BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0132.0029.p (400 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0344 [E] COG0683 ABC-type branched-chain amino acid transpo... 407 e-113 AGl1462 [E] COG0683 ABC-type branched-chain amino acid transport... 402 e-111 SMc03121 [E] COG0683 ABC-type branched-chain amino acid transpor... 397 e-110 RSc3342 [E] COG0683 ABC-type branched-chain amino acid transport... 389 e-108 RSp1298 [E] COG0683 ABC-type branched-chain amino acid transport... 106 1e-22 >BMEII0344 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Bme Brucella melitensis Length = 401 Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust. Identities = 192/384 (50%), Positives = 264/384 (68%) Query: 17 TASAQISNDVVRIGVLTDLSSWGRDNSGPGSVEAAKMAVEEFGPTVLGKPIEIVSADHQM 76 +++A+IS+ V+IG+L D S D G S EAAKMA E+FG TVLG PIEI++ADHQ Sbjct: 18 SSAAEISDGKVKIGILNDQSGVYADFGGKWSYEAAKMAAEDFGGTVLGAPIEIITADHQN 77 Query: 77 KTDVGLQIVRDWFDNGKVDAVADIPNSGIAIAVHNMVRERNKIALLSGPGASSLTDELCS 136 K DV I R W+D +VD++ ++ S + +AV + +E+ KI + +G S LT + C+ Sbjct: 78 KPDVASNIARQWYDTEQVDSIMELTTSSVGLAVQALSKEKKKITINTGAATSELTGKQCT 137 Query: 137 PNTVHFSYDTYALSKVTASAVIKEGGKSWFFVTADYAFGQQLEKDATRFIKELDGKVLGN 196 P H++YDT+AL+ T +++++GG +W+F+TADYAFG LE+ T+F++ GKVLG+ Sbjct: 138 PYGFHWAYDTHALAVGTGGSLVQQGGDTWYFLTADYAFGYSLEEQTTKFVESKGGKVLGS 197 Query: 197 VRHPTNTADFSSFVLQAQNSKADVVAFANAGQDTDNAIKQSGEFGLVQAGQKLVGLLMFD 256 VRHP +T D+SSF+LQAQ S A VV ANAG DT NAIKQ+ EFG+V GQ+L LL Sbjct: 198 VRHPLSTTDYSSFLLQAQASGAKVVGLANAGLDTSNAIKQAAEFGIVAGGQRLAALLFTL 257 Query: 257 TDVHAVGLQAAQGTYMTTASYWNMDDKTRAWSKRFFTRTNVMPTMIHTGVYGSVLHYLKA 316 +VH +GL+AAQG +T YW+ DD++RA+ KRFF RT MP MI G Y +VL YLKA Sbjct: 258 AEVHGLGLEAAQGLTLTEGFYWDRDDESRAFGKRFFDRTGRMPNMIQAGTYSAVLQYLKA 317 Query: 317 IKTAGTDDPAAVMAKMRELPVENTFVHGARLREDGRVIRDMYLARVKKPSDSKEPWDYLE 376 IK AGTD+ AV K+ E+PVE+ F ++ +GR+I DMYL VKKP +SK PWDY + Sbjct: 318 IKEAGTDETEAVAKKLHEMPVEDVFARHGKVGPNGRMIYDMYLMEVKKPEESKAPWDYYK 377 Query: 377 IVKTIRGEDAYRPVSESKCALLKK 400 ++ TI G+ AY ES C L+K+ Sbjct: 378 VLATIPGDQAYMKPEESGCPLVKQ 401 >AGl1462 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 402 Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust. Identities = 188/380 (49%), Positives = 263/380 (69%) Query: 21 QISNDVVRIGVLTDLSSWGRDNSGPGSVEAAKMAVEEFGPTVLGKPIEIVSADHQMKTDV 80 +IS+ V+IG+L D S + G S EAAKMAVE+FG VLG P+E+V+ADHQ K DV Sbjct: 23 EISDGKVKIGILNDQSGVYANFGGKYSYEAAKMAVEDFGGKVLGAPVEVVTADHQNKADV 82 Query: 81 GLQIVRDWFDNGKVDAVADIPNSGIAIAVHNMVRERNKIALLSGPGASSLTDELCSPNTV 140 I R W+D +VD++ ++ +S + +AV + +++ KI + +G + LT + CSP Sbjct: 83 ASNIARQWYDTEQVDSIMELTSSSVGLAVQALSKDKKKITVNTGAATTELTGKQCSPYGF 142 Query: 141 HFSYDTYALSKVTASAVIKEGGKSWFFVTADYAFGQQLEKDATRFIKELDGKVLGNVRHP 200 H++YDTY+L+ T A++K+GG SWFF+TADYAFG LE++ + F+K GKVLG+VRHP Sbjct: 143 HWAYDTYSLAVGTGGALVKQGGDSWFFLTADYAFGYSLEENTSNFVKANGGKVLGSVRHP 202 Query: 201 TNTADFSSFVLQAQNSKADVVAFANAGQDTDNAIKQSGEFGLVQAGQKLVGLLMFDTDVH 260 T D+SSF+LQAQ+S A V+ ANAG DT NAIKQ+ EFG+V GQ+L LL +VH Sbjct: 203 LATTDYSSFLLQAQSSGAKVIGLANAGLDTSNAIKQASEFGIVAGGQRLAALLFTLAEVH 262 Query: 261 AVGLQAAQGTYMTTASYWNMDDKTRAWSKRFFTRTNVMPTMIHTGVYGSVLHYLKAIKTA 320 +GL+AAQG +T YW+ DD++R + +RF RT MP MIHTG Y +VLHYLKAI+ A Sbjct: 263 GLGLEAAQGLTLTEGFYWDRDDESRKFGERFKERTGAMPNMIHTGTYSAVLHYLKAIEKA 322 Query: 321 GTDDPAAVMAKMRELPVENTFVHGARLREDGRVIRDMYLARVKKPSDSKEPWDYLEIVKT 380 GTDD AV M+E+PV + F + +GR+I DMYL VKKP +SK+PWDY +++ T Sbjct: 323 GTDDADAVAKAMKEMPVNDVFAKDGHVAANGRMIHDMYLMEVKKPDESKQPWDYYKVLAT 382 Query: 381 IRGEDAYRPVSESKCALLKK 400 I G++A+ ++S C L+K+ Sbjct: 383 IPGKEAFMDPTKSGCPLVKQ 402 >SMc03121 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Sme Sinorhizobium meliloti Length = 401 Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust. Identities = 189/398 (47%), Positives = 267/398 (67%) Query: 2 KRNFLALAILVATASTASAQISNDVVRIGVLTDLSSWGRDNSGPGSVEAAKMAVEEFGPT 61 K+ LA+++A ++ A A S+ V+IG+L D S D G S EAA MAVE+FG Sbjct: 3 KKLIATLAMVLAGSTAALADASDGKVKIGILNDQSGVYADFGGKSSYEAALMAVEDFGGK 62 Query: 62 VLGKPIEIVSADHQMKTDVGLQIVRDWFDNGKVDAVADIPNSGIAIAVHNMVRERNKIAL 121 VLG P+E+V+ADHQ K D+ I R W+D +VD++ ++ S +A+AV + +E+ KI + Sbjct: 63 VLGVPVEVVTADHQNKPDIASNIARQWYDTEQVDSIMELTTSSVALAVQAISKEKKKIDI 122 Query: 122 LSGPGASSLTDELCSPNTVHFSYDTYALSKVTASAVIKEGGKSWFFVTADYAFGQQLEKD 181 ++G + LT + CSP H++YDT++L+ T A++K+GG SWFF+TADYAFG LE++ Sbjct: 123 VTGAATTELTGKQCSPYGFHWAYDTHSLAVGTGGALVKQGGDSWFFLTADYAFGYSLEEN 182 Query: 182 ATRFIKELDGKVLGNVRHPTNTADFSSFVLQAQNSKADVVAFANAGQDTDNAIKQSGEFG 241 ++KE G V+G VRHP T DFSSF+LQAQ+S A V+ ANAG DT NAIKQ+ EFG Sbjct: 183 TGNYVKENGGTVVGAVRHPLATTDFSSFLLQAQSSGAKVIGLANAGLDTSNAIKQAAEFG 242 Query: 242 LVQAGQKLVGLLMFDTDVHAVGLQAAQGTYMTTASYWNMDDKTRAWSKRFFTRTNVMPTM 301 +VQ GQ+L LL +VH +GL AAQG +T YWN D+++ + KRF RT MP M Sbjct: 243 IVQGGQRLAALLFTLAEVHGLGLDAAQGLTLTEGFYWNRDEESAKFGKRFMERTGKMPNM 302 Query: 302 IHTGVYGSVLHYLKAIKTAGTDDPAAVMAKMRELPVENTFVHGARLREDGRVIRDMYLAR 361 +H G Y +VL YLKAI+ AGTD+ AV ++ LPV++ F + +GR+I DMYL Sbjct: 303 VHAGTYSAVLQYLKAIEKAGTDETEAVAKELHALPVDDVFAKNGTVAPNGRMIHDMYLLE 362 Query: 362 VKKPSDSKEPWDYLEIVKTIRGEDAYRPVSESKCALLK 399 VKKP +SKEPWDY +++ TI G++A+ ++S C L+K Sbjct: 363 VKKPDESKEPWDYFKVLATIPGKEAFIDPAQSGCELVK 400 >RSc3342 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Rso Ralstonia solanacearum Length = 402 Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/399 (47%), Positives = 271/399 (67%), Gaps = 6/399 (1%) Query: 6 LALAILVA----TASTASAQISNDVVRIGVLTDLSSWGRDNSGPGSVEAAKMAVEEFGPT 61 LA A++ A AS A AQ+S D V+IG +TDLS D G G VEA KMA+E+ G Sbjct: 6 LAGALMAAGLGLAASGAHAQVSGDKVKIGYITDLSGLYADIDGQGGVEAVKMAIEDEGGK 65 Query: 62 VLGKPIEIVSADHQMKTDVGLQIVRDWFDNGKVDAVADIPNSGIAIAVHNMVRERNKIAL 121 VLGKPIE+V+ADHQ K D+ R+W D +D + NS ++A+ + E+ ++ + Sbjct: 66 VLGKPIELVTADHQNKADIAASKAREWMDQQGLDMLVGGTNSATSLAMSKVAAEKKRVFI 125 Query: 122 LSGPGASSLTDELCSPNTVHFSYDTYALSKVTASAVIKEGGKSWFFVTADYAFGQQLEKD 181 G G + LT+E C+P T+H++YDT AL+K T SAV+K+GGKSWFF+TADYAFG LE D Sbjct: 126 GIGAGTARLTNEECTPYTIHYAYDTVALAKGTGSAVVKQGGKSWFFLTADYAFGHSLEND 185 Query: 182 ATRFIKELDGKVLGNVRHPTNTADFSSFVLQAQNSKADVVAFANAGQDTDNAIKQSGEFG 241 +K G V+G+V+HP + +DFSS++LQAQ SKA ++ ANAG DT N+IK + EFG Sbjct: 186 TAAVVKANGGTVVGSVKHPLSASDFSSYLLQAQASKAQILGLANAGGDTINSIKAAKEFG 245 Query: 242 LVQAGQKLVGLLMFDTDVHAVGLQAAQGTYMTTASYWNMDDKTRAWSKRFFTRTNVMPTM 301 + + K+ GLLMF DVH++GLQ A+G MT + YW+M+D TR ++ R+F++ MP+ Sbjct: 246 ITKT-MKIAGLLMFINDVHSLGLQTAEGLLMTDSWYWDMNDATRKFATRYFSKMKKMPSS 304 Query: 302 IHTGVYGSVLHYLKAIKTAGTDDPAAVMAKMRELPVENTFVHGARLREDGRVIRDMYLAR 361 + Y +V +Y+KA+ AGTDDP V+A++++ + + F G +R DGR + DMYL + Sbjct: 305 LQAADYSAVSNYIKAVAAAGTDDPDKVIAQLKKTQLNDFFSKGT-IRADGRYVHDMYLMQ 363 Query: 362 VKKPSDSKEPWDYLEIVKTIRGEDAYRPVSESKCALLKK 400 VK P++SK+PWDY++IV TI G+ A+ +ESKC LLKK Sbjct: 364 VKTPAESKKPWDYMKIVATIPGDQAFTTPAESKCPLLKK 402 >RSp1298 [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component Rso Ralstonia solanacearum Length = 391 Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 4/233 (1%) Query: 48 VEAAKMAVEEFGPT--VLGKPIEIVSADHQMKTDVGLQIVRDWFDNGKVDAVADIPNSGI 105 V A++AV + +LG+PIE++ D G+Q R + +V + NSGI Sbjct: 60 VTGARLAVAQINARGGILGRPIELLVEDSANDVGTGVQKARKLIERDQVSFLIGDVNSGI 119 Query: 106 AIAVHNMVRERNKIALLSGPGASSLTDELCSPNTVHFSYDTYALSKVTASAVIKEGGKSW 165 A A+ + E+ + ++SG ++T C N T + A+ + + GK W Sbjct: 120 AQAIAQVSNEKKVLHIVSGGHTDTITGSDCKWNVYRVCNTTSMEANAVANLLFSKYGKKW 179 Query: 166 FFVTADYAFGQQLEKDATRFIKELDGKVLGNVRHPTNTADFSSFVLQAQNSKADVVAFAN 225 F+T DYAFG L+K A +++L G + GN P T DFS+++++A+ + DV+ Sbjct: 180 HFITPDYAFGHTLQKAAAADLQKLGGTITGNELTPLGTTDFSAYLIKARAANPDVLLVLP 239 Query: 226 AGQDTDNAIKQSGEFGLVQAGQKLVGLLMFDTDVHAVGLQAAQGTYMTTASYW 278 G D N +KQ +FG+ + + GL + A+ +A G +M YW Sbjct: 240 QGSDMVNCLKQIAQFGIGKQ-MHIAGLQQELESLEAMPPEARVGIWMFE-WYW 290