BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0109.p (310 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0832 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases B... 419 e-117 AGl161 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Atu ... 412 e-115 SMb21060 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Sm... 376 e-104 alr2827 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Nos... 300 3e-81 Cj1427c [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Cje... 100 7e-21 >BMEII0832 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Bme Brucella melitensis Length = 355 Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust. Identities = 205/300 (68%), Positives = 237/300 (79%) Query: 1 VDVPAIRKDTRDVELSDLKGFDAVLHFAALSNDPLGNLRPGLTDQINHVASVRLAQLAKQ 60 ++VP IRKD RDV DL+GFDAV+H AALSNDPLGNL LT INH ASV +A+ AK Sbjct: 49 MNVPTIRKDVRDVSPRDLEGFDAVIHLAALSNDPLGNLNEDLTYAINHHASVAMAKAAKL 108 Query: 61 AGVRRFVFASSCSNYGKAGDGMIDETGALNPVTAYGESKVQSERDIASLSGDGFCPVYLR 120 AGV RF+FASSCSNYG + +IDETG L PVTAYG SKV++E++I L+ FCPVYLR Sbjct: 109 AGVGRFLFASSCSNYGISDAELIDETGELKPVTAYGRSKVRAEQEIRKLADASFCPVYLR 168 Query: 121 PATAYGVSPRLRFDVVLNNLVAWAVTTRKILLKSDGTPWRPIVHIEDISRAFIAAMEAPE 180 PATAYGVSP LRFD+VLNNLVAWAVT I LKSDGTPWRPIVHI DISRAF+AAMEAP Sbjct: 169 PATAYGVSPFLRFDIVLNNLVAWAVTKGLIYLKSDGTPWRPIVHIHDISRAFMAAMEAPR 228 Query: 181 AAVFNEAFNVGQTAHNYQIRDLAKIVADVVPGCQIEFADGAGPDTRSYRVSFEKIRTRLP 240 V+NEAFNVG TAHNY+IRD+A VAD VP C+IE+A AGPDTRSYRVSFEK+ LP Sbjct: 229 EKVWNEAFNVGSTAHNYRIRDIAGGVADNVPDCRIEYAQDAGPDTRSYRVSFEKLAHVLP 288 Query: 241 EFKPQWDAKMGAEQLYQAYRASGITLEEFEGPRYQRISHVNKLLADGALDADLRHVESRQ 300 E KPQWDA G +L AY S +T+EEFEGPR+QRI+H+ KL+A G LDADLR +++ Sbjct: 289 EAKPQWDAVAGTRELLAAYSRSTLTVEEFEGPRFQRIAHIRKLIAQGVLDADLRRMDAHS 348 >AGl161 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 378 Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust. Identities = 192/292 (65%), Positives = 236/292 (80%) Query: 3 VPAIRKDTRDVELSDLKGFDAVLHFAALSNDPLGNLRPGLTDQINHVASVRLAQLAKQAG 62 VP + KD RD+ +D++GFDAV+H AALSNDPL NL P +T +IN+ SVR AQ AKQAG Sbjct: 71 VPGVCKDIRDITPADMEGFDAVIHLAALSNDPLSNLNPEITYEINYRGSVRAAQAAKQAG 130 Query: 63 VRRFVFASSCSNYGKAGDGMIDETGALNPVTAYGESKVQSERDIASLSGDGFCPVYLRPA 122 V+RF+FASSCSNYG AG+G+++ET L PV+AYG SKV +ER+IASL+ GF PVY+RPA Sbjct: 131 VKRFIFASSCSNYGAAGEGLVNETAELKPVSAYGTSKVLAEREIASLASPGFSPVYMRPA 190 Query: 123 TAYGVSPRLRFDVVLNNLVAWAVTTRKILLKSDGTPWRPIVHIEDISRAFIAAMEAPEAA 182 TAYG+SP LRFD+VLNNL AWAVT ILLKSDG+PWRPIVHIEDISRAF+AA+EAP A Sbjct: 191 TAYGLSPMLRFDIVLNNLTAWAVTEGLILLKSDGSPWRPIVHIEDISRAFLAALEAPTDA 250 Query: 183 VFNEAFNVGQTAHNYQIRDLAKIVADVVPGCQIEFADGAGPDTRSYRVSFEKIRTRLPEF 242 + N+AFNVGQ AHNYQIR++A+IVA VPGC++++A A PDTRSYRV F KI LP F Sbjct: 251 IHNQAFNVGQDAHNYQIREIAEIVALTVPGCRLQYASDASPDTRSYRVDFGKIARALPAF 310 Query: 243 KPQWDAKMGAEQLYQAYRASGITLEEFEGPRYQRISHVNKLLADGALDADLR 294 KP W A GAEQLY+AY+++G+T+ EFEGP YQRI + KL+ D +D +LR Sbjct: 311 KPTWTAAAGAEQLYRAYKSAGLTMAEFEGPHYQRIGQLQKLIGDKDIDLNLR 362 >SMb21060 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Sme Sinorhizobium meliloti Length = 349 Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust. Identities = 178/295 (60%), Positives = 223/295 (75%) Query: 2 DVPAIRKDTRDVELSDLKGFDAVLHFAALSNDPLGNLRPGLTDQINHVASVRLAQLAKQA 61 D P + +D RD+ + DL GFDAV+H A LSNDPLG+ RP LT QIN ASV LA+LAK+A Sbjct: 46 DTPTMEEDVRDIVIDDLAGFDAVIHLAGLSNDPLGDYRPNLTQQINCEASVTLARLAKRA 105 Query: 62 GVRRFVFASSCSNYGKAGDGMIDETGALNPVTAYGESKVQSERDIASLSGDGFCPVYLRP 121 GV RF+FASSCSNYG AG G + E+ A NPVT YG SKV+ E +A ++ + F P +LR Sbjct: 106 GVPRFLFASSCSNYGAAGSGFLTESAAFNPVTPYGISKVEVEHAVAPMADECFSPTFLRA 165 Query: 122 ATAYGVSPRLRFDVVLNNLVAWAVTTRKILLKSDGTPWRPIVHIEDISRAFIAAMEAPEA 181 +TAYG+SPR+RFD+VLNNL AWA TT +I LKSDG+PWRPIVH+EDI+RA+IAA+EA Sbjct: 166 STAYGLSPRIRFDLVLNNLTAWAFTTGQIYLKSDGSPWRPIVHVEDIARAYIAALEADRE 225 Query: 182 AVFNEAFNVGQTAHNYQIRDLAKIVADVVPGCQIEFADGAGPDTRSYRVSFEKIRTRLPE 241 V N+AFNVG T NYQ+R++A IV +VP +IEFA AGPDTR YRV I RL Sbjct: 226 LVHNQAFNVGLTTENYQVREIADIVQAIVPNSRIEFAADAGPDTRCYRVDCNYIGRRLHA 285 Query: 242 FKPQWDAKMGAEQLYQAYRASGITLEEFEGPRYQRISHVNKLLADGALDADLRHV 296 FKPQW A+ G EQLY+A+ + G++LE+FEG R++RI+HV KL+ +G LD DLR V Sbjct: 286 FKPQWTARRGVEQLYEAFCSVGLSLEDFEGERFKRIAHVKKLIRNGELDEDLRRV 340 >alr2827 [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Nos Nostoc sp. PCC 7120 Length = 342 Score = 300 bits (768), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 143/293 (48%), Positives = 191/293 (65%), Gaps = 1/293 (0%) Query: 1 VDVPAIRKDTRDVELSDLKGFDAVLHFAALSNDPLGNLRPGLTDQINHVASVRLAQLAKQ 60 V + KD R + DL+G +A++H A LSNDP G L P +T INH+ SVRLA LAK Sbjct: 46 VTAKTLNKDIRHITPEDLEGVEAIVHMAELSNDPTGQLSPNITYDINHIGSVRLANLAKT 105 Query: 61 AGVRRFVFASSCSNYGKAGDGMIDETGALNPVTAYGESKVQSERDIASLSGDGFCPVYLR 120 GVRRFV+ SSCS YG A +G + E +NP TAY E K ERD+ L+ D F P ++R Sbjct: 106 MGVRRFVYMSSCSVYGVATEGDVTEASPVNPQTAYAECKTLVERDVTLLADDDFSPTFMR 165 Query: 121 PATAYGVSPRLRFDVVLNNLVAWAVTTRKILLKSDGTPWRPIVHIEDISRAFIAAMEAPE 180 ATA+G SPR+RFD+VLNNL A TT++I + SDGTPWRP+VH DI +A + A+EAP Sbjct: 166 NATAFGASPRMRFDIVLNNLAGLAWTTKEIKMISDGTPWRPLVHALDICKAIVCALEAPR 225 Query: 181 AAVFNEAFNVGQTAHNYQIRDLAKIVADVVPGCQIEFADGAGPDTRSYRVSFEKIRTRLP 240 V N+ FNVG T +NY+++++A+I+AD PGC++ F D G D RSYRVSFEKI + LP Sbjct: 226 DIVHNQVFNVGDTTNNYRVKEIAQIIADTFPGCKLSFGDN-GADNRSYRVSFEKINSILP 284 Query: 241 EFKPQWDAKMGAEQLYQAYRASGITLEEFEGPRYQRISHVNKLLADGALDADL 293 FK WDA+ GA QL+ + +T + F + R+ + L+ +D D Sbjct: 285 GFKCDWDAQKGARQLFDLFSQIDMTEDTFLFRGFTRLKQLEYLIRTEQIDQDF 337 >Cj1427c [MG] COG0451 Nucleoside-diphosphate-sugar epimerases Cje Campylobacter jejuni Length = 313 Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 12/246 (4%) Query: 22 DAVLHFAALSNDPLGNLRPGLTDQINHVASVRLAQLAKQAGVRRFVFASSCSNYGKA-GD 80 D ++ AAL PL P L IN+ A ++ A + + F++ ++ S YG D Sbjct: 72 DIIIPLAALVGAPLCKRNPKLAKMINYEAVKMISDFASPSQI--FIYPNTNSGYGIGEKD 129 Query: 81 GMIDETGALNPVTAYGESKVQSERDIASLSGDGFCPVYLRPATAYGVSPRLRFDVVLNNL 140 M E L P++ YG KV +E+ L G C V R AT +G+SPR+R D+++N+ Sbjct: 130 AMCTEESPLRPISEYGIDKVHAEQ---YLLDKGNC-VTFRLATVFGISPRMRLDLLVNDF 185 Query: 141 VAWAVTTRKILLKSDGTPWRPIVHIEDISRAFIAAMEAPEAAVFNEAFNVGQTAHNYQIR 200 A + I+L + R +H+ D+ + FI +E + + +A+N+G ++ N R Sbjct: 186 TYRAYRDKFIVLFEEHF-RRNYIHVRDVVKGFIHGIENYD-KMKGQAYNMGLSSANLTKR 243 Query: 201 DLAKIVADVVPGCQIEFAD-GAGPDTRSYRVSFEKIRTRLPEFKPQWDAKMGAEQLYQAY 259 LA+ + +P I A+ G PD R Y VS K+ +KP + G ++L +A+ Sbjct: 244 QLAETIKKYIPDFYIHSANIGEDPDKRDYLVSNTKLEA--TGWKPDNTLEDGIKELLRAF 301 Query: 260 RASGIT 265 + + Sbjct: 302 KMMKVN 307