BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0122.p (319 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VC0927 [M] COG1922 Teichoic acid biosynthesis proteins Vch Vibri... 205 1e-52 CAC2317 [M] COG1922 Teichoic acid biosynthesis proteins Cac Clos... 142 8e-34 slr1118 [M] COG1922 Teichoic acid biosynthesis proteins Syn Syne... 142 1e-33 TM0818 [M] COG1922 Teichoic acid biosynthesis proteins Tma Therm... 128 2e-29 AGc4311 [M] COG1922 Teichoic acid biosynthesis proteins Atu Agro... 124 3e-28 >VC0927 [M] COG1922 Teichoic acid biosynthesis proteins Vch Vibrio cholerae Length = 250 Score = 205 bits (522), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 105/238 (44%), Positives = 149/238 (62%), Gaps = 4/238 (1%) Query: 1 LGVEFDAVTLDQAAQRCVD-ICRRSNNSHVVMTINASHLCMMRRDVELAHACSAADMTVA 59 LG D ++ + D I R+ HVV +N + L MR+D ELA + + D+ Sbjct: 12 LGSPMDVASMSETVALIRDRILRQEFTQHVV--VNVAKLVNMRKDPELAQSVTECDIINI 69 Query: 60 DGMPVVWAIRASGQHMPERVAGIDLMEGLLRAAASNGLCVYFLGAHQDVVEKLVRVCEAR 119 DGM VVW R G +PERVAG+DL L AA + V++LGA Q++VEK V +A+ Sbjct: 70 DGMGVVWGARFLGHQVPERVAGVDLFLELNAMAAQEQMPVFYLGAKQEIVEKTAAVMQAK 129 Query: 120 FPQLKIAGFRNGYFGPDEHDVIVDEIRASGAHILFIGLPSPFKEVWSERYRDRLQVPVIL 179 PQL IAG+ +GYF DE IV++IR SGA +LF+ + SP KE + R++++L V ++ Sbjct: 130 HPQLVIAGYHHGYFWDDEQ-AIVEKIRQSGAKLLFVAITSPKKENFINRWQEQLGVLFVM 188 Query: 180 GVGGSFDVLAGFIKRAPRLFQSLGLEWFWRLMMEPRKLWRRYLSTNSEFIWLALREVV 237 GVGG+FDV+AG + RAP Q GLEW +R++ EP ++W+RYL TNS + WL L E + Sbjct: 189 GVGGTFDVVAGHVSRAPLWMQKAGLEWLYRVLQEPGRMWKRYLITNSRYAWLLLNEKI 246 >CAC2317 [M] COG1922 Teichoic acid biosynthesis proteins Cac Clostridium acetobutylicum Length = 250 Score = 142 bits (359), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 76/224 (33%), Positives = 121/224 (54%), Gaps = 5/224 (2%) Query: 1 LGVEFDAVTLDQAAQRCVDICRRSNNSHVVMTINASHLCMMRRDVELAHACSAADMTVAD 60 L D V + +A + +D + H V+T N H+ + +D E AD+ + D Sbjct: 9 LNTNVDNVNMKEAIE-IIDGFIKDGKYHYVVTPNVDHIVRLEKDEEFKKVYENADLILTD 67 Query: 61 GMPVVWAIRASGQHMPERVAGIDLMEGLLRAAASNGLCVYFLGAHQDVVEKLVRVCEARF 120 GMP+VW + + E+V+G DL + + AA V+ LGA + V K +A++ Sbjct: 68 GMPLVWISKWLKTPVKEKVSGSDLFPRVCKLAAEKEYTVFILGAAEGVAHKAGENLKAKY 127 Query: 121 PQLKIAGFRNGYFG----PDEHDVIVDEIRASGAHILFIGLPSPFKEVWSERYRDRLQVP 176 LK+AG + FG P+E I++ I IL +G+ +P +E + +YRD L+VP Sbjct: 128 KGLKVAGTYSPSFGFEKKPEEIKYIIEMINDIKPDILAVGVSAPKQEKFVAQYRDELKVP 187 Query: 177 VILGVGGSFDVLAGFIKRAPRLFQSLGLEWFWRLMMEPRKLWRR 220 V L +G S D+ AG +KRAP Q GLEWF+R+ +P+K+++R Sbjct: 188 VALAIGASIDIEAGTLKRAPLWMQKSGLEWFYRMFRQPKKIFKR 231 >slr1118 [M] COG1922 Teichoic acid biosynthesis proteins Syn Synechocystis Length = 251 Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/228 (33%), Positives = 123/228 (53%), Gaps = 5/228 (2%) Query: 5 FDAVTLDQAAQRCVDICRRSNNSHVVMTINASHLCMMRRDVELAHACSAADMTVADGMPV 64 D QA +++ + + S+VV N + + + A + DGMP+ Sbjct: 12 IDCTDYGQATATIINLAKAAIASYVVAA-NVHVVMSAYGNKSYQEIINQAVLVTPDGMPL 70 Query: 65 VWAIRASGQHMPERVAGIDLMEGLLRAAASNGLCVYFLGAHQDVVEKLVRVCEARFPQLK 124 VW ++ G RV G DLM + + AA+ L +Y G +D +++L RFP+LK Sbjct: 71 VWGLKLLGYPQATRVYGPDLMLTICQRAAAENLGIYLYGGTEDCLQQLKVNLIKRFPKLK 130 Query: 125 IAGFRNGYF---GPDEHDVIVDEIRASGAHILFIGLPSPFKEVWSERYRDRLQVPVILGV 181 I G + F P+E + +I+ SGA ILF+GL P +E+W + ++ + V++GV Sbjct: 131 IVGADSPPFRPLEPEEEKNALAKIKQSGAGILFVGLGCPKQEIWMANHYQKIDL-VMVGV 189 Query: 182 GGSFDVLAGFIKRAPRLFQSLGLEWFWRLMMEPRKLWRRYLSTNSEFI 229 G +F+ +G + +APR ++GLEW +RL MEP++LWRRYL N FI Sbjct: 190 GAAFNFHSGLVSQAPRWLMAMGLEWLYRLRMEPKRLWRRYLINNPAFI 237 >TM0818 [M] COG1922 Teichoic acid biosynthesis proteins Tma Thermotoga maritima Length = 274 Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/217 (34%), Positives = 116/217 (53%), Gaps = 5/217 (2%) Query: 25 NNSHVVMTINASHLCMMRRDVELAHACSAADMTVADGMPVVWAIRASGQHMPERVAGIDL 84 N V+T+NAS L D ++AD+ V DG VVWA++ ER+ G+++ Sbjct: 61 NIKTFVVTMNASILLKAIEDAGYRAIVNSADLVVPDGFGVVWAMKTLTGETTERLPGVEI 120 Query: 85 MEGLLRAAASNGLCVYFLGAHQDVVEKLVRVCEARFPQLKIAGFRNGYFGPDEHDVIVDE 144 M+ L + G VY LG +++VEK +V E +++ G +G+F E IV++ Sbjct: 121 MKHLCERSKEKGWKVYLLGTKREIVEKAKQVLER--SGVRVVGCHDGFFSEKESPKIVED 178 Query: 145 IRASGAHILFIGLPSPFKEVWSERYRDRLQVPVILGVGGSFDVLAGFIKRAPRLFQSLGL 204 + S +LF+G+ P +E W R +L V + +GVGGS DV++G KRAP Q + L Sbjct: 179 VNRSSTDLLFVGMGVPRQEEWIYRNFPQLNVKLAMGVGGSIDVVSGKKKRAPEWVQRMNL 238 Query: 205 EWFWRLMMEPRKLWRRYLSTN-SEFIWLALREVVARR 240 EW +R P L +R + S+F++ LRE + R Sbjct: 239 EWLYRFFQSP--LSKRKVPVQVSKFVFFVLREKLKNR 273 >AGc4311 [M] COG1922 Teichoic acid biosynthesis proteins Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 297 Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 109/205 (53%), Gaps = 2/205 (0%) Query: 32 TINASHLCMMRRDVELAHACSAADMTVADGMP-VVWAIRASGQHMPERVAGIDLMEGLLR 90 + N + + D E AD ADGM V+++ + Q + ERVA DL+ + + Sbjct: 83 SANGQVIALCHHDREFDAMLRQADQIHADGMSLVIFSRKFCRQALRERVATTDLVHAVAK 142 Query: 91 AAASNGLCVYFLGAHQDVVEKLVRVCEARFPQLKIAGFRNGYFGPDEHDVIVDEIRASGA 150 A G YFLG ++V V + +P+L +G RNGYF E D ++ +I S Sbjct: 143 RAEETGSRFYFLGGSEEVNRAAVEEMQRLYPRLVFSGRRNGYFSRAEEDAVLADITTSKT 202 Query: 151 HILFIGLPSPFKEVWSERYRDRLQ-VPVILGVGGSFDVLAGFIKRAPRLFQSLGLEWFWR 209 IL++G P ++ + R DRL + VI GG FD LAG RAP+ Q +GLEW +R Sbjct: 203 DILWVGFGIPLEQRFVSRNLDRLSGIAVIKTCGGLFDFLAGRNSRAPQWMQDMGLEWLYR 262 Query: 210 LMMEPRKLWRRYLSTNSEFIWLALR 234 M+EP++L +RYL TN I+ L+ Sbjct: 263 AMLEPKRLGKRYLLTNPIAIYSLLK 287