BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0064.p (464 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MTH965 [R] COG2079 Uncharacterized protein involved in propionat... 108 4e-23 PA0881 [R] COG2079 Uncharacterized protein involved in propionat... 87 9e-17 SMb21098 [R] COG2079 Uncharacterized protein involved in propion... 64 6e-10 PAE1717 [R] COG2079 Uncharacterized protein involved in propiona... 64 6e-10 AGl2924 [R] COG2079 Uncharacterized protein involved in propiona... 60 8e-09 >MTH965 [R] COG2079 Uncharacterized protein involved in propionate catabolism Mth Methanothermobacter thermautotrophicus Length = 452 Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 118/244 (48%), Gaps = 6/244 (2%) Query: 8 TAALGTFVATTSASELSPDVATKAAICLLDSLGLALAARHEPTAAAARAMAAEVLPGPRT 67 T L FV++ S S++ PD A +C LD LG+AL E + A + G Sbjct: 21 TRRLAEFVSSLSYSDIPPDATEMARLCFLDFLGVALRGSSEMSGLMALGAMGK---GSGG 77 Query: 68 ARIWASGKHAALSEAVLANGIAVHAHFQDDTDHDSWTHPGSLIAPVAVALGEALDAPLRT 127 A I G+ A L NGI H DD + HPGS + P A+A EA A R Sbjct: 78 ATIIGHGR-GDTERAALLNGIFAHNLDLDDGHRGAQMHPGSCVIPAALAAAEATGATFRD 136 Query: 128 VLTALTVGYSALKWLGAGEVVARGLIGRGVRTSPTFGTIGAAAAAAAALGLDPPRSTSAV 187 +TA+ GY A ++G + G G T+ T GT GAAAAA+ + D +A+ Sbjct: 137 FITAMVAGYEAAIFMGI--LANPGHRELGFHTTGTCGTFGAAAAASRIICSDVDAVVNAL 194 Query: 188 AIAACTTGGTLEPVRCGSDEWRVQNGRAAQGGLVAAELAARGVQGAPDALEGPKGLLRSL 247 IA G LE G+ + GRAAQ GL++A LA++G GA +EG +G LR++ Sbjct: 195 GIAGTQAAGLLESDHAGTMAKHLHAGRAAQSGLISARLASQGFTGAESVIEGDEGFLRAM 254 Query: 248 AGLD 251 D Sbjct: 255 CRSD 258 >PA0881 [R] COG2079 Uncharacterized protein involved in propionate catabolism Pae Pseudomonas aeruginosa Length = 450 Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 87/306 (28%), Positives = 136/306 (44%), Gaps = 10/306 (3%) Query: 8 TAALGTFVATTSASELSPDVATKAAICLLDSLGLALAARHEPTAAAARAMAAEVLPGPRT 67 T L F+A +L P V + LD LG ALA + + A + P + Sbjct: 5 TQQLAGFLAGLRYQDLPPAVLARMEELFLDWLGSALAGKGQHPIPLFERYAERMGPADGS 64 Query: 68 ARIWASGKHAALSEAVLANGIAVHAHFQDDTDHDSWTHPGSLIAPVAVALGEALDAPLRT 127 A+I S + ++ A L NG A H QDD + S HP +++ P A+A + L Sbjct: 65 AQILPSRRRSSPYFAALVNGAASHVVEQDDLHNSSVLHPAAVVFPAALAAAQDLGRSGAE 124 Query: 128 VLTALTVGYSALKWLGAGEVVARGLIGRGVRTSPTFGTIGAAAAAAAALGLDPPRSTSAV 187 ++ A GY A + GE + R R T+ T GT+ AA A + D R + Sbjct: 125 LILAAVAGYEA--GIRIGEFLGRSHY-RVFHTTATVGTLAAAVAVGKLMDFDRERFVDLL 181 Query: 188 AIAACTTGGTLEPVRCGSDEWRVQNGRAAQGGLVAAELAARGVQGAPDALEGPKGLLRSL 247 A G E +R +D ++ +AA GL+AA L A G+ GA LEG +G+ + Sbjct: 182 GSAGTQAAGLWEFLRDAADSKQLHTAKAAADGLLAAYLTADGLSGARHILEGEQGMAAGM 241 Query: 248 AGLDHTPEQW-QRGPDVATMIGIMAKPFATLGDNM---SAVLAAHMLHRDGIDLSQVKRI 303 + D PE+ R ++ K A+ A+LA ++ R+G+D SQ+ + Sbjct: 242 SS-DADPERLVDRLGSRWALLETSFKFHASCRHTHPAADALLA--LMQREGLDHSQIAAV 298 Query: 304 TVTIWE 309 T + + Sbjct: 299 TARVHQ 304 >SMb21098 [R] COG2079 Uncharacterized protein involved in propionate catabolism Sme Sinorhizobium meliloti Length = 265 Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 8/226 (3%) Query: 11 LGTFVATTSASELSPDVATKAAICLLDSLGLALAARHEPTAAAARAMAAEVLPGPRTARI 70 L +F++ L DV K + + D++G ALA +A +A P +A I Sbjct: 13 LASFLSALRFEALPADVVEKTKVHIADTIGSALAG----ARSAEARIARRAAGAPGSALI 68 Query: 71 WASGKHAALSEAVLANGIAVHAHFQDDTDHDSWTHPGSLIAPVAVALGEALDAPL--RTV 128 W +G AA EA L NG+A HA DD+ H G+++ P +A P+ R + Sbjct: 69 WGTGDRAAAREAALINGVAAHAFELDDSG--GCDHSGAVVIPAVLAAIAEAKQPVTGREL 126 Query: 129 LTALTVGYSALKWLGAGEVVARGLIGRGVRTSPTFGTIGAAAAAAAALGLDPPRSTSAVA 188 + ++ GY + + G G ++ T GT+ AAAA A G D + A+ Sbjct: 127 IASVAAGYETGRRVLEAAGGYDSHNGLGWHSTGTCGTLAAAAAVARLNGFDDLATRDAIT 186 Query: 189 IAACTTGGTLEPVRCGSDEWRVQNGRAAQGGLVAAELAARGVQGAP 234 +A + G + GS ++ GRAA+GGL+AA A + P Sbjct: 187 LATSFSSGLWAFIHDGSQAKKIHAGRAAEGGLLAARFAGEALPAPP 232 >PAE1717 [R] COG2079 Uncharacterized protein involved in propionate catabolism Pya Pyrobaculum aerophilum Length = 453 Score = 64.3 bits (155), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 98/389 (25%), Positives = 161/389 (41%), Gaps = 50/389 (12%) Query: 8 TAALGTFVATTSASELSPDVATKAAICLLDSLGLALAARH-EPTAAAARAMAAEVLPGPR 66 T L + + S++ +V + ++DS+ +A AA EP + RA A + Sbjct: 5 TKILAEYTESVDYSKVPLEVRHEVKRRIIDSIAVAFAAYSAEPVVLSRRA--ASKFAVRK 62 Query: 67 TARIWASGKHAALSEAVLANGIAVHAHFQDDTD-HDSWTHPGSLIAPVAVALGEALDAPL 125 ARI + A A NG+ + H +DT HP LI A+A+G+ ++A Sbjct: 63 GARILGTRYEVAPDWATFVNGLMIRYHDYNDTYLSKEPLHPSDLIG-AALAVGDYVEARG 121 Query: 126 RTVLTALTVGYSA-LKWLGAGEVVARGLIGRGVRTSPTFGTIGAAAAAAAALGLDPPRST 184 ++TA+ +GY A + + G + RG F IG+ A+A LGLD ++ Sbjct: 122 TDLITAVAIGYEASVTFCDGGTLRKRGW------DHVNFLGIGSVLASAKLLGLDAVKTQ 175 Query: 185 SAVAIAACTTGGTLEPVRCGS-DEWR-VQNGRAAQGGLVAAELAARGVQGAPDALEGPKG 242 A++I A + R G W+ +++ + AA LA G G EG G Sbjct: 176 HALSIYAVPHAA-MRQTRVGELSMWKGAAAANSSRNAVFAALLAQEGFTGPYKPFEGEMG 234 Query: 243 LLRSLAGLDHTPEQWQRGPDVATMIGIMA------------KPFATLGDNMSAVLAAHML 290 R L D DV+ + GI A KP+ +AV AA L Sbjct: 235 FFRQLLQGDF---------DVSVLSGIEAKNPPRRILDTYIKPYPVEYHAQTAVEAALRL 285 Query: 291 HRDGIDLSQVKRITVTIWEPYTQYPGTSFKGPFTRTVQTQA----STAFAVAAMLRYGRL 346 R+ + + ++++I + +E Y K P T+ S + AA +G Sbjct: 286 -REKVRIEEIEKIRIDTYE--AAYTIIGPKDPEKWDPHTKETADHSLMWITAAAFVWG-- 340 Query: 347 DYEMGVEHRQDRE---IMTLVEKTIVEPD 372 + +EH +D ++TL++K V D Sbjct: 341 --PIKIEHYKDIRNPAVLTLMKKIEVNLD 367 >AGl2924 [R] COG2079 Uncharacterized protein involved in propionate catabolism Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 448 Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 78/179 (43%), Gaps = 4/179 (2%) Query: 82 AVLANGIAVHAHFQDDTDHDSWTHPGSLIAPVAVALGEALDAPLRTVLTALTVGYSALKW 141 A L NG A H DD HP I P +A+ ++ + A VG + Sbjct: 79 AALINGHAGHVLDYDDVHGSVRGHPTVAIIPALLAVAVEENSTADAFIAAYIVGLETMAR 138 Query: 142 LGAGEVVARGLIGRGVRTSPTFGTIGAAAAAAAALGLDPPRSTSAVAIAACTTGGTLEPV 201 +G + G + T G IGAAAA A L DP + +A+ +AA + G + Sbjct: 139 IGLS--LGTKHYENGFHATATLGPIGAAAAIAHLLKFDPQTTATALGLAATQSAGLR--L 194 Query: 202 RCGSDEWRVQNGRAAQGGLVAAELAARGVQGAPDALEGPKGLLRSLAGLDHTPEQWQRG 260 + G D + G A + GL AA LA G QGAPD LE P G + A P++ G Sbjct: 195 QFGFDAKPLHAGLATRAGLTAARLARSGFQGAPDFLENPIGFYSAFAFGAEQPKRVLSG 253