370 YNTARMVQQILQRYKSLQDIIAILGMDELSEEDKLTVARARKVERFLSQPFHVAEVFTGS 429 Y AR VQ ILQRYK+LQDIIAILGMDELSEEDKLTVARARK+ERFLSQPF VAEVFTGS Sbjct: 411 YAVARQVQSILQRYKALQDIIAILGMDELSEEDKLTVARARKIERFLSQPFFVAEVFTGS 470 Query: 430 PGKFVDLADTIKGFRDLCQGKYDHLPEAAFYMVGTI 465 PGK VDLADTIKGF+ LC G YDHLPEAAFYMVG+I Sbjct: 471 PGKLVDLADTIKGFKGLCAGDYDHLPEAAFYMVGSI 506 >CC3447 [C] COG0055 F0F1-type ATP synthase, beta subunit Ccr Caulobacter vibrioides Length = 539 Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/465 (76%), Positives = 406/465 (87%), Gaps = 4/465 (0%) Query: 9 GRVTQVTGAVVDVQFEGHLPAILNALETKNG--GNRLVLEVAQHLGESTVRTIAMDITEG 66 GR+ Q+ GAVVD++F+G LPAILNA+ET N G RLV EVAQHLG+STVR IAMD TEG Sbjct: 65 GRLVQIIGAVVDIEFDGALPAILNAVETVNTATGQRLVFEVAQHLGQSTVRAIAMDATEG 124 Query: 67 LVRGQEVTDTGEPIRVPVGEGTLGRIINVIGEPIDEAGPIKSDGLRAIHQEAPTYTDQST 126 LVRGQ V DTGEPIRVPVG GTLGRI+NVIGEPIDE GPI+SD R IH++AP++ +Q+ Sbjct: 125 LVRGQPVRDTGEPIRVPVGPGTLGRIMNVIGEPIDEQGPIRSDISRTIHRDAPSFAEQTN 184 Query: 127 EAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGE 186 AE+LVTGIKV+DL+ PY KGGKIGLFGGAGVGKTV +QELINN+AKA+GGYSV AGVGE Sbjct: 185 TAEVLVTGIKVIDLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAGVGE 244 Query: 187 RTREGNDLYHEFIESKVNADPHNPDPSVK-SKCALVFGQMNEPPGARARVGLTGLTVAEH 245 RTREGNDLYHE IES VN DP + S + S+CALV+GQMNEPPGARARV LTGL++AE+ Sbjct: 245 RTREGNDLYHEMIESNVNVDPKANNGSTEGSRCALVYGQMNEPPGARARVALTGLSIAEY 304 Query: 246 FRDQ-GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTTQKG 304 FRD+ G+DVL FVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLAT+MG LQERIT+T KG Sbjct: 305 FRDEEGKDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERITSTNKG 364 Query: 305 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRMLSALV 364 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSR I+ + I+PAVDPLDSTSR++ LV Sbjct: 365 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMDPLV 424 Query: 365 VGDEHYNTARMVQQILQRYKSLQDIIAILGMDELSEEDKLTVARARKVERFLSQPFHVAE 424 +G+EHY AR VQ++LQ+YK+L+DIIAILGMDELSEEDKL VARARK++RFLSQPFHVAE Sbjct: 425 IGEEHYTVARRVQEVLQQYKALKDIIAILGMDELSEEDKLVVARARKIQRFLSQPFHVAE 484 Query: 425 VFTGSPGKFVDLADTIKGFRDLCQGKYDHLPEAAFYMVGTIEEAV 469 FT +PG FV L DTI+ F+ + G+YDHLPE AFYMVG IEEAV Sbjct: 485 QFTNTPGAFVQLKDTIRSFKGIVDGEYDHLPEGAFYMVGPIEEAV 529 >RC1235 [C] COG0055 F0F1-type ATP synthase, beta subunit Rco Rickettsia conorii Length = 499 Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/475 (76%), Positives = 405/475 (85%), Gaps = 12/475 (2%) Query: 7 QIGRVTQVTGAVVDVQF--EGHLPAILNALETKNGGNRLVLEVAQHLGESTVRTIAMDIT 64 IG++TQ+ AVVDV+F G LP ILNALE N R+VLEVAQH+G+ TVR IAMD Sbjct: 30 NIGKITQIISAVVDVKFTNNGELPKILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSM 89 Query: 65 EGLVRGQEVTDTGEPIRVPVGEGTLGRIINVIGEPIDEAGPIKSDGLRAIHQEAPTYTDQ 124 EGLVRG EV DTG PIR+PVG TLGRI+NV+GEPID G IKS + +I++ AP +T Q Sbjct: 90 EGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTHQ 149 Query: 125 STEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGV 184 STE ILVTGIKV+DLLAPY KGGKIGLFGGAGVGKTVLI ELINNVAKAHGGY+VFAGV Sbjct: 150 STECNILVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGV 209 Query: 185 GERTREGNDLYHEFIESKVN--ADPHNPDPSVKSKCALVFGQMNEPPGARARVGLTGLTV 242 GERTREGNDLYHE I+S V A+P KSK ALV+GQMNEPPGARARV L+GLT+ Sbjct: 210 GERTREGNDLYHEMIDSGVINLAEPE------KSKVALVYGQMNEPPGARARVALSGLTI 263 Query: 243 AEHFRD--QGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITT 300 AE FRD +GQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG LQERIT+ Sbjct: 264 AESFRDMNEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERITS 323 Query: 301 TQKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAISEKGIYPAVDPLDSTSRML 360 T+ GSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSR I+E GIYPAVDPLDS S++L Sbjct: 324 TKYGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVL 383 Query: 361 SALVVGDEHYNTARMVQQILQRYKSLQDIIAILGMDELSEEDKLTVARARKVERFLSQPF 420 ++VG+EHY+ AR VQQ+LQ YKSLQDII ILGMDELSEEDKLTVARARK++RFLSQPF Sbjct: 384 DPMIVGEEHYSVARQVQQVLQTYKSLQDIITILGMDELSEEDKLTVARARKIQRFLSQPF 443 Query: 421 HVAEVFTGSPGKFVDLADTIKGFRDLCQGKYDHLPEAAFYMVGTIEEAVEKGKKL 475 HVAEVFTG+ GKFV+LADTI GF+ L +GKYD LPEAAFYMVGTI+EA+EK + L Sbjct: 444 HVAEVFTGAAGKFVNLADTIAGFKGLVEGKYDDLPEAAFYMVGTIDEAIEKAQTL 498