BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0091.p (309 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BS_opuBB [E] COG1174 ABC-type proline/glycine betaine transport ... 131 2e-30 SPy1134_1 [E] COG1174 ABC-type proline/glycine betaine transport... 130 3e-30 lin1466 [E] COG1174 ABC-type proline/glycine betaine transport s... 127 5e-29 SA0678_1 [E] COG1174 ABC-type proline/glycine betaine transport ... 126 6e-29 BS_opuCB [E] COG1174 ABC-type proline/glycine betaine transport ... 123 4e-28 >BS_opuBB [E] COG1174 ABC-type proline/glycine betaine transport systems, permease component Bsu Bacillus subtilis Length = 217 Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 123/215 (57%), Gaps = 18/215 (8%) Query: 7 LLPTYLTPHIVLCATALALGLLVSLPLAALAADRPWLRRLVLAIASLIQTIPGLALLALF 66 L TY HI + A+ LG+LV++PL + ++ I ++IQT+P LA+LA F Sbjct: 16 LYKTY--EHITISLIAVILGVLVAVPLGVVLTRMKKGAGTIIGIVNIIQTLPSLAILAFF 73 Query: 67 YPLLLALSTLTARLFGFGIPALGFLPTLIALTLYAMLPILRNSVVGLNGINPAVVEAAEG 126 PLL +G +P ++AL Y++LPILRN+ G+ G+N ++E+ +G Sbjct: 74 IPLL----------------GVGKVPAIVALFFYSVLPILRNTYTGIRGVNKNLLESGKG 117 Query: 127 VGMTPQQILTRVKAPLATPVIMAGVRTAAVWTIGAATLSTPVGQTSLGNYIFTGLQTENW 186 +GMTP + + V+ PLA PVIMAG+RT+ ++ IG ATL++ +G LG+YIF GL Sbjct: 118 IGMTPAEQVRLVELPLAAPVIMAGIRTSTIYLIGWATLASFIGGGGLGDYIFIGLNLYQP 177 Query: 187 ISVLFGCIAAAGLALITDFCLGLVETGASERNRKR 221 ++ G + LA++ D+ L + E + +R Sbjct: 178 EYIIGGAVPVTILAIVIDYVLAVAERKLTPAGMQR 212 >SPy1134_1 [E] COG1174 ABC-type proline/glycine betaine transport systems, permease component Spy Streptococcus pyogenes M1 GAS Length = 204 Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 121/210 (57%), Gaps = 19/210 (9%) Query: 2 FDAWRLLPTYLTPHIVLCATALALGLLVSLPLAALAADRPWLRRLVLAIASLIQTIPGLA 61 F+ W L H+ + +L + LL+ +PLAAL + ++L + + QTIP LA Sbjct: 14 FNEWL---AALGEHLQISLLSLMIALLIGVPLAALLSRSKRWSDIMLQVTGVFQTIPSLA 70 Query: 62 LLALFYPLLLALSTLTARLFGFGIPALGFLPTLIALTLYAMLPILRNSVVGLNGINPAVV 121 LL LF PL+ +G LP + AL +YA+ PIL+N++ GLNGI+P++V Sbjct: 71 LLGLFIPLM----------------GIGTLPAVTALVIYAIFPILQNTITGLNGIDPSLV 114 Query: 122 EAAEGVGMTPQQILTRVKAPLATPVIMAGVRTAAVWTIGAATLSTPVGQTSLGNYIFTGL 181 EA GMT + L + P+A PVIM+GVRT+AV IG ATL++ +G LG++I G+ Sbjct: 115 EAGIAFGMTKWERLKTFEIPIAMPVIMSGVRTSAVMIIGTATLASLIGAGGLGSFILLGI 174 Query: 182 QTENWISVLFGCIAAAGLALITDFCLGLVE 211 N +L G I++A LA+I + L +E Sbjct: 175 DRNNANLILIGAISSALLAIIFNSLLQYLE 204 >lin1466 [E] COG1174 ABC-type proline/glycine betaine transport systems, permease component Lin Listeria innocua Length = 218 Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 16/197 (8%) Query: 15 HIVLCATALALGLLVSLPLAALAADRPWLRRLVLAIASLIQTIPGLALLALFYPLLLALS 74 H+ + +A+ LG+ V++P+ L P + V+ + S++QT+P LA+LA P L Sbjct: 22 HLFISLSAVILGIAVAVPVGILLTRSPKVANFVIGVVSVLQTVPSLAILAFIIPFL---- 77 Query: 75 TLTARLFGFGIPALGFLPTLIALTLYAMLPILRNSVVGLNGINPAVVEAAEGVGMTPQQI 134 +G LP +IAL +YA+LPILRN+ +G+ G++ ++E+ G+GMT Q+ Sbjct: 78 ------------GVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQL 125 Query: 135 LTRVKAPLATPVIMAGVRTAAVWTIGAATLSTPVGQTSLGNYIFTGLQTENWISVLFGCI 194 + V+ P + VIMAG+R +AV+ I ATL++ +G LG++IF GL +L G I Sbjct: 126 IINVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAGGLGDFIFNGLNLYRPDLILGGAI 185 Query: 195 AAAGLALITDFCLGLVE 211 LAL+ +F LG +E Sbjct: 186 PVTILALVVEFALGKLE 202 >SA0678_1 [E] COG1174 ABC-type proline/glycine betaine transport systems, permease component Sau Staphylococcus aureus N315 Length = 234 Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 118/196 (60%), Gaps = 16/196 (8%) Query: 12 LTPHIVLCATALALGLLVSLPLAALAADRPWLRRLVLAIASLIQTIPGLALLALFYPLLL 71 + HI + AL + +++PL L + +V+ IA+++QTIP LALL L PL Sbjct: 19 MIEHIQISFIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPL-- 76 Query: 72 ALSTLTARLFGFGIPALGFLPTLIALTLYAMLPILRNSVVGLNGINPAVVEAAEGVGMTP 131 FGI G +P +IAL +YA+LPILRN+ G+ ++P+++EAA+G+GM P Sbjct: 77 -----------FGI---GRVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKP 122 Query: 132 QQILTRVKAPLATPVIMAGVRTAAVWTIGAATLSTPVGQTSLGNYIFTGLQTENWISVLF 191 + LT+V+ P+A PVIMAGVRTA V IG ATL+ +G LG+ I G+ N +L Sbjct: 123 FRRLTKVELPIAMPVIMAGVRTAMVLIIGTATLAALIGAGGLGDLILLGIDRNNASLILL 182 Query: 192 GCIAAAGLALITDFCL 207 G I AA LA+I D L Sbjct: 183 GAIPAALLAIIFDLIL 198 >BS_opuCB [E] COG1174 ABC-type proline/glycine betaine transport systems, permease component Bsu Bacillus subtilis Length = 217 Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 116/203 (57%), Gaps = 16/203 (7%) Query: 15 HIVLCATALALGLLVSLPLAALAADRPWLRRLVLAIASLIQTIPGLALLALFYPLLLALS 74 H+ + A+ LG++V++PL V+ +++QT+P LA+LA F PLL Sbjct: 22 HLYISLIAVVLGIIVAVPLGVALTRMKKGAGAVIGFVNIVQTLPSLAILAFFIPLL---- 77 Query: 75 TLTARLFGFGIPALGFLPTLIALTLYAMLPILRNSVVGLNGINPAVVEAAEGVGMTPQQI 134 +G +P ++AL Y++LPILRN+ G+ G+N ++E+ +G+GMT + Sbjct: 78 ------------GVGKVPAIVALFFYSVLPILRNTYTGIKGVNKNLLESGKGIGMTGWEQ 125 Query: 135 LTRVKAPLATPVIMAGVRTAAVWTIGAATLSTPVGQTSLGNYIFTGLQTENWISVLFGCI 194 + V+ PLA P+IMAG+RT+ ++ IG ATL++ +G LG+YIF GL ++ G + Sbjct: 126 IRLVEIPLAIPIIMAGIRTSTIYLIGWATLASFIGGGGLGDYIFIGLNLYQPEYIIGGAV 185 Query: 195 AAAGLALITDFCLGLVETGASER 217 LA+I D+ L + E + + Sbjct: 186 PVTILAIIIDYVLAVTERKVTPK 208