BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0133.0040.p (569 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 199 2e-50 RSc2246 [E] COG0411 ABC-type branched-chain amino acid transport... 188 3e-47 mll4886 Non COG 185 2e-46 SP0752 [E] COG0411 ABC-type branched-chain amino acid transport ... 185 3e-46 RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport... 180 1e-44 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 99/225 (44%), Positives = 151/225 (67%), Gaps = 2/225 (0%) Query: 337 IDFTVNHGELRGIIGPNGAGKSTFFKMLTCEVHPTSGTILFEGRDITGMNVTDVCQLGLT 396 ++ V GE +IGPNGAGKST F +++ P+SG+I F+G +I G+ V + GL Sbjct: 25 VNLAVRDGERHAVIGPNGAGKSTLFHLISGNFTPSSGSIRFQGEEIGGLTPAAVNRKGLA 84 Query: 397 KSYQVNQLFAGLTVRENLVIASLSALRGKFKLDLFRSIDSIGGLSERVQQTLELVNLTSR 456 +S+Q+ +F GLTV EN+ +A + R K + +R + S+ ++ V+ LE V LT+R Sbjct: 85 RSFQITNIFPGLTVFENIRLAVMR--RYKVQFTFWRPVSSMRKVTAEVESLLEQVRLTAR 142 Query: 457 PDTPVSELAYGEKRRLEIGLALATSPSLLLLDEPLAGMSPRERVETVKLLKSISQGRTMI 516 T S+L+Y E+R LEIG+ LA+ P L++LDEP+AGMS E TV L++ I+Q RT++ Sbjct: 143 AYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMAGMSQEETDYTVGLIREITQNRTLM 202 Query: 517 IIDHDMDALFELAERVTVLQEGRVLVEGTPEEIKTNSTVQEAYLG 561 I++HDM +F LA+R++VL G ++ GTP+EI+ N+ V+EAYLG Sbjct: 203 IVEHDMYVVFTLADRISVLVYGEIIATGTPKEIRENARVREAYLG 247 >RSc2246 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 257 Score = 188 bits (478), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 101/253 (39%), Positives = 148/253 (58%), Gaps = 3/253 (1%) Query: 314 PSGPILQAKGQTKRYGGLLANSDIDFTVNHGELRGIIGPNGAGKSTFFKMLTCEVHPTSG 373 P P L G +KR+GG AN+DI T G +IGPNGAGK+TF +LT PT+G Sbjct: 7 PPAPTLSTHGLSKRWGGFHANADISLTFAPGAHHALIGPNGAGKTTFINLLTGAFAPTAG 66 Query: 374 TILFEGRDITGMNVTDVCQLGLTKSYQVNQLFAGLTVRENLVIASLSALRGKFKLDLFRS 433 + +G DIT ++ + G+T+++Q+N LF GLTV E++++A R R+ Sbjct: 67 QVRLDGDDITRLSAHQRVKRGITRTFQINTLFPGLTVLESVMLAIFE--RTGASWHWHRT 124 Query: 434 IDSIGGLSERVQQTLELVNLTSRPDTPVSELAYGEKRRLEIGLALATSPSLLLLDEPLAG 493 + + + L + L + +P L YG++R LEI LALAT P +LLLDEP AG Sbjct: 125 VAAHTAARDEAMALLGRLQLGADASSPTHALPYGKQRLLEIALALATLPRILLLDEPAAG 184 Query: 494 MSPRERVETVKLLKSISQGRTMIIIDHDMDALFELAERVTVLQEGRVLVEGTPEEIKTNS 553 + E E +++ + + T++ I+HDM+ +F AER++VL GRVL EGTP+EI + Sbjct: 185 IPAGESAELFEVIAGLPRDITILFIEHDMNLVFRFAERISVLVAGRVLTEGTPQEIAADP 244 Query: 554 TVQEAYLG-GVHG 565 V+E YLG HG Sbjct: 245 RVREVYLGEAAHG 257 >mll4886 Non COG Length = 241 Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 94/245 (38%), Positives = 147/245 (60%), Gaps = 9/245 (3%) Query: 317 PILQAKGQTKRYGGLLANSDIDFTVNHGELRGIIGPNGAGKSTFFKMLTCEVHPTSGTIL 376 P+L KG ++ +GGL A +DFT+ GE+R +IGPNGAGK+TF M++ + P+SG I+ Sbjct: 3 PLLATKGLSRNFGGLRAVDSVDFTLMPGEIRAVIGPNGAGKTTFVSMVSGRIQPSSGAIV 62 Query: 377 FEGRDITGMNVTDVCQLGLTKSYQVNQLFAGLTVRENLVIASLSALRGKFKLDLFRSIDS 436 F+G DIT + + G+ ++Q+ ++A L+V N+ + +L L R S Sbjct: 63 FDGADITSLPAYVRVRQGIAYTFQITSIYANLSVYANVAL--------PVQLTL-RHGPS 113 Query: 437 IGGLSERVQQTLELVNLTSRPDTPVSELAYGEKRRLEIGLALATSPSLLLLDEPLAGMSP 496 + V LE L R P +L+YG +R LE+ + LA P LL+LDEP G++ Sbjct: 114 KSAIQAAVMTALERTGLADRAHMPAGQLSYGHQRLLEVAMGLALKPRLLILDEPTQGLAD 173 Query: 497 RERVETVKLLKSISQGRTMIIIDHDMDALFELAERVTVLQEGRVLVEGTPEEIKTNSTVQ 556 E + L++ I+ T+++I+H+M + +LA+R+TV G++L EGTPE I+ N+ VQ Sbjct: 174 SEIDNFIVLVRDIASSATVLLIEHNMPVVMQLADRITVFNAGKILAEGTPEAIRENAAVQ 233 Query: 557 EAYLG 561 EAYLG Sbjct: 234 EAYLG 238 >SP0752 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 254 Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 104/254 (40%), Positives = 154/254 (60%), Gaps = 13/254 (5%) Query: 318 ILQAKGQTKRYGGLLANSDIDFTVNHGELRGIIGPNGAGKSTFFKMLTCEVHPTSGTILF 377 +L+ K TK +GGL A D+ +N GEL G+IGPNGAGK+T F +LT P+ GT+ Sbjct: 3 LLEVKQLTKHFGGLTAVGDVTLELNEGELVGLIGPNGAGKTTLFNLLTGVYEPSEGTVTL 62 Query: 378 EGRDITGMNVTDVCQLGLTKSYQVNQLFAGLTVRENLVIASLSALRGKFKLDLFRSI--- 434 +G + G + + LGL +++Q +LF LTV +N++I A K +F S Sbjct: 63 DGHLLNGKSPYKIASLGLGRTFQNIRLFKDLTVLDNVLI----AFGNHHKQHVFTSFLRL 118 Query: 435 ----DSIGGLSERVQQTLELVNLTSRPDTPVSELAYGEKRRLEIGLALATSPSLLLLDEP 490 S L + + L++ +L +T L+YG++RRLEI ALAT P +L LDEP Sbjct: 119 PAFYKSEKELKAKALELLKIFDLDGDAETLAKNLSYGQQRRLEIVRALATEPKILFLDEP 178 Query: 491 LAGMSPRERVETVKLLKSISQ--GRTMIIIDHDMDALFELAERVTVLQEGRVLVEGTPEE 548 AGM+P+E E +L++ I T+++I+HDM+ + E+ ER+ VL+ GR++ +GTP+E Sbjct: 179 AAGMNPQETAELTELIRRIKDEFKITIMLIEHDMNLVMEVTERIYVLEYGRLIAQGTPDE 238 Query: 549 IKTNSTVQEAYLGG 562 IKTN V EAYLGG Sbjct: 239 IKTNKRVIEAYLGG 252 >RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 256 Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 97/250 (38%), Positives = 149/250 (59%), Gaps = 2/250 (0%) Query: 318 ILQAKGQTKRYGGLLANSDIDFTVNHGELRGIIGPNGAGKSTFFKMLTCEVHPTSGTILF 377 IL+ +G TK + G A SD++ V G + +IGPNGAGK+T F +LT + PT GTILF Sbjct: 6 ILETRGLTKAFKGFTAVSDVNLRVRRGSIHALIGPNGAGKTTCFNLLTKFLVPTRGTILF 65 Query: 378 EGRDITGMNVTDVCQLGLTKSYQVNQLFAGLTVRENLVIASLSALRGKFKLDLFRSIDSI 437 G DIT + + G+ +S+Q++ +F L+V EN+ I L + +RS ++ Sbjct: 66 NGVDITPERPAQIARRGVIRSFQISAVFPHLSVLENVRIGLQRQLGTAYAF--WRSEKTL 123 Query: 438 GGLSERVQQTLELVNLTSRPDTPVSELAYGEKRRLEIGLALATSPSLLLLDEPLAGMSPR 497 L++R Q L+ V LT T EL YG KR LEI LA P L+LLDEP GM Sbjct: 124 AVLNDRAMQLLDQVGLTPFAGTVTVELPYGRKRALEIATTLAMEPELMLLDEPTQGMGHE 183 Query: 498 ERVETVKLLKSISQGRTMIIIDHDMDALFELAERVTVLQEGRVLVEGTPEEIKTNSTVQE 557 + +L++ +++GRT+++++H+M+ + +A+++TVLQ G++L EG E++ N V E Sbjct: 184 DVDRVTELIQRVAEGRTILMVEHNMNVVSSIADKITVLQRGQILAEGPYEDVSKNPQVME 243 Query: 558 AYLGGVHGVL 567 AY+G L Sbjct: 244 AYMGTADAAL 253