BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0131.0010.p         (209 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PAB2014 [H] COG0303 Molybdopterin biosynthesis enzyme Pab Pyroco...    80   4e-15
PAB1436 [H] COG0303 Molybdopterin biosynthesis enzyme Pab Pyroco...    76   7e-14
AF0930 [H] COG0303 Molybdopterin biosynthesis enzyme Afu Archaeo...    72   1e-12
MA4087 [H] COG0303 Molybdopterin biosynthesis enzyme Mac Methano...    68   2e-11
PH0582 [H] COG0303 Molybdopterin biosynthesis enzyme Pho Pyrococ...    63   4e-10

>PAB2014 [H] COG0303 Molybdopterin biosynthesis enzyme Pab Pyrococcus abyssi
          Length = 395

 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 10  SLTPLDAALAAVLRDVGPVQPIALQPADAL--RCIAAEMPALRAYPPHDVAVSDGWAMRA 67
            L P   AL  +L DV  +Q +   P D    R +A ++ +    PP D +  DG+A+RA
Sbjct: 5   KLMPYREALTLLLNDVTEIQDVEHVPLDEALNRVLAQDIISEFDVPPFDRSAVDGYAVRA 64

Query: 68  NDLVGASSYAPLPL--------AEPP---------VWVAAGAAMPEGSDCVVDADAVDTS 110
            D   A  Y+P+ L         E P         + V  GA +PEG++ V+  + V   
Sbjct: 65  EDTFQAREYSPIELKVIEEVPAGESPKMKVTSGTAIKVLTGAKIPEGANAVIMQEMVKRE 124

Query: 111 GPLPQVLAEAIPGQGVRRAGSDIAVGRTVIAAGEPLLPRGLLLARAAGLQMLRV-RRPRL 169
           G    VL    PGQ V   G D+  G  ++  G  L P+ L + +A G++ + V R+PR+
Sbjct: 125 GEKIYVLRPVAPGQNVAFKGEDVKKGEVILRKGTILRPQDLAMLKALGIKSVPVKRKPRV 184

Query: 170 CIVNVANGELTAQ 182
            I+ +   EL  +
Sbjct: 185 GII-ITGSELVEE 196


>PAB1436 [H] COG0303 Molybdopterin biosynthesis enzyme Pab Pyrococcus abyssi
          Length = 402

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 19/186 (10%)

Query: 10  SLTPLDAALAAVLRDVGPVQPIALQPADAL-RCIAAEMPALRAYPPHDVAVSDGWAMRAN 68
            + PL+ AL  V     P+    ++ ++AL R +A ++ +    PP D A  DG+A+RA 
Sbjct: 5   KVVPLERALEIVNSFTLPLGTEEVKLSEALGRIVAEDIYSPIDIPPFDRATVDGYAVRAE 64

Query: 69  DLVGASSYAPLPL--------AEPP---------VWVAAGAAMPEGSDCVVDADAVDTSG 111
           D   AS   P+ L         E P         V+++ GA +P+ +D V+  + V+  G
Sbjct: 65  DTFMASEANPIKLKVVGEIHAGEEPKLELKKGETVYISTGAMLPKNADAVIQFEDVERVG 124

Query: 112 PLPQVLAEAIPGQGVRRAGSDIAVGRTVIAAGEPLLPRGLLLARAAGLQMLRV-RRPRLC 170
               +   A PG GV + G DI+ GR ++  GE L  +   L  A G++ +RV R+P++ 
Sbjct: 125 DEIIIYKPAYPGLGVMKKGVDISKGRLLVRKGERLGFKQTALLSAVGVERVRVFRKPKVA 184

Query: 171 IVNVAN 176
           I++  N
Sbjct: 185 IISTGN 190


>AF0930 [H] COG0303 Molybdopterin biosynthesis enzyme Afu Archaeoglobus
           fulgidus
          Length = 414

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 20/176 (11%)

Query: 40  RCIAAEMPALRAYPPHDVAVSDGWAMRANDLVGASSYAPLPL--------AEPP------ 85
           R +A ++ A    P  + A  DG+A++A D  GAS   P+ L         E P      
Sbjct: 40  RVLAEDIVAGFDVPKFNRAAMDGYAVKAEDTFGASVSNPIMLQLAGSVEIGEVPKVVVES 99

Query: 86  ---VWVAAGAAMPEGSDCVVDADAVDTSGPLPQVLAEAIPGQGVRRAGSDIAVGRTVIAA 142
              V +  GA MPEG++ VV  +    +G   +VL    P + V R G DIA G  V   
Sbjct: 100 GMAVRIMTGAMMPEGTNAVVMLEHTRLNGNFVEVLKSVTPMKNVSRVGEDIAAGEVVFRK 159

Query: 143 GEPLLPRGLLLARAAGLQMLRV-RRPRLCIVNVAN--GELTAQLXLRSSSSSRHPM 195
           GE L P+   +  + G++ +RV R+PR+ ++   N   E+   L      +S +PM
Sbjct: 160 GEILQPQDAGVIASLGIESVRVYRKPRVAVITTGNELAEVGEPLEGAKIYNSNNPM 215


>MA4087 [H] COG0303 Molybdopterin biosynthesis enzyme Mac Methanosarcina
           acetivorans str.C2A
          Length = 397

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 9/186 (4%)

Query: 6   RLPPSLTPLDAALAAVLRDVGPVQPIALQPADAL--RCIAAEMPALRAYPPHDVAVSDGW 63
           R+    T +D AL   L ++ P++     P +A   R +A  + + R  P +  A  DG+
Sbjct: 3   RIFKERTSVDEALQLFLENISPLRHAEEVPLEACTGRVLAETVVSGRDIPHYRRAAMDGY 62

Query: 64  AMRANDLVGASSYAPLPL-------AEPPVWVAAGAAMPEGSDCVVDADAVDTSGPLPQV 116
           A+RA D  GAS   P+ L           +WV  GAA+PEG+D VV  +   T G + ++
Sbjct: 63  AVRAADTPGASPANPVLLQLSDSIEEGTSMWVHTGAALPEGADAVVMVEDTVTVGDMVEI 122

Query: 117 LAEAIPGQGVRRAGSDIAVGRTVIAAGEPLLPRGLLLARAAGLQMLRVRRPRLCIVNVAN 176
            A+  PG+ V + G DI     V   G  L P    +  + GL  ++V R  L  V    
Sbjct: 123 RAQVYPGRNVGQIGEDIRKEELVFKEGHLLRPCDAAVLASLGLDRVKVFRKPLVAVIPTG 182

Query: 177 GELTAQ 182
            EL ++
Sbjct: 183 DELISR 188


>PH0582 [H] COG0303 Molybdopterin biosynthesis enzyme Pho Pyrococcus
           horikoshii
          Length = 402

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 18/142 (12%)

Query: 53  PPHDVAVSDGWAMRANDLVGASSYAPLPLA---------EPPV--------WVAAGAAMP 95
           PP D A  DG+A+RA D   AS  +P+ L          EP          +++ GA +P
Sbjct: 49  PPFDRATVDGYAVRAEDTFMASEASPVRLKVIGSVHAGEEPKFKLGKGEAAYISTGAMLP 108

Query: 96  EGSDCVVDADAVDTSGPLPQVLAEAIPGQGVRRAGSDIAVGRTVIAAGEPLLPRGLLLAR 155
             +D V+  + V+       +   A PG GV + G DI  GR ++  GE L  +   L  
Sbjct: 109 GNADAVIQFEDVERVNGEILIYKPAYPGLGVMKKGIDIEKGRLLVKKGERLGFKQTALLS 168

Query: 156 AAGLQMLRV-RRPRLCIVNVAN 176
           A G+  ++V R+P++ +++  N
Sbjct: 169 AVGINKVKVFRKPKVAVISTGN 190