BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0131.0013.p         (68 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl1462 [E] COG0683 ABC-type branched-chain amino acid transport...    79   4e-15
BMEII0344 [E] COG0683 ABC-type branched-chain amino acid transpo...    77   8e-15
SMc03121 [E] COG0683 ABC-type branched-chain amino acid transpor...    75   4e-14
RSc3342 [E] COG0683 ABC-type branched-chain amino acid transport...    73   2e-13

>AGl1462 [E] COG0683 ABC-type branched-chain amino acid transport systems,
           periplasmic component Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 402

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)

Query: 1   MREKPVEDFFARNGKLREDNLMVHDLWLVQVKTPAESKYPWDYYKILAKISGEDAF-GPP 59
           M+E PV D FA++G +  +  M+HD++L++VK P ESK PWDYYK+LA I G++AF  P 
Sbjct: 334 MKEMPVNDVFAKDGHVAANGRMIHDMYLMEVKKPDESKQPWDYYKVLATIPGKEAFMDPT 393

Query: 60  DPACAMAKK 68
              C + K+
Sbjct: 394 KSGCPLVKQ 402


>BMEII0344 [E] COG0683 ABC-type branched-chain amino acid transport systems,
           periplasmic component Bme Brucella melitensis
          Length = 401

 Score = 77.4 bits (189), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)

Query: 1   MREKPVEDFFARNGKLREDNLMVHDLWLVQVKTPAESKYPWDYYKILAKISGEDAF-GPP 59
           + E PVED FAR+GK+  +  M++D++L++VK P ESK PWDYYK+LA I G+ A+  P 
Sbjct: 333 LHEMPVEDVFARHGKVGPNGRMIYDMYLMEVKKPEESKAPWDYYKVLATIPGDQAYMKPE 392

Query: 60  DPACAMAKK 68
           +  C + K+
Sbjct: 393 ESGCPLVKQ 401


>SMc03121 [E] COG0683 ABC-type branched-chain amino acid transport systems,
           periplasmic component Sme Sinorhizobium meliloti
          Length = 401

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)

Query: 5   PVEDFFARNGKLREDNLMVHDLWLVQVKTPAESKYPWDYYKILAKISGEDAF-GPPDPAC 63
           PV+D FA+NG +  +  M+HD++L++VK P ESK PWDY+K+LA I G++AF  P    C
Sbjct: 337 PVDDVFAKNGTVAPNGRMIHDMYLLEVKKPDESKEPWDYFKVLATIPGKEAFIDPAQSGC 396

Query: 64  AMAK 67
            + K
Sbjct: 397 ELVK 400


>RSc3342 [E] COG0683 ABC-type branched-chain amino acid transport systems,
           periplasmic component Rso Ralstonia solanacearum
          Length = 402

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 2/69 (2%)

Query: 1   MREKPVEDFFARNGKLREDNLMVHDLWLVQVKTPAESKYPWDYYKILAKISGEDAF-GPP 59
           +++  + DFF++ G +R D   VHD++L+QVKTPAESK PWDY KI+A I G+ AF  P 
Sbjct: 335 LKKTQLNDFFSK-GTIRADGRYVHDMYLMQVKTPAESKKPWDYMKIVATIPGDQAFTTPA 393

Query: 60  DPACAMAKK 68
           +  C + KK
Sbjct: 394 ESKCPLLKK 402