BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0130.0004.p (252 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2255 [K] COG1414 Transcriptional regulator Rso Ralstonia sola... 174 2e-43 mlr4184 [K] COG1414 Transcriptional regulator Mlo Mesorhizobium ... 160 3e-39 Cgl2340 [K] COG1414 Transcriptional regulator Cgl Corynebacteriu... 156 4e-38 SMb20586 [K] COG1414 Transcriptional regulator Sme Sinorhizobium... 155 7e-38 BMEII0642 [K] COG1414 Transcriptional regulator Bme Brucella mel... 142 5e-34 >RSc2255 [K] COG1414 Transcriptional regulator Rso Ralstonia solanacearum Length = 275 Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 93/221 (42%), Positives = 141/221 (63%), Gaps = 6/221 (2%) Query: 31 ADTAGLNRATARRILATLVALKYCASDGRYFSLRPRALGLGLSYLNALPYWGHAQRALEN 90 A+ GL RA ARRIL TLV+L Y + +GR F L PR L LG +YL ++P+W A+ +E Sbjct: 54 AEATGLTRAGARRILLTLVSLGYVSFEGRLFRLTPRILDLGFAYLTSMPFWNLAEPVMEE 113 Query: 91 LRNEIGESCAMAVLDEDEIVYALRLPARRILSANLGVGSRLPAHLVSLGRVMLAALPPGT 150 L + ESC+ +VLD EIVY LR+P ++I++ NL VGSRLPA S+GRV+L+ LP Sbjct: 114 LVQTVHESCSASVLDGTEIVYVLRVPTQKIIALNLSVGSRLPAFCTSMGRVLLSGLPEDR 173 Query: 151 REAYLATGGFRQVTPRTVTDPERLGELLARVESDGYAWVDGELDPAICGIAVPLRDPAGA 210 + L R T RT+T+ + L +++A V + G+A VD EL+ + ++ P+R+ AG Sbjct: 174 LDIVLRESDRRPRTQRTITEVDALKDVIAGVRAQGWALVDQELEEGLISLSTPIRNRAGD 233 Query: 211 VVAALSVNTISGTVSEAGARK---KYLLPLRRTAQEIRSQM 248 ++AA++ ISG + AR+ ++L PL++ A+ I S + Sbjct: 234 IIAAMN---ISGQANRTSARQMTRQFLGPLQQAAERISSMV 271 >mlr4184 [K] COG1414 Transcriptional regulator Mlo Mesorhizobium loti Length = 256 Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 89/214 (41%), Positives = 126/214 (58%) Query: 31 ADTAGLNRATARRILATLVALKYCASDGRYFSLRPRALGLGLSYLNALPYWGHAQRALEN 90 A+ AGL RA ARR L TLVA Y DGR FSL PR L + ++L W A + Sbjct: 37 AEQAGLTRAGARRFLLTLVATGYATQDGRMFSLSPRLLAVARTWLGGGSLWSFAAPIMRT 96 Query: 91 LRNEIGESCAMAVLDEDEIVYALRLPARRILSANLGVGSRLPAHLVSLGRVMLAALPPGT 150 + ++ E+C+ A+L ++VY R+P RRILS +L VG+RLPA+ S+GR++LA L P Sbjct: 97 VAAQLNEACSAAILSGQDVVYVARIPGRRILSVSLDVGTRLPAYCTSMGRMLLAGLAPEE 156 Query: 151 REAYLATGGFRQVTPRTVTDPERLGELLARVESDGYAWVDGELDPAICGIAVPLRDPAGA 210 + +L + TP+T+TD L E + + +DG+A VD EL+ + IAVP+RD AG Sbjct: 157 LDEFLHQATIERRTPKTITDIGLLAEAIGKARADGFAIVDEELELGLRSIAVPIRDRAGN 216 Query: 211 VVAALSVNTISGTVSEAGARKKYLLPLRRTAQEI 244 VAA++V+T S S A ++ L L Q I Sbjct: 217 TVAAINVSTQSARFSVAEMEREILPALLEARQRI 250 >Cgl2340 [K] COG1414 Transcriptional regulator Cgl Corynebacterium glutamicum Length = 255 Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 128/218 (58%) Query: 31 ADTAGLNRATARRILATLVALKYCASDGRYFSLRPRALGLGLSYLNALPYWGHAQRALEN 90 A GL+RATARR L TL L Y ++ F L PR L LG SYL+AL AQ LE Sbjct: 35 ASQTGLSRATARRFLHTLTDLGYAVNNDSRFQLTPRVLELGASYLSALSLPAIAQPRLEV 94 Query: 91 LRNEIGESCAMAVLDEDEIVYALRLPARRILSANLGVGSRLPAHLVSLGRVMLAALPPGT 150 L ++GES +M+VLD +I+Y R+P RRI++ N+ +G+R PA+ S+GR+MLA LP Sbjct: 95 LSRQVGESSSMSVLDGTDIIYVCRVPVRRIMTVNITIGTRFPAYATSMGRIMLANLPEEE 154 Query: 151 REAYLATGGFRQVTPRTVTDPERLGELLARVESDGYAWVDGELDPAICGIAVPLRDPAGA 210 + LA Q+T R++T + E + G++ VD EL+P + +A P+ + G Sbjct: 155 LDEMLAAAPPEQLTTRSLTSIASIREEIIATRERGWSLVDQELEPGLRSLAAPITNAQGE 214 Query: 211 VVAALSVNTISGTVSEAGARKKYLLPLRRTAQEIRSQM 248 VVA+++V+T S + S RK L L TAQ I + + Sbjct: 215 VVASINVSTQSASHSVEDIRKLVLPQLLETAQAISTDL 252 >SMb20586 [K] COG1414 Transcriptional regulator Sme Sinorhizobium meliloti Length = 251 Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 92/215 (42%), Positives = 124/215 (57%) Query: 31 ADTAGLNRATARRILATLVALKYCASDGRYFSLRPRALGLGLSYLNALPYWGHAQRALEN 90 A GL+RAT RR L TL L Y DG++F+L P+ L LG +YL+A P Q L+ Sbjct: 33 AKITGLDRATVRRSLLTLSQLGYADYDGKFFTLTPKTLRLGHAYLSATPLPTIVQPYLDQ 92 Query: 91 LRNEIGESCAMAVLDEDEIVYALRLPARRILSANLGVGSRLPAHLVSLGRVMLAALPPGT 150 L + G+S + +VLD EIVY R RR++S NL GSRLPA+ S+GRV+LAALP Sbjct: 93 LAEKAGQSASASVLDGTEIVYVARASQRRVMSINLTPGSRLPAYCASMGRVLLAALPEAE 152 Query: 151 REAYLATGGFRQVTPRTVTDPERLGELLARVESDGYAWVDGELDPAICGIAVPLRDPAGA 210 L + TP T TDPE L L RV +GYA +D EL+ +C IAVP+ + G Sbjct: 153 AREILGRSELKANTPLTRTDPEELLTELRRVRDEGYAIIDQELELGLCSIAVPVANDRGQ 212 Query: 211 VVAALSVNTISGTVSEAGARKKYLLPLRRTAQEIR 245 V+AAL++ + V +++L LR T +R Sbjct: 213 VLAALNIGASAAHVPAREMAERFLPLLRETQAALR 247 >BMEII0642 [K] COG1414 Transcriptional regulator Bme Brucella melitensis Length = 256 Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 89/218 (40%), Positives = 120/218 (55%) Query: 31 ADTAGLNRATARRILATLVALKYCASDGRYFSLRPRALGLGLSYLNALPYWGHAQRALEN 90 + GL+RATARR L TL L Y DG++F L PR L LG +YL+ P Q L+ Sbjct: 33 SKITGLDRATARRCLLTLAELGYAEYDGKFFMLLPRILRLGHAYLSGTPLPTIIQPHLDR 92 Query: 91 LRNEIGESCAMAVLDEDEIVYALRLPARRILSANLGVGSRLPAHLVSLGRVMLAALPPGT 150 L +GES + +VLD EIVY R R++S NL GSRLPA+ S+GRV+LA L Sbjct: 93 LSQSVGESASASVLDGAEIVYIARASQMRVISINLMAGSRLPAYCASMGRVLLAWLDESE 152 Query: 151 REAYLATGGFRQVTPRTVTDPERLGELLARVESDGYAWVDGELDPAICGIAVPLRDPAGA 210 L R TP T DPE+L E L R+ + G+A D EL+ + IAVP+ + GA Sbjct: 153 ARTILEQTELRARTPFTQKDPEKLMEELRRIRAQGFAVNDQELELGLRSIAVPVFNHRGA 212 Query: 211 VVAALSVNTISGTVSEAGARKKYLLPLRRTAQEIRSQM 248 VVAAL++ V + + L + + E+RS + Sbjct: 213 VVAALNIGAPVAHVEVSDLVGRILPEMLKIQSELRSML 250