BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0126.0003.p         (288 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll6593_2 [R] COG0645 Predicted kinase Mlo Mesorhizobium loti         114   3e-25
CC0920_2 Non COG                                                      104   3e-22
aq_1484 [R] COG0645 Predicted kinase Aae Aquifex aeolicus              78   3e-14
alr4787_2 [R] COG0645 Predicted kinase Nos Nostoc sp. PCC 7120         71   3e-12
slr0207_2 [R] COG0645 Predicted kinase Syn Synechocystis               67   6e-11

>mll6593_2 [R] COG0645 Predicted kinase Mlo Mesorhizobium loti
          Length = 183

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 95/171 (55%), Gaps = 3/171 (1%)

Query: 105 LVAVGGKSGTGKSVLARDMARLIAPPPGALVLRSDVIRKQLYHVAEHATLPPETYTPEAS 164
           LVA+GG SG+GK+ +A  +A  +  PPGA ++ SD IRK ++ V     LP   Y P+ S
Sbjct: 1   LVAIGGLSGSGKTTIAEALAAHVGAPPGARIVESDRIRKAMHGVPAETRLPDNAYRPDVS 60

Query: 165 DRVYQAMLDRAKRAMAQGISVVLDAAFLKQAERDAARAAARNAKVKFSGLFLTADQAIRL 224
           DRVY  M  RA   +++G SVV DA F + A+R+    AAR+  + F G +L AD  +  
Sbjct: 61  DRVYNEMTWRAGLILSEGGSVVADAVFDRPADRERIEKAARDRGIPFFGFWLEADPLVLW 120

Query: 225 RRVASRQHDASDATAGVVLSQESIDTGHIDWQLIDASGSP---AATLQRSM 272
           +RV+ R+   SDAT  ++  Q     G   W+  D+   P   AA L+R  
Sbjct: 121 QRVSERKGGPSDATVDILSRQLQRKAGQASWRRTDSDRKPVDIAAELRRCW 171


>CC0920_2 Non COG
          Length = 159

 Score =  104 bits (259), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 81/141 (57%), Gaps = 4/141 (2%)

Query: 123 MARLIAP----PPGALVLRSDVIRKQLYHVAEHATLPPETYTPEASDRVYQAMLDRAKRA 178
            +R+ AP     PGA+VLR+D IRK+L+ V     LP E YTPE S RVY  +   A+  
Sbjct: 2   FSRVCAPGLGSAPGAVVLRTDEIRKRLWGVPSLQRLPREAYTPEMSARVYDQLFQDAELC 61

Query: 179 MAQGISVVLDAAFLKQAERDAARAAARNAKVKFSGLFLTADQAIRLRRVASRQHDASDAT 238
           +  G SVVLDA FLK  ER  A   A+   V F G++L A   +   RVA+R  DASDA 
Sbjct: 62  LKAGRSVVLDAVFLKPEERARAEVLAKTCDVAFLGVWLEAPPEVLRARVAARVDDASDAD 121

Query: 239 AGVVLSQESIDTGHIDWQLID 259
             V+ +Q + D G I W+ +D
Sbjct: 122 VAVLENQLTRDAGEITWRKVD 142


>aq_1484 [R] COG0645 Predicted kinase Aae Aquifex aeolicus
          Length = 176

 Score = 77.8 bits (190), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 94/185 (50%), Gaps = 30/185 (16%)

Query: 105 LVAVGGKSGTGKSVLARDMARLIAPPPGALVLRSDVIRKQLYHVAEHATLPPE------- 157
           LV + G SG+GKS LA     ++    G   LRSDVIRKQL      A L PE       
Sbjct: 4   LVVIFGLSGSGKSFLAS----ILHEKCGYEWLRSDVIRKQL------AGLKPEESAKADY 53

Query: 158 ---TYTPEASDRVYQAMLDRAKRAMAQGISVVLDAAFLKQAERDAARAAARNAKVKFSGL 214
               YT E + +VY+ M+ RAK  + +G  VVLDA F+K+ +R+      +N K  F  L
Sbjct: 54  GKGIYTKEITKKVYEEMVKRAKELIDRGKKVVLDATFIKRWQRE---LVLKNFKDPFFIL 110

Query: 215 FLTADQAIRLRRVASRQHDASDATAGVVLSQ-ESIDT-GHIDWQLIDASGSP---AATLQ 269
               ++ I+  R+ SR+ D SDA   + L Q E  +    ID+ +I+ + S     + L+
Sbjct: 111 AFAPEEVIK-ERLKSRK-DVSDADWNIYLKQKEEFEAPEEIDYCVINTNKSKEELESRLK 168

Query: 270 RSMPC 274
           + + C
Sbjct: 169 KLLGC 173


>alr4787_2 [R] COG0645 Predicted kinase Nos Nostoc sp. PCC 7120
          Length = 172

 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 4/146 (2%)

Query: 100 PEPPRLVAVGGKSGTGKSVLARDMARLIAPPPGALVLRSDVIRKQLYHVAEHATLPPETY 159
           P+  +L+ + G SG+GKS  A+ +AR +    GA+ +RSD +RK L  ++       + Y
Sbjct: 1   PKQGKLILMSGLSGSGKSTTAKYLARQL----GAIQIRSDAVRKHLGGISLWERGGDDLY 56

Query: 160 TPEASDRVYQAMLDRAKRAMAQGISVVLDAAFLKQAERDAARAAARNAKVKFSGLFLTAD 219
           TPE + + Y  +L+       QG +V+LDA + KQ  R  A A A    +    +  TA 
Sbjct: 57  TPEMTQKTYARLLNLGIILANQGYTVILDAKYDKQNLRAEAIAQAEKHHLPLQIIHCTAP 116

Query: 220 QAIRLRRVASRQHDASDATAGVVLSQ 245
             +   R+  R  D +DAT  ++ SQ
Sbjct: 117 IEVIQERLIKRTGDIADATVDLLSSQ 142


>slr0207_2 [R] COG0645 Predicted kinase Syn Synechocystis
          Length = 181

 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 10/161 (6%)

Query: 104 RLVAVGGKSGTGKSVLARDMARLIAPPPGALVLRSDVIRKQLYHVAEHATLPPETYTPEA 163
            +V + G SG+GKS +A+ +A+L+     A+ +RSD +RK L  V  +       Y+   
Sbjct: 3   EIVLMAGLSGSGKSTVAKQIAQLLP----AIHIRSDAVRKHLGGVPLNKRGKANLYSQAM 58

Query: 164 SDRVYQAMLDRAKRAMAQGISVVLDAAFLKQAERDAARAAARNAKVKFSGLFLTADQAIR 223
           +++VY ++ D A  A+  G +V+LDA F ++  R      A   ++  + +   A   + 
Sbjct: 59  TEKVYHSLQDLASLAVKSGFNVILDAKFDREQWRSPMVELALREQLSVTIIHCDAPIEVL 118

Query: 224 LRRVASRQHDASDATAGVVLSQESIDTGHIDWQLIDASGSP 264
            +R+ SR+ D SDA   ++L Q       +DW+    S  P
Sbjct: 119 TKRLQSRRGDVSDANETLLLLQT------LDWEDFTESEDP 153