BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0120.0038.p (455 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Rv2424c [L] COG3547 Transposase and inactivated derivatives Mtu ... 134 5e-31 MT2497 [L] COG3547 Transposase and inactivated derivatives MtC M... 130 4e-30 Rv2177c [L] COG3547 Transposase and inactivated derivatives Mtu ... 75 3e-13 MT2233 [L] COG3547 Transposase and inactivated derivatives MtC M... 75 3e-13 SSO1556 [L] COG3547 Transposase and inactivated derivatives Sso ... 64 5e-10 >Rv2424c [L] COG3547 Transposase and inactivated derivatives Mtu Mycobacterium tuberculosis H37Rv Length = 333 Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 165/365 (45%), Gaps = 48/365 (13%) Query: 93 VNARYAKNVPGRKTDVSDAAWLRQLHSYGLLRGSFRPDAEIATLRAYLRQRERLVEYAAA 152 + R + PGRKTD+ DA WL L GLLRG P A+I R +R R +LVE+ + Sbjct: 1 MQCRAREERPGRKTDLLDAEWLVHLLECGLLRGWLIPPADIKAARDVIRYRRKLVEHRTS 60 Query: 153 HIQHMQKALMEMNLQLHHVVSDITGATGMRIIRAIVAGERNPDVLATYRDVRCHSSIETI 212 +Q + L + ++ V S +T + ++ A++ GER P VLA S I + Sbjct: 61 KLQRLGNVLQDAGIKADSVASSVTPKSVRAMVEALIDGERRPAVLADLARGSMRSKIPDL 120 Query: 213 RAALVGNDRDEHVFALTQSLELYDTYQAKMLDCDRKLESLITALTDKGAKPVGKLPRPRV 272 + AL G D H L D +L+++I AL ++ Sbjct: 121 QRALEGRFDDHHALMCRLHLAHLD-----------QLDAMIGALDEQ------------- 156 Query: 273 KTKQVNTPSFDVRAALYGVLGVDLTEIHGLGPSLALKLIGECGTDLRAW-PTAKHFTSWL 331 +Q+ P F R L + I G+G + +I E G D AW P+A+H SW+ Sbjct: 157 -IEQLMHP-FCARREL-------IASIPGIGVGASATVISEIGADPAAWFPSAEHLASWV 207 Query: 332 CLAPGNKISGGKVLSSRTRRSSSRAAALLRLAATTIGRSDTALGAFYRR-------LSSR 384 L PGN S GK R + +L A R+D L +YRR S Sbjct: 208 RLCPGNHESAGKRHHGARRTGNQHLQPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSP 267 Query: 385 AGKAKAVTATARKIAVLFYNTLRHGISYKDPGADHY-----EEQYRSRVLANLKRRAKSL 439 A KA+T A K+ V+ ++ L G ++D GAD++ ++ R R++A L+ A+ L Sbjct: 268 AANKKAITTVAHKLIVIIWHVLATGRPHQDLGADYFTTRMDPDKERRRLVAKLE--AQGL 325 Query: 440 GFVLQ 444 G L+ Sbjct: 326 GVTLE 330 >MT2497 [L] COG3547 Transposase and inactivated derivatives MtC Mycobacterium tuberculosis CDC1551 Length = 333 Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 163/365 (44%), Gaps = 48/365 (13%) Query: 93 VNARYAKNVPGRKTDVSDAAWLRQLHSYGLLRGSFRPDAEIATLRAYLRQRERLVEYAAA 152 + R + PGRKTD+ DA WL L GLLRG P A+I R +R R +LVE+ + Sbjct: 1 MQCRAREERPGRKTDLLDAEWLVHLLECGLLRGWLIPPADIKAARDVIRYRRKLVEHRTS 60 Query: 153 HIQHMQKALMEMNLQLHHVVSDITGATGMRIIRAIVAGERNPDVLATYRDVRCHSSIETI 212 +Q + L + ++ V S +T + ++ A++ GER P VLA S I + Sbjct: 61 KLQRLGNVLQDAGIKADSVASSVTPKSVRAMVEALIDGERRPAVLADLARGSMRSKIPDL 120 Query: 213 RAALVGNDRDEHVFALTQSLELYDTYQAKMLDCDRKLESLITALTDKGAKPVGKLPRPRV 272 + AL G D H L D +L+++I AL ++ Sbjct: 121 QRALEGRFDDHHALMCRLHLAHLD-----------QLDAMIGALDEQ------------- 156 Query: 273 KTKQVNTPSFDVRAALYGVLGVDLTEIHGLGPSLALKLIGECGTDLRAW-PTAKHFTSWL 331 +Q+ P F R L + I G+G + +I E G D AW P+A+H SW+ Sbjct: 157 -IEQLMHP-FCARREL-------IASIPGIGVGASATVISEIGADPAAWFPSAEHLASWV 207 Query: 332 CLAPGNKISGGKVLSSRTRRSSSRAAALLRLAATTIGRSDTALGAFYRR-------LSSR 384 L PGN S GK R + +L A R+D L +YRR S Sbjct: 208 RLCPGNHESAGKRHHGARRTGNQHLQPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSP 267 Query: 385 AGKAKAVTATARKIAVLFYNTLRHGISYKDPGADHY-----EEQYRSRVLANLKRRAKSL 439 A KA+ A K+ V+ ++ L G +D GAD++ ++ R R++A L+ A+ L Sbjct: 268 AANKKAIXXVAHKLIVIIWHVLATGRPXQDLGADYFTTRMDPDKERRRLVAKLE--AQGL 325 Query: 440 GFVLQ 444 G L+ Sbjct: 326 GVTLE 330 >Rv2177c [L] COG3547 Transposase and inactivated derivatives Mtu Mycobacterium tuberculosis H37Rv Length = 221 Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 15/162 (9%) Query: 296 LTEIHGLGPSLALKLIGECGTDLRAW-PTAKHFTSWLCLAPGNKISGGKVLSSRTRRSSS 354 + I G+G + +I E G D AW P+A+H SW+ L PGN S GK R + Sbjct: 59 IASIPGIGVGASATVISEIGADPAAWFPSAEHLASWVRLCPGNHESAGKRHHGARRTGNQ 118 Query: 355 RAAALLRLAATTIGRSDTALGAFYRR-------LSSRAGKAKAVTATARKIAVLFYNTLR 407 +L A R+D L +YRR S A KA+ A A K+ V+ ++ L Sbjct: 119 HLQPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSPAANKKAIIAVAHKLIVIIWHVLA 178 Query: 408 HGISYKDPGADHY-----EEQYRSRVLANLKRRAKSLGFVLQ 444 G Y+D GAD++ ++ R R++A L+ A+ LG L+ Sbjct: 179 TGRPYQDLGADYFTTRMDPDKERRRLVAKLE--AQGLGVTLE 218 >MT2233 [L] COG3547 Transposase and inactivated derivatives MtC Mycobacterium tuberculosis CDC1551 Length = 221 Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 15/162 (9%) Query: 296 LTEIHGLGPSLALKLIGECGTDLRAW-PTAKHFTSWLCLAPGNKISGGKVLSSRTRRSSS 354 + I G+G + +I E G D AW P+A+H SW+ L PGN S GK R + Sbjct: 59 IASIPGIGVGASATVISEIGADPAAWFPSAEHLASWVRLCPGNHESAGKRHHGARRTGNQ 118 Query: 355 RAAALLRLAATTIGRSDTALGAFYRR-------LSSRAGKAKAVTATARKIAVLFYNTLR 407 +L A R+D L +YRR S A KA+ A A K+ V+ ++ L Sbjct: 119 HLQPVLVECAWAAVRTDGYLREYYRRQVRKFGGFRSPAANKKAIIAVAHKLIVIIWHVLA 178 Query: 408 HGISYKDPGADHY-----EEQYRSRVLANLKRRAKSLGFVLQ 444 G Y+D GAD++ ++ R R++A L+ A+ LG L+ Sbjct: 179 TGRPYQDLGADYFTTRMDPDKERRRLVAKLE--AQGLGVTLE 218 >SSO1556 [L] COG3547 Transposase and inactivated derivatives Sso Sulfolobus solfataricus Length = 245 Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 7/150 (4%) Query: 21 AIDIG-SKIHMAAVDPICT----DTPVRAFGTFTQDLHDLADWFKACGVTSVA-MESTGV 74 AID+ K+ +A + + T + V F D + + K G MESTG Sbjct: 11 AIDVSRDKLTVAKAELVITQEKREVEVNEVREFKYDNEGIEELIKFLGEYKEGIMESTGP 70 Query: 75 YWIPAYEILEQRGFEVILVNARYAKNVPGRKTDVSDAAWLRQLHSYGLLRGSFRPDAEIA 134 Y+ +E L ++G++V L+N + K V G+KTD DA L + G ++GS+ P EI Sbjct: 71 YFFYLHEELTEKGYKVTLINPLHLKEVFGKKTDKLDAQRLAKAFILGAVKGSYIPTGEIR 130 Query: 135 TLRAYLRQRERLVEYAAAHIQHMQKALMEM 164 LR R RE L+ +++ + +EM Sbjct: 131 ELRELTRYRESLMR-KITQVKNEIRKFLEM 159