BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0127.0020.p         (83 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll9611 Non COG                                                       118   3e-27
RSc2582 [NU] COG5268 Type IV secretory pathway, TrbD component R...   109   1e-24

>mll9611 Non COG
          Length = 216

 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 56/82 (68%), Positives = 70/82 (85%)

Query: 1   VAGFVVPVHRALTEPILMGGAPRSVAIVNGTLAAALGLGLRLWIAGLVLWFIGHMAAVWA 60
           V G+ VPVHRALTE I++GGAPR +AI+NGTLA A+GLGLRLW+ GL++W +GH  AVWA
Sbjct: 134 VPGWTVPVHRALTEQIMLGGAPRGIAILNGTLAGAVGLGLRLWLIGLLIWAVGHATAVWA 193

Query: 61  AKRDPAFVDVVRRHLRIPGHLN 82
           A+RDP F +V RRHLR+PGHL+
Sbjct: 194 ARRDPLFFEVGRRHLRLPGHLS 215


>RSc2582 [NU] COG5268 Type IV secretory pathway, TrbD component Rso
          Ralstonia solanacearum
          Length = 90

 Score =  109 bits (273), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 52/75 (69%), Positives = 63/75 (84%)

Query: 2  AGFVVPVHRALTEPILMGGAPRSVAIVNGTLAAALGLGLRLWIAGLVLWFIGHMAAVWAA 61
          AGF VP+HR+LTEPILMGGAPR+VAI NGTLAAA+GLGL+LWI G+VLW +GH  AVW A
Sbjct: 9  AGFEVPLHRSLTEPILMGGAPRTVAIANGTLAAAVGLGLQLWIPGVVLWIVGHSMAVWGA 68

Query: 62 KRDPAFVDVVRRHLR 76
          + DP F+ V  RH++
Sbjct: 69 RVDPQFMQVFARHIK 83