BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0129.0066.p (294 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc00831 [K] COG0583 Transcriptional regulator Sme Sinorhizobium... 159 8e-39 BMEII1065 [K] COG0583 Transcriptional regulator Bme Brucella mel... 152 1e-36 PA0876 [K] COG0583 Transcriptional regulator Pae Pseudomonas aer... 151 1e-36 RSc3332 [K] COG0583 Transcriptional regulator Rso Ralstonia sola... 150 4e-36 mll2784 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium ... 147 2e-35 >SMc00831 [K] COG0583 Transcriptional regulator Sme Sinorhizobium meliloti Length = 298 Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 99/287 (34%), Positives = 147/287 (51%), Gaps = 2/287 (0%) Query: 1 MDTLVNLEAFLATADAGGFSAAARKLNIATSVVAKRVTQLEERIGTALFHRSTRQLRLTE 60 M L +LE F G SAA R L + +V++KR+ +LE+R+G L R+TRQ+ LTE Sbjct: 1 MTNLGDLEIFARVVSTGSMSAAGRALGFSAAVISKRIKRLEDRLGARLLQRTTRQISLTE 60 Query: 61 AGQRYVHRARGVVADVGDLLSRMGEKQRDLSDHLRVKAPTSLTVARLADAFTIFQKQNGS 120 AGQ + R G++A + + + + + LR+ APTS +A T F K + Sbjct: 61 AGQGFYDRVLGILAGLEEAEAYASGRSSQVQGTLRISAPTSFGRMHIAPHLTGFMKDHPD 120 Query: 121 VNLEIVMIDRPVDPVTEGFDLAIGAFPHSFGGVVDEPLCRLPRLVCASPAYLKKHGIPKH 180 + L IV+ D D V EGFDLAI S +V L + RL+CA+P+Y+ +HG P Sbjct: 121 LKLHIVLTDDFTDIVAEGFDLAIRIGELSDSSLVARKLAPVRRLLCAAPSYVARHGAPTE 180 Query: 181 PRDLVDHRCLSFLPTGPEWPFEGPRGRINIQVRPILSSNEGRVLTQCAIAGNGIALLSHY 240 +L H CL W EGP G ++ + L +N ++ + IAG GIAL S + Sbjct: 181 IGELAKHICLP-AHNNDNWKLEGPDGSLSYRPEGPLVTNSSEIIREAVIAGAGIALRSTW 239 Query: 241 LVADALRDGALQPVLTDFPIP-ELWVKAAVPERRIDAAAVQALLKTL 286 + LR+G L VL + +L + A P R+ A V+ + L Sbjct: 240 DIGRELREGRLVQVLPQWEGSHKLTLSAVYPSRQFLPAKVRQFIDYL 286 >BMEII1065 [K] COG0583 Transcriptional regulator Bme Brucella melitensis Length = 325 Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 97/287 (33%), Positives = 150/287 (52%), Gaps = 2/287 (0%) Query: 1 MDTLVNLEAFLATADAGGFSAAARKLNIATSVVAKRVTQLEERIGTALFHRSTRQLRLTE 60 M +L ++E F G SAAAR L ++ +VV+KR+ +LEER+GT L R+TRQ+ LTE Sbjct: 21 MSSLADMEIFARVVATGSMSAAARDLGLSPAVVSKRLGRLEERLGTRLLQRTTRQIALTE 80 Query: 61 AGQRYVHRARGVVADVGDLLSRMGEKQRDLSDHLRVKAPTSLTVARLADAFTIFQKQNGS 120 AGQ Y R ++A++ + + + + D L++ APT+ +A F + N Sbjct: 81 AGQGYHERVLAILANIEEAEAFVARRSADARGTLKISAPTTFGRMHIAPYLVPFMRANAD 140 Query: 121 VNLEIVMIDRPVDPVTEGFDLAIGAFPHSFGGVVDEPLCRLPRLVCASPAYLKKHGIPKH 180 + + + + D VD V +G+DLAI S +V L + R+ A+P YLK+ G P+ Sbjct: 141 LTVNMQLSDEMVDIVGDGYDLAIRIGELSDSTLVARRLAPVRRIFVAAPRYLKERGTPQT 200 Query: 181 PRDLVDHRCLSFLPTGPEWPFEGPRGRINIQVRPILSSNEGRVLTQCAIAGNGIALLSHY 240 DL DH CL+ P W EGP+G I I+ L +N ++ + +AG GIA S + Sbjct: 201 IEDLQDHICLAPHNNDP-WRLEGPKGPIVIRPTGPLQTNSSEIVREAVLAGLGIAQRSTW 259 Query: 241 LVADALRDGALQPVLTDFPIP-ELWVKAAVPERRIDAAAVQALLKTL 286 V L G L VL D+ + + A P ++ A V+ + L Sbjct: 260 DVGPELAAGKLVQVLPDYAASRNVAIHAVYPSKQFLPAKVRLFIDYL 306 >PA0876 [K] COG0583 Transcriptional regulator Pae Pseudomonas aeruginosa Length = 314 Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 162/298 (54%), Gaps = 11/298 (3%) Query: 1 MDTLVNLEAFLATADAGGFSAAARKLNIATSVVAKRVTQLEERIGTALFHRSTRQLRLTE 60 MD L N+ AF++ A+ G F+AAA++L++ T+ V++ V +LE + T L HR+TR++ LTE Sbjct: 1 MDILFNMRAFVSVAETGSFTAAAQRLDLTTAYVSRAVAKLEAHLQTRLLHRTTRRIALTE 60 Query: 61 AGQRYVHRARGVVADVGDLLSRMGEKQRDLSDHLRVKAPTSLTVARLADAFTIFQKQNGS 120 AGQRY+ RA+ ++A + + + G+ S L+V A T + L A + + + Sbjct: 61 AGQRYLMRAQQILAYIEEAEAEAGDAHARPSGTLKVHAMTGIGQHYLIKAISQYCETYPE 120 Query: 121 VNLEIVMIDRPVDPVTEGFDLAIGAFPH-SFGGVVDEPLCRLPRLVCASPAYLKKHGIPK 179 V ++ + +R D + EG+D+++ P G V + + + ++CASP Y+ HG PK Sbjct: 121 VGFDLTLANRITDILDEGYDISVVIAPELPDSGFVSKCIGQTYSILCASPGYIAAHGFPK 180 Query: 180 HPRDLVDHRCLSFLPTG---PEWPFEGPRGR----INIQVRPILSSNEGRVLTQCAIAGN 232 P +L HRCL + + W F+GP G+ IN + N +T+ ++G Sbjct: 181 LPAELSAHRCLRLVNSVMSLDRWLFDGPDGQELACIN---QTHFQVNTADAMTEAVVSGM 237 Query: 233 GIALLSHYLVADALRDGALQPVLTDFPIPELWVKAAVPERRIDAAAVQALLKTLKKSL 290 GI L Y + L+DG+L VL + + L V A P R+ A ++ ++ L++ + Sbjct: 238 GIGALPVYAAVNGLKDGSLVRVLPRYSLFHLNVYALYPSRQYLDAKIRTWVEFLREHM 295 >RSc3332 [K] COG0583 Transcriptional regulator Rso Ralstonia solanacearum Length = 298 Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 95/260 (36%), Positives = 136/260 (52%), Gaps = 2/260 (0%) Query: 1 MDTLVNLEAFLATADAGGFSAAARKLNIATSVVAKRVTQLEERIGTALFHRSTRQLRLTE 60 MD L ++E F+A DAG F+ AA +L ++ +V K V +LE R+G L RSTR+ LT+ Sbjct: 1 MDKLRSMETFVAVVDAGSFTEAAMQLEMSAVMVGKYVRELETRLGARLLQRSTRRQSLTD 60 Query: 61 AGQRYVHRARGVVADVGDLLSRMGEKQRDLSDHLRVKAPTSLTVARLADAFTIFQKQNGS 120 AG+ + A+ V+ V + + + S LRV APT+ +A FQ+ + Sbjct: 61 AGRVFYEDAKRVLEQVRWAETSVERLRAQPSGTLRVSAPTTFGACVIAPLTATFQQAHPQ 120 Query: 121 VNLEIVMIDRPVDPVTEGFDLAIGAFPHSFGGVVDEPLCRLPRLVCASPAYLKKHGIPKH 180 V +E+ + +R VD EGFDLA+ +V +PLC ++ ASP YL +HG P+ Sbjct: 121 VRVELDLSNRMVDLADEGFDLAVRIGALGDADLVAKPLCAYRMVISASPDYLARHGRPET 180 Query: 181 PRDLVDHRCLSFLPTGPE--WPFEGPRGRINIQVRPILSSNEGRVLTQCAIAGNGIALLS 238 P DL HRCLS + W G G + + P S N+G L AIAG G+ L Sbjct: 181 PADLPAHRCLSHMVWNSRNAWQLSGWDGTTSWRDDPAFSCNDGHGLRMAAIAGAGLLLQP 240 Query: 239 HYLVADALRDGALQPVLTDF 258 LVA+ L G L VL + Sbjct: 241 EVLVAEDLASGRLVRVLQTY 260 >mll2784 [K] COG0583 Transcriptional regulator Mlo Mesorhizobium loti Length = 307 Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/263 (38%), Positives = 139/263 (52%), Gaps = 11/263 (4%) Query: 1 MDTLVNLEAFLATADAGGFSAAARKLNIATSVVAKRVTQLEERIGTALFHRSTRQLRLTE 60 MD L L AF TA+ G F AA R L I+ S V K V +LE+ +G L RSTR++ LTE Sbjct: 1 MDRLSGLLAFARTAELGSFIAAGRALGISASAVGKSVARLEQELGVRLLQRSTRRVGLTE 60 Query: 61 AGQRYVHRARGVVADVGDLLSRMGEKQRDLSDHLRVKAPTSLTVARLADAFTIFQKQNGS 120 G+ + R R ++ D+ D + + + LRV P +T L + F + Sbjct: 61 EGRLFNERVRRILDDIDDAEAMLSRTRETPHGRLRVSTPI-VTYHLLLPVLSEFMSRYPE 119 Query: 121 VNLEIVMIDRPVDPVTEGFDLAI--GAFPHSFGGVVDEPLCRLPRLVCASPAYLKKHGIP 178 + L+I DR VD + EG D+AI G P S +V P+ L+CA+P+YL++HG P Sbjct: 120 IELDIDFNDRIVDVIEEGIDVAIRSGELPDS--RLVSRPVGPFRMLLCAAPSYLERHGTP 177 Query: 179 KHPRDLVDHRCLS--FLPTGP--EWPFEGPRGRINIQVRPILSSNEGRVLTQCAIAGNGI 234 P DL+ H ++ FL +G EWPF G Q+R L+ N L IAG GI Sbjct: 178 GEPADLIRHFGINFRFLNSGRLLEWPF--ITGSAEPQIRSKLTCNNMEALKGATIAGLGI 235 Query: 235 ALLSHYLVADALRDGALQPVLTD 257 A + +LV +AL DG L+ VL D Sbjct: 236 ACMPDFLVREALLDGRLRTVLDD 258