BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0124.0044.p         (86 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb21472 [S] COG5478 Predicted small integral membrane protein S...   109   2e-24
mll1528 Non COG                                                       107   7e-24
AGpA399 [S] COG5478 Predicted small integral membrane protein At...   100   7e-22
AGl2041 [S] COG5478 Predicted small integral membrane protein At...   100   2e-21
PA2187 [S] COG5478 Predicted small integral membrane protein Pae...    99   2e-21

>SMb21472 [S] COG5478 Predicted small integral membrane protein Sme
           Sinorhizobium meliloti
          Length = 179

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/76 (68%), Positives = 62/76 (81%), Gaps = 1/76 (1%)

Query: 1   VWAITGPLFGFSDTWQLVINTGTTIVTFLMVFLIQSTQNRDTLALQLKLDELILATKAAS 60
           VW +TGP+FGFS TWQLV+NTGTTIVTFLMVF++Q+TQNRD  ALQ KLDELIL T AA 
Sbjct: 72  VWGLTGPIFGFSQTWQLVVNTGTTIVTFLMVFVLQNTQNRDGRALQAKLDELIL-TSAAE 130

Query: 61  NRIAGIEEASDEEIKQ 76
           N   GIE   ++E+K+
Sbjct: 131 NSYVGIERLDEKELKR 146


>mll1528 Non COG
          Length = 141

 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 53/85 (62%), Positives = 67/85 (78%), Gaps = 2/85 (2%)

Query: 1   VWAITGPLFGFSDTWQLVINTGTTIVTFLMVFLIQSTQNRDTLALQLKLDELILATKAAS 60
           VWA +GP FGFSDTWQLVINTGTTI+TFLMVFLIQ+TQNRD  A+Q KLDELI  ++  +
Sbjct: 31  VWATSGPFFGFSDTWQLVINTGTTIITFLMVFLIQNTQNRDGAAIQAKLDELIRVSEGHN 90

Query: 61  NRIAGIEEASDEEIKQAKVEMLERA 85
           N I GIE  ++ E+++ + +  ERA
Sbjct: 91  NFI-GIEHLTESEVEEIR-DKCERA 113


>AGpA399 [S] COG5478 Predicted small integral membrane protein Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 143

 Score =  100 bits (249), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 45/85 (52%), Positives = 62/85 (72%)

Query: 2   WAITGPLFGFSDTWQLVINTGTTIVTFLMVFLIQSTQNRDTLALQLKLDELILATKAASN 61
           W I+GP FGFS+ WQLVINTGTTIVTFLM+FL+Q++QNRD+ A++ KLDEL+ A + A  
Sbjct: 40  WGISGPFFGFSEVWQLVINTGTTIVTFLMIFLVQNSQNRDSAAMEAKLDELLRAVEQARA 99

Query: 62  RIAGIEEASDEEIKQAKVEMLERAG 86
              GIE  + +EI+  +  + +  G
Sbjct: 100 DFIGIEHLTAQEIEDIRARLEKENG 124


>AGl2041 [S] COG5478 Predicted small integral membrane protein Atu
          Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 135

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 56/68 (82%)

Query: 1  VWAITGPLFGFSDTWQLVINTGTTIVTFLMVFLIQSTQNRDTLALQLKLDELILATKAAS 60
          VW I+GPLFGFS+ WQLVINTGTTIVTFLM+FL+Q++QNRD+ A++ KLDEL+ A + A 
Sbjct: 31 VWGISGPLFGFSEVWQLVINTGTTIVTFLMIFLVQNSQNRDSAAMEAKLDELLRAVEEAR 90

Query: 61 NRIAGIEE 68
          +   GIE 
Sbjct: 91 SDFIGIEH 98


>PA2187 [S] COG5478 Predicted small integral membrane protein Pae
          Pseudomonas aeruginosa
          Length = 141

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/61 (73%), Positives = 54/61 (88%)

Query: 1  VWAITGPLFGFSDTWQLVINTGTTIVTFLMVFLIQSTQNRDTLALQLKLDELILATKAAS 60
          +WAI+GPLF F+DTWQLVINT TTIVTFLMVFLIQ+TQNRDT AL +K+DEL+ +T+ A 
Sbjct: 29 LWAISGPLFDFNDTWQLVINTSTTIVTFLMVFLIQNTQNRDTDALHIKIDELLRSTRRAH 88

Query: 61 N 61
          N
Sbjct: 89 N 89