BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0120.0131.p         (208 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC0382 Non COG                                                        240   1e-63
STM3642 [L] COG2818 3-methyladenine DNA glycosylase Sty Salmonel...   217   1e-56
RSp0666 [L] COG2818 3-methyladenine DNA glycosylase Rso Ralstoni...   216   3e-56
YPO4074 [L] COG2818 3-methyladenine DNA glycosylase Ype Yersinia...   214   1e-55
Ztag [L] COG2818 3-methyladenine DNA glycosylase EcZ Escherichia...   214   1e-55

>CC0382 Non COG
          Length = 195

 Score =  240 bits (613), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 113/186 (60%), Positives = 140/186 (75%), Gaps = 3/186 (1%)

Query: 13  TRCPWPGE--DAFYVAYHDNEWGVPEYDDRALYEKLILDGFQAGLSWITILRKRENFRKA 70
            RC W G   D FY AYHD EWGVPE+D RAL+EKL+LDGFQAGLSWITILRKRE FR A
Sbjct: 5   ARCTWKGMNGDPFYEAYHDTEWGVPEWDSRALWEKLVLDGFQAGLSWITILRKREAFRAA 64

Query: 71  FDDFQPEKIARYNDKKVHALMNDAGIVRNRAKIEGAVASAKGYLEIMEKGPGFSKFLWDF 130
           F +F PEK+AR+++     LM DAGI+R+  KI+  +A A+ YL++ E+G  F +FLWD 
Sbjct: 65  FANFDPEKVARFDETDRARLMADAGIIRSNGKIDATIAGARLYLDMRERGEDFGQFLWDM 124

Query: 131 VDGKPKVNQFKTTASVPASTPVSIKVSKELGARGFKFVGPTIVYAFMQATGMVNDHLVTC 190
           V G P  NQ++    VPA TP+++++SK L A+GFKF GP IVYAFMQATG+VNDHLV+C
Sbjct: 125 VGGAPIQNQWE-AGQVPAQTPLAVEMSKALKAKGFKFCGPVIVYAFMQATGLVNDHLVSC 183

Query: 191 FCHEAC 196
           F HE C
Sbjct: 184 FRHEDC 189


>STM3642 [L] COG2818 3-methyladenine DNA glycosylase Sty Salmonella
           typhimurium LT2
          Length = 193

 Score =  217 bits (553), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 91/180 (50%), Positives = 126/180 (70%)

Query: 14  RCPWPGEDAFYVAYHDNEWGVPEYDDRALYEKLILDGFQAGLSWITILRKRENFRKAFDD 73
           RC W  +D  Y+AYHDNEWGVPE D R L+E + L+G QAGLSWIT+L+KREN+R  F  
Sbjct: 3   RCDWVSQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRACFHQ 62

Query: 74  FQPEKIARYNDKKVHALMNDAGIVRNRAKIEGAVASAKGYLEIMEKGPGFSKFLWDFVDG 133
           F P +IA   ++ V  L+ + GI+R+R KI+  +++A+ +L + + G  F+ F+W FVDG
Sbjct: 63  FDPVRIAAMQEEDVEHLLQNTGIIRHRGKIQAIISNARAWLAMEQNGESFADFVWSFVDG 122

Query: 134 KPKVNQFKTTASVPASTPVSIKVSKELGARGFKFVGPTIVYAFMQATGMVNDHLVTCFCH 193
           +P++ Q  +   +P STP S  ++K L  RGFKFVG TI Y+FMQA G+VNDH+  CFCH
Sbjct: 123 QPQITQAASLDEIPTSTPASDALAKALKKRGFKFVGTTICYSFMQACGLVNDHITGCFCH 182


>RSp0666 [L] COG2818 3-methyladenine DNA glycosylase Rso Ralstonia
           solanacearum
          Length = 190

 Score =  216 bits (550), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 99/179 (55%), Positives = 124/179 (69%)

Query: 13  TRCPWPGEDAFYVAYHDNEWGVPEYDDRALYEKLILDGFQAGLSWITILRKRENFRKAFD 72
           +RC W GED   +AYHD EWG P +DDR LYE L+L+G QAGLSW TILRKR  +++ FD
Sbjct: 2   SRCCWVGEDPLMIAYHDTEWGTPSHDDRHLYEMLVLEGAQAGLSWQTILRKRARYQEVFD 61

Query: 73  DFQPEKIARYNDKKVHALMNDAGIVRNRAKIEGAVASAKGYLEIMEKGPGFSKFLWDFVD 132
            F P ++AR+   ++  L+ D GIVRNRAK+E AV +A+  LE+ +       FLW FV 
Sbjct: 62  GFDPARVARFTPARIETLLADPGIVRNRAKVEAAVVNARKVLEVQDAVGSLDGFLWAFVG 121

Query: 133 GKPKVNQFKTTASVPASTPVSIKVSKELGARGFKFVGPTIVYAFMQATGMVNDHLVTCF 191
           G+P VN++ +    PAST  S  +SK L ARGFKFVGPTI YAFMQATGMV+DH   CF
Sbjct: 122 GRPVVNRWSSYRDAPASTEASKAMSKALAARGFKFVGPTICYAFMQATGMVDDHEAGCF 180


>YPO4074 [L] COG2818 3-methyladenine DNA glycosylase Ype Yersinia pestis
          Length = 190

 Score =  214 bits (545), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 94/180 (52%), Positives = 127/180 (70%)

Query: 14  RCPWPGEDAFYVAYHDNEWGVPEYDDRALYEKLILDGFQAGLSWITILRKRENFRKAFDD 73
           RC W   D  Y+AYHD EWGVP  D RAL+E + L+G QAGLSWIT+L+KRE++RK+F  
Sbjct: 5   RCGWVTSDPLYLAYHDTEWGVPLKDSRALFEMICLEGQQAGLSWITVLKKREHYRKSFHH 64

Query: 74  FQPEKIARYNDKKVHALMNDAGIVRNRAKIEGAVASAKGYLEIMEKGPGFSKFLWDFVDG 133
           F P K+A+   ++V   + D+GI+R+R KI+  + +A+ YL +   G  FS+F+W FVD 
Sbjct: 65  FDPVKVAKMGPEEVEIRVQDSGIIRHRGKIQAIITNAQAYLAMEANGEDFSRFIWSFVDD 124

Query: 134 KPKVNQFKTTASVPASTPVSIKVSKELGARGFKFVGPTIVYAFMQATGMVNDHLVTCFCH 193
           +PK+N +   A  PA+T VS  +SK L  RGFKF+G TI YAFMQA+G+VNDH+  CFCH
Sbjct: 125 EPKINHWWCLAEAPATTAVSDAMSKALKKRGFKFIGSTICYAFMQASGLVNDHMANCFCH 184


>Ztag [L] COG2818 3-methyladenine DNA glycosylase EcZ Escherichia coli
           O157:H7 EDL933
          Length = 187

 Score =  214 bits (545), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 93/180 (51%), Positives = 127/180 (70%)

Query: 14  RCPWPGEDAFYVAYHDNEWGVPEYDDRALYEKLILDGFQAGLSWITILRKRENFRKAFDD 73
           RC W  +D  Y+AYHDNEWGVPE D + L+E + L+G QAGLSWIT+L+KREN+R  F  
Sbjct: 3   RCGWVSQDPLYIAYHDNEWGVPETDRKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQ 62

Query: 74  FQPEKIARYNDKKVHALMNDAGIVRNRAKIEGAVASAKGYLEIMEKGPGFSKFLWDFVDG 133
           F P K+A   ++ V  L+ DAGI+R+R KI+  + +A+ YL++ + G  F+ F+W FV+ 
Sbjct: 63  FDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFADFVWSFVNH 122

Query: 134 KPKVNQFKTTASVPASTPVSIKVSKELGARGFKFVGPTIVYAFMQATGMVNDHLVTCFCH 193
           +P+V Q  T + +P STP S  +SK L  RGFKFVG TI Y+FMQA G+VNDH+V C C+
Sbjct: 123 QPQVTQATTLSEIPTSTPASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGCCCY 182