BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0127.0059.p (472 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0173 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and ... 261 3e-69 mll1266 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and ... 230 5e-60 BMEII0437 [H] COG0382 4-hydroxybenzoate polyprenyltransferase an... 229 1e-59 mlr9393 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and ... 182 1e-45 ML0095 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and r... 103 6e-22 >RSc0173 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Rso Ralstonia solanacearum Length = 474 Score = 261 bits (667), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 184/483 (38%), Positives = 265/483 (54%), Gaps = 46/483 (9%) Query: 25 ARPLVVDVDEVMVRGSSVPADLVFDLIRRLRAFAVAITA---FFGPQAQSTRGADP---- 77 ++PLVVD+D ++R +D++ + FA +A F+ P RG P Sbjct: 3 SKPLVVDLDGTLIR-----SDILIE-----SGFAYLKSAPHRFYEPLLWLARGGKPVLKA 52 Query: 78 -----SGFDLSRAQFDHDAVRFLLQVLGEGRPVYLCSETHPEPFVSAVAQHLGVF-TAWA 131 + D++ +DH + +L GR + L + +H + A++ HLG+F +A Sbjct: 53 RLAQATDLDVTVLPYDHAVLEWLHTERASGRTLVLATASHVR-YAEAISAHLGLFDKTFA 111 Query: 132 AAPERQLPAARREE--LPPVLRQGFDYIGSAA----VALPASASRLARPARSEPPAPAQV 185 L A + + + +GFDY G++ V A + + P A ++ Sbjct: 112 TDGSTNLSARNKRDRLVAEYGEKGFDYAGNSHDDVIVWQAAERAYVVNPHGGVERAARKI 171 Query: 186 G------------MRSWLKLFRVHQYAKNALVLVPLLTAHKFAS-GSAATSLLAVIAFSL 232 G ++ W K R+HQ+ KN L+ VPLL H S +LLA + F L Sbjct: 172 GNVERVIDARPAPLKIWSKSLRLHQWLKNLLIFVPLLAGHLLGSPEQVLAALLAFLTFGL 231 Query: 233 CASGAYILNDLLDVEADRAHPTKRGRPIASGAIPASRAVGAMALALVAAFAIA-LSISIE 291 CAS Y+LNDLLD+E DR HP KR RP ASGA+P G + LV AF +A L + Sbjct: 232 CASSVYLLNDLLDLEDDRHHPVKRKRPFASGALPLLWGGGMFPVLLVTAFLLAWLCLPWR 291 Query: 292 FGGVLLGYFALTTSYSFWLKRIATVDVVVLATLYTVRVIGGAVAISVPMSEWLLAFSLFI 351 F VLLGY+ALT +YS +LKR +DVVVLATLYT+R+I GA A+ ++ WLLAFS+FI Sbjct: 292 FAAVLLGYYALTLAYSAFLKRRVMIDVVVLATLYTMRIIAGAAAVGAHLTFWLLAFSMFI 351 Query: 352 FMSLALVKRYIEL-ASQPDGAVLA-ARGYQVEDKSMIAILAAASGFNAVVIFTLYISSDT 409 F+SLALVKRY EL A + G V RGY+ D M++ L +A+G+ AV++ LYI Sbjct: 352 FLSLALVKRYAELHAIKARGLVKTRGRGYEASDLPMLSSLGSAAGYLAVLVLALYIQDAK 411 Query: 410 VRALYSHPQLLWVGCPILMYWIGRVMLFAQRGLIDDDPVIFALRDRVSWVALGAIGAIML 469 +LY HPQ +W+ CP+++YW+ R + RG + DDP++FA+RDRVS + G I Sbjct: 412 TASLYRHPQAIWLACPLMLYWVSRTWIITHRGQMHDDPIVFAVRDRVSLAVVALCGFIFW 471 Query: 470 AAI 472 AAI Sbjct: 472 AAI 474 >mll1266 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Mlo Mesorhizobium loti Length = 297 Score = 230 bits (587), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 133/293 (45%), Positives = 189/293 (64%), Gaps = 5/293 (1%) Query: 180 PAPAQVGMRSWLKLFRVHQYAKNALVLVPLLTAHK-FASGSAATSLLAVIAFSLCASGAY 238 PAP +R+ +K+ R HQ+ KN+L+ VP++ +H+ F + LLA ++FS AS Y Sbjct: 2 PAPKPT-LRTVVKMLRAHQWLKNSLIAVPMVLSHEYFNTNMIWQCLLAFVSFSAVASAIY 60 Query: 239 ILNDLLDVEADRAHPTKRGRPIASGAIPASRAVGAMALALVAAFAIALSISIEFGGVLLG 298 ILND D+ DR H TKR RP ASGA+ +GA+A+ L L +S+EF VL G Sbjct: 61 ILNDFFDLALDRKHVTKRNRPFASGALSIPFGLGAIAVLLAIGIGTGLFLSLEFLAVLGG 120 Query: 299 YFALTTSYSFWLKRIATVDVVVLATLYTVRVIGGAVAISVPMSEWLLAFSLFIFMSLALV 358 Y +TT+YS KR+ VDV+ LA LY++RVI GA A V +S WLLAFS+F F+SLALV Sbjct: 121 YMVVTTAYSLSFKRMLLVDVLTLAGLYSIRVIAGAAATGVAVSFWLLAFSIFFFLSLALV 180 Query: 359 KRYIELASQ--PDGAVLAARGYQVEDKSMIAILAAASGFNAVVIFTLYISSDTVRALYSH 416 KR++EL + P G +A RGY+ ED+ ++A AS F++ ++ LY+ S VR LY H Sbjct: 181 KRFVELRTTAIPPGERIAGRGYRTEDQEIVAQAGMASAFSSALVLALYMDSVAVRELYPH 240 Query: 417 PQLLWVGCPILMYWIGRVMLFAQRGLIDDDPVIFALRDRVSWVALGAIGAIML 469 P L+W PI++Y RV + A+R ++DDPV+F +RD S + + AIGA++L Sbjct: 241 PWLIWPLPPIVLYLTMRVWILARRDEMNDDPVVFIIRDWRSQIVV-AIGAVLL 292 >BMEII0437 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Bme Brucella melitensis Length = 479 Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 167/473 (35%), Positives = 250/473 (52%), Gaps = 41/473 (8%) Query: 27 PLVVDVDEVMVRGSSVPADL----VFDLIRR--LRAFAVAITAFFGPQAQSTRGADPSGF 80 PL VD+D G+ V DL +F L+++ AF + + G A Sbjct: 12 PLAVDLD-----GTLVSTDLLWESIFILLKKNIFFAFLLPVWLLSGKAHLKHEIARRVTI 66 Query: 81 DLSRAQFDHDAVRFLLQVLGEGRPVYLCSETHPEPFVSAVAQHLGVFTA-WAAAPERQLP 139 + S + D + +L GR + L + + E + AVA LG+F+A A+ L Sbjct: 67 NASVLPYRQDFLDYLRAEHASGRKLVLATAS-AETYAQAVASELGIFSAVHASTCTTNLS 125 Query: 140 AARREEL--PPVLRQGFDYIGSAA--------------VALPASASRLARPARSEPPAPA 183 A R+ + +GFDY G+ VA +A+R + Sbjct: 126 AHRKADALSEHYGARGFDYAGNDCDDIAVFNAARQAIVVAPDPAAARFQKSNGGRLFERN 185 Query: 184 QVGMRSWLKLFRVHQYAKNALVLVPLLTAHKFASGSA-ATSLLAVIAFSLCASGAYILND 242 + +++LK+ RVHQ+ KN +V VP AH + + LA IAFS AS YILND Sbjct: 186 PIAWKTYLKMLRVHQWLKNLVVFVPAFLAHDILEPQVLSATFLAFIAFSASASAIYILND 245 Query: 243 LLDVEADRAHPTKRGRPIASG--AIPASRAV--GAMALALVAAFAIALSISIEFGGVLLG 298 ++D+ DR H KR RP ASG +IP AV G + +A++ F + L ++ G Sbjct: 246 IIDLPLDRHHVRKRFRPFASGQLSIPFGLAVSAGLLLVAVLICFFLPLPFALAIGI---- 301 Query: 299 YFALTTSYSFWLKRIATVDVVVLATLYTVRVIGGAVAISVPMSEWLLAFSLFIFMSLALV 358 Y TT+YS +KR+ VDV+ LA LY++R++GG A +P+S WL+AF++F F+SLALV Sbjct: 302 YLITTTAYSLVIKRMLLVDVICLAALYSLRLLGGMAAARIPLSFWLMAFAMFFFLSLALV 361 Query: 359 KRYIELASQ--PDGAVLAARGYQVEDKSMIAILAAASGFNAVVIFTLYISSDTVRALYSH 416 KRY+EL + + +A RGY+ ED ++ AS F AV++ LYI+S+ VR LY++ Sbjct: 362 KRYVELQNSTVTEKDRIAGRGYRPEDIDIVGQSGVASAFTAVLVLALYINSEAVRTLYTY 421 Query: 417 PQLLWVGCPILMYWIGRVMLFAQRGLIDDDPVIFALRDRVSWVALGAIGAIML 469 P L+W PI++Y RV + A RG +DDDPV+F D S V + A+GA++L Sbjct: 422 PWLIWPLVPIVLYINVRVWILAHRGEMDDDPVMFIAFDWRSQVMI-ALGAVLL 473 >mlr9393 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Mlo Mesorhizobium loti Length = 541 Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 147/461 (31%), Positives = 217/461 (47%), Gaps = 37/461 (8%) Query: 27 PLVVDVDEVMVRGSSVPADLVFDLIRR----LRAFAVAITAFFGPQAQSTRGADPSGFDL 82 PLV D+D ++R + LR F + F G A A+ + Sbjct: 73 PLVCDLDGTLIRSDTFHESFFEAFFHSPQHLLRTFP---SWFKGRAALKETLANVCSIEP 129 Query: 83 SRAQFDHDAVRFLLQVLGEGRPVYLCSETHPEPFVSAVAQHLGVFTAWAAAPERQLPAAR 142 + + + + +GR +YL + + ++ HLG F A A + L Sbjct: 130 RALPYRAEMLELMRGAKADGREIYLVTAA-DQSIADSIICHLGGF-AGAKGSDGSLNLKS 187 Query: 143 REELPPV---LRQGFDYIGSAAVALP---------------ASASRLARPARSEPPA--P 182 R +L + +GF Y G +A LP AS+L R A E A P Sbjct: 188 RNKLKWLQASFPEGFIYAGDSAADLPIWEAASGAVLVGNGVKYASQL-RKAGVEVRAISP 246 Query: 183 AQVG-MRSWLKLFRVHQYAKNALVLVPLLTAHKFASGSAAT-SLLAVIAFSLCASGAYIL 240 ++ WL RVHQ++KN L+ VPL H A +++A +AF L AS YI+ Sbjct: 247 ENTNPVKDWLFELRVHQWSKNVLIFVPLFLGHIAGDLHAVLRTIVAFVAFGLIASATYII 306 Query: 241 NDLLDVEADRAHPTKRGRPIASGAIPASRAVGAMALALVAAFAIALSISIEFGGVLLGYF 300 NDL D+EADRAH TKR R IA+G I A L A +AL + +F + Y Sbjct: 307 NDLADLEADRAHATKRFRAIAAGRISVINGFLASIFMLGAGIGVALLLHPQFALAVAAYL 366 Query: 301 ALTTSYSFWLKRIATVDVVVLATLYTVRVIGGAVAISVPMSEWLLAFSLFIFMSLALVKR 360 LT +YSF LKR A +DV V+ L+T+R++ G V + S WLL+FS F SL+L KR Sbjct: 367 VLTLAYSFRLKRYALLDVTVIGALFTLRIVMGQVLNDLAFSPWLLSFSAMFFFSLSLAKR 426 Query: 361 YIEL--ASQPDGAVLAARGYQVEDKSMIAILAAASGFNAVVIFTLYISSDTVRAL--YSH 416 ++E A + RGY +D + AS ++VI L+I+ + RA Y + Sbjct: 427 HVEAMRACSKGRDAIKGRGYLPDDWPLTLGYGLASASASIVIMLLFIALEA-RATQEYHN 485 Query: 417 PQLLWVGCPILMYWIGRVMLFAQRGLIDDDPVIFALRDRVS 457 P L+V + W+ R+ L + R + DDP++FAL+D+ S Sbjct: 486 PAWLYVAPAGVFMWLQRIWLLSHRMGLHDDPIVFALKDKTS 526 >ML0095 [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases Mle Mycobacterium leprae Length = 302 Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 7/180 (3%) Query: 191 LKLFRVHQYAKNALVLVPLLTA------HKFASGSAATSLLAVIAFSLCASGAYILNDLL 244 +K R Q+ KN LVL L +++A SL A + FSL AS Y++ND+ Sbjct: 18 VKAIRPRQWVKNVLVLAAPLAGLGGGMHYRYAELLTEVSL-AFVVFSLAASSVYLINDVR 76 Query: 245 DVEADRAHPTKRGRPIASGAIPASRAVGAMALALVAAFAIALSISIEFGGVLLGYFALTT 304 D+EAD+ HPTKR RPIA+G + A + VA+ +A ++ V++ Y + Sbjct: 77 DIEADQEHPTKRFRPIAAGVVTEWLAYTLAVVLGVASLVVAWLMTPNLALVMVIYIGMQL 136 Query: 305 SYSFWLKRIATVDVVVLATLYTVRVIGGAVAISVPMSEWLLAFSLFIFMSLALVKRYIEL 364 Y F LK A VD+ ++++ Y +R I G VA ++P+S+W L + F + + KRY EL Sbjct: 137 GYCFGLKHQAVVDICIVSSAYLIRAIAGGVATNIPLSQWFLLTAAFGSLFMVAGKRYAEL 196