BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0077.p (295 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA5429 [E] COG1027 Aspartate ammonia-lyase Pae Pseudomonas aerug... 300 3e-81 AGl2078 [E] COG1027 Aspartate ammonia-lyase Atu Agrobacterium tu... 287 2e-77 BMEI0109 Non COG 277 2e-74 Cj0087 [E] COG1027 Aspartate ammonia-lyase Cje Campylobacter jejuni 270 3e-72 aspA [E] COG1027 Aspartate ammonia-lyase Eco Escherichia coli K12 268 2e-71 >PA5429 [E] COG1027 Aspartate ammonia-lyase Pae Pseudomonas aeruginosa Length = 474 Score = 300 bits (768), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 154/252 (61%), Positives = 183/252 (72%), Gaps = 2/252 (0%) Query: 40 AQSRTEHDLLGEDDVPANALWGIHTKRAVMNFPITGVPVGHFPEFVRALALVKQAAARAN 99 A SR E DLLG +VPA+A +GI T RAV NF ++GVP+ H+P+ V ALA+VKQAAA AN Sbjct: 5 ASSRIEKDLLGTLEVPADAYYGIQTLRAVNNFRLSGVPLSHYPKLVVALAMVKQAAADAN 64 Query: 100 KRLGYLAPEKADAIEAACTQIATEKVYAESFVVDAIQGGAGTSTNMNANEVIANVALRLM 159 ++LG+L +K AI AC ++ + E FVVD IQGGAGTSTNMNANEVIAN+AL M Sbjct: 65 RQLGHLPEDKHAAISEACARLIRGD-FHEQFVVDMIQGGAGTSTNMNANEVIANIALEAM 123 Query: 160 GRKPGDYHALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVRALDDLAYSLKGKAVEFA 219 G G+Y LHPN+DVNMAQSTNDAYPTA+RL ++ L+ +LD L + K VEFA Sbjct: 124 GHTKGEYKYLHPNNDVNMAQSTNDAYPTAIRLGLLLGHDTLLASLDSLIQAFAAKGVEFA 183 Query: 220 DVLKMGRTQLQDAVPMTLGQEFDAFHVTVKEDVARLNEIS-ALFREVNLGATAIGTGINA 278 VLKMGRTQLQDAVPMTLGQEF AF T+ ED+ RL ++ L EVNLG TAIGTGINA Sbjct: 184 GVLKMGRTQLQDAVPMTLGQEFHAFATTLGEDLDRLRRLAPELLTEVNLGGTAIGTGINA 243 Query: 279 DPRYAALAXSRW 290 DP Y LA R Sbjct: 244 DPGYQKLAVERL 255 >AGl2078 [E] COG1027 Aspartate ammonia-lyase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 481 Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 147/245 (60%), Positives = 176/245 (71%), Gaps = 1/245 (0%) Query: 42 SRTEHDLLGEDDVPANALWGIHTKRAVMNFPITGVPVGHFPEFVRALALVKQAAARANKR 101 +R EHDLLG ++PA+ WG+HT RAV NF ITGV +GH P VR LA VK+AAARAN Sbjct: 8 TRREHDLLGTKEIPADVYWGVHTARAVENFKITGVTIGHNPYLVRGLAYVKEAAARANHE 67 Query: 102 LGYLAPEKADAIEAACTQIATEKVYAESFVVDAIQGGAGTSTNMNANEVIANVALRLMGR 161 LG L E+ +AI AC +I ++ E FVVD IQGGAGTSTNMNANEVI+N AL L+G Sbjct: 68 LGLLDKERMEAIAEACREIRAGALH-EQFVVDEIQGGAGTSTNMNANEVISNRALELLGH 126 Query: 162 KPGDYHALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVRALDDLAYSLKGKAVEFADV 221 + GDY LHPND VN++QSTNDAYPTA+ + +I A L ++ L + KA EFA Sbjct: 127 EKGDYSRLHPNDHVNLSQSTNDAYPTAINVGLIEAIDDLAVSMGVLKDAFDRKAQEFAGF 186 Query: 222 LKMGRTQLQDAVPMTLGQEFDAFHVTVKEDVARLNEISALFREVNLGATAIGTGINADPR 281 +K+GRTQLQDAVPMTLGQEF F V + ED ARL E +AL E+NLGATAIGTG+NA Sbjct: 187 IKIGRTQLQDAVPMTLGQEFRTFVVMLGEDQARLIESAALLHEINLGATAIGTGLNAPRG 246 Query: 282 YAALA 286 YA LA Sbjct: 247 YAELA 251 >BMEI0109 Non COG Length = 483 Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 142/242 (58%), Positives = 173/242 (71%), Gaps = 1/242 (0%) Query: 42 SRTEHDLLGEDDVPANALWGIHTKRAVMNFPITGVPVGHFPEFVRALALVKQAAARANKR 101 +R E D LGE D+P +A +GI T RAV NF ++ V + H P VRALA+VK+AAA AN + Sbjct: 11 TRREQDSLGERDIPMDAYFGIQTLRAVENFSLSDVALNHIPALVRALAMVKKAAATANYK 70 Query: 102 LGYLAPEKADAIEAACTQIATEKVYAESFVVDAIQGGAGTSTNMNANEVIANVALRLMGR 161 L L K AI AAC I + + E FVVD QGGAGTS+NMNANEVIAN AL +GR Sbjct: 71 LRQLPEPKYAAIVAACDNI-IDGLLMEQFVVDVFQGGAGTSSNMNANEVIANRALEHLGR 129 Query: 162 KPGDYHALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVRALDDLAYSLKGKAVEFADV 221 GDY +HPNDDVNM+QSTND YPTA+RLA++ + + AL L + + K EFA V Sbjct: 130 PRGDYQTIHPNDDVNMSQSTNDVYPTAVRLALLLSQNQVQTALHRLIAAFEAKGREFATV 189 Query: 222 LKMGRTQLQDAVPMTLGQEFDAFHVTVKEDVARLNEISALFREVNLGATAIGTGINADPR 281 +K+GRTQLQDAVP+TLGQEF+AF T++ED ARL E++ALFREVNL TAIGT INA Sbjct: 190 IKIGRTQLQDAVPITLGQEFEAFAATLREDTARLEEVAALFREVNLDGTAIGTRINASHA 249 Query: 282 YA 283 YA Sbjct: 250 YA 251 >Cj0087 [E] COG1027 Aspartate ammonia-lyase Cje Campylobacter jejuni Length = 468 Score = 270 bits (691), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 139/241 (57%), Positives = 166/241 (68%), Gaps = 1/241 (0%) Query: 42 SRTEHDLLGEDDVPANALWGIHTKRAVMNFPITGVPVGHFPEFVRALALVKQAAARANKR 101 +R EHD +GE ++ +G+ T RAV NF I+ + FP FVRALA VK+AAA AN Sbjct: 3 TRKEHDFIGELEISDEVYYGVQTFRAVENFDISHDRLKDFPRFVRALARVKKAAAMANHE 62 Query: 102 LGYLAPEKADAIEAACTQIATEKVYAESFVVDAIQGGAGTSTNMNANEVIANVALRLMGR 161 LG L DAI AC +I E Y + FVVD IQGGAGTSTNMNANEVIAN+ L LMG Sbjct: 63 LGLLDKNIQDAIIKACDKI-LEGGYYDQFVVDMIQGGAGTSTNMNANEVIANIGLELMGH 121 Query: 162 KPGDYHALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVRALDDLAYSLKGKAVEFADV 221 K G+Y LHPND VN++QSTNDAYPTAL LA+ L +A++ L + + KA EF DV Sbjct: 122 KKGEYQYLHPNDHVNLSQSTNDAYPTALHLALHDYLSDLAKAMEHLKKAYERKAEEFKDV 181 Query: 222 LKMGRTQLQDAVPMTLGQEFDAFHVTVKEDVARLNEISALFREVNLGATAIGTGINADPR 281 LKMGRTQLQDAVPMTLG+EF F V + ED+ R+ E L E+NLG TAIGTGIN+ P Sbjct: 182 LKMGRTQLQDAVPMTLGREFKTFAVMIGEDIQRVLEARKLILEINLGGTAIGTGINSHPD 241 Query: 282 Y 282 Y Sbjct: 242 Y 242 >aspA [E] COG1027 Aspartate ammonia-lyase Eco Escherichia coli K12 Length = 493 Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 132/248 (53%), Positives = 166/248 (66%) Query: 43 RTEHDLLGEDDVPANALWGIHTKRAVMNFPITGVPVGHFPEFVRALALVKQAAARANKRL 102 R E DLLG +VPA+A +G+HT RA+ NF I+ + PEFVR + +VK+AAA ANK L Sbjct: 21 RIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDIPEFVRGMVMVKKAAAMANKEL 80 Query: 103 GYLAPEKADAIEAACTQIATEKVYAESFVVDAIQGGAGTSTNMNANEVIANVALRLMGRK 162 + A+AI AAC ++ + F VD QGGAGTS NMN NEV+AN+ L LMG + Sbjct: 81 QTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGAGTSVNMNTNEVLANIGLELMGHQ 140 Query: 163 PGDYHALHPNDDVNMAQSTNDAYPTALRLAVIFATQPLVRALDDLAYSLKGKAVEFADVL 222 G+Y L+PND VN QSTNDAYPT R+AV + LV A++ L + KAVEF D+L Sbjct: 141 KGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSLIKLVDAINQLREGFERKAVEFQDIL 200 Query: 223 KMGRTQLQDAVPMTLGQEFDAFHVTVKEDVARLNEISALFREVNLGATAIGTGINADPRY 282 KMGRTQLQDAVPMTLGQEF AF + +KE+V + + L EVNLGATAIGTG+N Y Sbjct: 201 KMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRTAELLLEVNLGATAIGTGLNTPKEY 260 Query: 283 AALAXSRW 290 + LA + Sbjct: 261 SPLAVKKL 268