BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0120.0023.p         (77 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGpA136 [L] COG3666 Transposase and inactivated derivatives Atu ...    91   6e-19

>AGpA136 [L] COG3666 Transposase and inactivated derivatives Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 234

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 39/60 (65%), Positives = 51/60 (85%)

Query: 3   DHSTFSKNRHRRFRQSDLFRRVFESVLRRCIEERLVGGEGFAVDASLVKADANRQKAIEG 62
           DHS+FSKNRH RFRQSD+ R +FE+V+ RC+ + LVG EGFAVDASL+ ADAN+Q+++ G
Sbjct: 103 DHSSFSKNRHGRFRQSDILRHMFETVVERCLAQGLVGAEGFAVDASLIAADANKQRSVPG 162