BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0133.0003.p         (97 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

msl2076 [L] COG2827 Predicted endonuclease containing a URI doma...    95   4e-20
msr4424 [L] COG2827 Predicted endonuclease containing a URI doma...    92   2e-19
SMc02088 [L] COG2827 Predicted endonuclease containing a URI dom...    86   2e-17
SMc00344 [L] COG2827 Predicted endonuclease containing a URI dom...    84   6e-17
CC3518 Non COG                                                         84   6e-17

>msl2076 [L] COG2827 Predicted endonuclease containing a URI domain Mlo
          Mesorhizobium loti
          Length = 95

 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/86 (58%), Positives = 58/86 (67%)

Query: 8  YVYILASRHHGTIYIGVTNDLRPRLELHRSGRGSKFVYQYQVFRLVHVEEFATPQEAIAR 67
          YVY+ AS+  GTIYIGVTNDL  R+  H+SG GS+F  QY V RLV  EE+    +AI R
Sbjct: 4  YVYMTASQKRGTIYIGVTNDLGRRMPEHKSGEGSRFTSQYGVQRLVWYEEYFDITDAIQR 63

Query: 68 EKQLKFWKRDWKIKLIEAENPDWNDL 93
          EK LK   R WKI LIE  NPDW +L
Sbjct: 64 EKSLKRRLRQWKIDLIEKANPDWFEL 89


>msr4424 [L] COG2827 Predicted endonuclease containing a URI domain Mlo
          Mesorhizobium loti
          Length = 95

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/86 (55%), Positives = 59/86 (68%)

Query: 8  YVYILASRHHGTIYIGVTNDLRPRLELHRSGRGSKFVYQYQVFRLVHVEEFATPQEAIAR 67
          YVY+ AS+  GTIYIGVTNDL  R+  H++G+GS F  +Y V RLV  EE     +AI R
Sbjct: 4  YVYMTASQKRGTIYIGVTNDLGRRVPEHKAGQGSNFTSRYGVQRLVWYEEHFDITDAIQR 63

Query: 68 EKQLKFWKRDWKIKLIEAENPDWNDL 93
          EK LK W R WKI+LIE  NP+W +L
Sbjct: 64 EKSLKRWPRLWKIELIEKANPEWFEL 89


>SMc02088 [L] COG2827 Predicted endonuclease containing a URI domain Sme
          Sinorhizobium meliloti
          Length = 94

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 53/86 (61%)

Query: 8  YVYILASRHHGTIYIGVTNDLRPRLELHRSGRGSKFVYQYQVFRLVHVEEFATPQEAIAR 67
          YVYI+ +   GT+YIGVT+DL  R+  HR G    F  +Y   RLV  EE      AI R
Sbjct: 4  YVYIVTNHKRGTLYIGVTSDLERRIFEHREGSTPGFASKYGCNRLVWYEEHLQIGTAIQR 63

Query: 68 EKQLKFWKRDWKIKLIEAENPDWNDL 93
          EK LK W R+WKI+LIE  NPDW DL
Sbjct: 64 EKSLKRWYREWKIELIEKMNPDWRDL 89


>SMc00344 [L] COG2827 Predicted endonuclease containing a URI domain Sme
          Sinorhizobium meliloti
          Length = 96

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 54/87 (62%)

Query: 8  YVYILASRHHGTIYIGVTNDLRPRLELHRSGRGSKFVYQYQVFRLVHVEEFATPQEAIAR 67
          YVYILAS+ +GT+Y GVT DL  RL  H++     F  +Y V  LV  EEF     AI R
Sbjct: 4  YVYILASKRNGTLYTGVTRDLPRRLLEHQNDLTPGFTSRYGVKTLVWFEEFDLLTSAITR 63

Query: 68 EKQLKFWKRDWKIKLIEAENPDWNDLS 94
          EK +K W R WK+ LIE  NP+W D+S
Sbjct: 64 EKTMKKWPRKWKLNLIEELNPEWEDIS 90


>CC3518 Non COG
          Length = 123

 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/89 (47%), Positives = 53/89 (59%)

Query: 9   VYILASRHHGTIYIGVTNDLRPRLELHRSGRGSKFVYQYQVFRLVHVEEFATPQEAIARE 68
           VY++A  + GT+Y GVT     R+  HR GRGS F  +Y + RLV  EE     EAI RE
Sbjct: 18  VYMMADHYRGTLYAGVTAQFITRITDHREGRGSAFTRRYGLTRLVWYEEHMLMTEAIQRE 77

Query: 69  KQLKFWKRDWKIKLIEAENPDWNDLSGLI 97
             +K W R WKI LIE +NP W+DL   +
Sbjct: 78  TSIKRWPRQWKINLIERDNPRWDDLYAAV 106