BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0119.0021.p (401 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ECs4142 [E] COG4597 ABC-type amino acid transport system, permea... 368 e-101 ZyhdX [E] COG4597 ABC-type amino acid transport system, permease... 368 e-101 VC1361 [E] COG4597 ABC-type amino acid transport system, permeas... 361 2e-99 BMEI1210 [E] COG4597 ABC-type amino acid transport system, perme... 336 6e-92 mlr8151 Non COG 335 2e-91 >ECs4142 [E] COG4597 ABC-type amino acid transport system, permease component Ecs Escherichia coli O157:H7 Length = 399 Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/347 (55%), Positives = 244/347 (70%) Query: 49 NARANLETQRIASGFGFLKNNAGFDVSLNLIPYSGSDTYTRVFFVGLFNTLLVAGIGIVF 108 N NL + I SGF FL AGF + +LI Y DTY RVF VGL NTLLV+ + IVF Sbjct: 48 NTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVF 107 Query: 109 ATIIGFIVALCRLSPNWLLARLGEIYVEIVRNLPLLFQLLFWYLAVLAALPGPRQSISLF 168 A+++GF + L RLS NWLL +L IY+EI RN+P L Q+ FWY AVL LPGPRQ++S F Sbjct: 108 ASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSAF 167 Query: 169 NAFFLSNRGLVIPRPIGEAGLDPFLIALAIAIAGALALRGYARRALFQRGQAIRIWPYVL 228 + FLSNRGL IP P G F++A+ +AI ++ L + + + GQ R WP Sbjct: 168 DLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAA 227 Query: 229 GLLAGLPLVTTLVFGLPMTFELPQLKGFNFAGGARVIPELVALVVALSTYTAAFIAEIVR 288 L+ GLPL+ +FG + +++P L+GFNF GG +IPEL AL +ALS YT+AFIAEI+R Sbjct: 228 VLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIR 287 Query: 289 AGILSVHKGQMEAGSSLGLSRGTTLRLIVVPQAMRVIVPPLTNQYLNLTKNSSLAVAIGY 348 AGI +V GQ EA SLGL TLR +++PQA+RVI+PPLT+QYLN+ KNSSLA AIGY Sbjct: 288 AGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGY 347 Query: 349 PDLVSVFAGTTLSQTGQAIEIIAITMGVYLLISLVTSAIMSVYGWRI 395 PD+VS+FAGT L+QTGQAIE IA+TM VYL+ISL S +M++Y RI Sbjct: 348 PDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRI 394 >ZyhdX [E] COG4597 ABC-type amino acid transport system, permease component EcZ Escherichia coli O157:H7 EDL933 Length = 393 Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/347 (55%), Positives = 244/347 (70%) Query: 49 NARANLETQRIASGFGFLKNNAGFDVSLNLIPYSGSDTYTRVFFVGLFNTLLVAGIGIVF 108 N NL + I SGF FL AGF + +LI Y DTY RVF VGL NTLLV+ + IVF Sbjct: 42 NTVTNLNNRGITSGFAFLDRGAGFGIVQHLIDYQQGDTYGRVFIVGLLNTLLVSALCIVF 101 Query: 109 ATIIGFIVALCRLSPNWLLARLGEIYVEIVRNLPLLFQLLFWYLAVLAALPGPRQSISLF 168 A+++GF + L RLS NWLL +L IY+EI RN+P L Q+ FWY AVL LPGPRQ++S F Sbjct: 102 ASVLGFFIGLARLSDNWLLRKLSTIYIEIFRNIPPLLQIFFWYFAVLRNLPGPRQAVSAF 161 Query: 169 NAFFLSNRGLVIPRPIGEAGLDPFLIALAIAIAGALALRGYARRALFQRGQAIRIWPYVL 228 + FLSNRGL IP P G F++A+ +AI ++ L + + + GQ R WP Sbjct: 162 DLAFLSNRGLYIPSPQLGDGFIAFILAVVMAIVLSVGLFRFNKTYQIKTGQLRRTWPIAA 221 Query: 229 GLLAGLPLVTTLVFGLPMTFELPQLKGFNFAGGARVIPELVALVVALSTYTAAFIAEIVR 288 L+ GLPL+ +FG + +++P L+GFNF GG +IPEL AL +ALS YT+AFIAEI+R Sbjct: 222 VLIIGLPLLAQWLFGAALHWDVPALQGFNFRGGMVLIPELAALTLALSVYTSAFIAEIIR 281 Query: 289 AGILSVHKGQMEAGSSLGLSRGTTLRLIVVPQAMRVIVPPLTNQYLNLTKNSSLAVAIGY 348 AGI +V GQ EA SLGL TLR +++PQA+RVI+PPLT+QYLN+ KNSSLA AIGY Sbjct: 282 AGIQAVPYGQHEAARSLGLPNPVTLRQVIIPQALRVIIPPLTSQYLNIVKNSSLAAAIGY 341 Query: 349 PDLVSVFAGTTLSQTGQAIEIIAITMGVYLLISLVTSAIMSVYGWRI 395 PD+VS+FAGT L+QTGQAIE IA+TM VYL+ISL S +M++Y RI Sbjct: 342 PDMVSLFAGTVLNQTGQAIETIAMTMSVYLIISLTISLLMNIYNRRI 388 >VC1361 [E] COG4597 ABC-type amino acid transport system, permease component Vch Vibrio cholerae Length = 401 Score = 361 bits (927), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 195/364 (53%), Positives = 261/364 (71%) Query: 32 QIVFAAVLAWVAYEIVANARANLETQRIASGFGFLKNNAGFDVSLNLIPYSGSDTYTRVF 91 Q++ VLA+ Y IV NA NLE++ IA+GF FL+ AGF +S +LIPY + +Y R F Sbjct: 33 QLLAVCVLAFFLYTIVNNALTNLESRGIATGFAFLEQTAGFGISQSLIPYDETYSYGRTF 92 Query: 92 FVGLFNTLLVAGIGIVFATIIGFIVALCRLSPNWLLARLGEIYVEIVRNLPLLFQLLFWY 151 VGL NT LV+ +GI+ ATI+GF++ + RLS NWL++RL +Y+E RNLPLL Q+ FWY Sbjct: 93 LVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLLQIFFWY 152 Query: 152 LAVLAALPGPRQSISLFNAFFLSNRGLVIPRPIGEAGLDPFLIALAIAIAGALALRGYAR 211 VL ALP R+S+ L F+L+ +GL + +PI E+G L+AL I L +A Sbjct: 153 FVVLQALPSARESMHLGEWFYLNIKGLYLAKPIFESGSIWVLVALIAGIIACWVLSIWAT 212 Query: 212 RALFQRGQAIRIWPYVLGLLAGLPLVTTLVFGLPMTFELPQLKGFNFAGGARVIPELVAL 271 GQ + Y+L L P++ + G P+T E P L+GFNF GG V+PEL AL Sbjct: 213 NRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQPITAEYPVLRGFNFQGGISVLPELAAL 272 Query: 272 VVALSTYTAAFIAEIVRAGILSVHKGQMEAGSSLGLSRGTTLRLIVVPQAMRVIVPPLTN 331 +VAL+ YTA+FIAEIVR+GI +V GQ EA SLGL+R TL+L+++PQA+R+I+PPLT+ Sbjct: 273 LVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVIIPQALRIIIPPLTS 332 Query: 332 QYLNLTKNSSLAVAIGYPDLVSVFAGTTLSQTGQAIEIIAITMGVYLLISLVTSAIMSVY 391 QYLNLTKNSSLA+AIGYPDLVSVFAGTTL+QTGQAIEII++TM VYL +SL+TSA+M++Y Sbjct: 333 QYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYLTLSLLTSALMNLY 392 Query: 392 GWRI 395 ++ Sbjct: 393 NRKV 396 >BMEI1210 [E] COG4597 ABC-type amino acid transport system, permease component Bme Brucella melitensis Length = 397 Score = 336 bits (861), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 180/357 (50%), Positives = 244/357 (68%), Gaps = 2/357 (0%) Query: 33 IVFAAVLAWVAYEIVANARANLETQRIASGFGFLKNNAGFDVSLNLIPYSGSDTYTRVFF 92 +VF AV+A + Y IV N NL+ IASGFGFL AGFD+S LI Y+ TY R F Sbjct: 32 VVFGAVIAGI-YWIVGNTITNLQRANIASGFGFLYGRAGFDISQTLIQYNSDSTYGRAFL 90 Query: 93 VGLFNTLLVAGIGIVFATIIGFIVALCRLSPNWLLARLGEIYVEIVRNLPLLFQLLFWYL 152 VGL NTL VA +G+V A+IIGF+V + RLS NWL+ + +YVE+ RN+P L + FWY Sbjct: 91 VGLVNTLYVAALGVVTASIIGFLVGIGRLSHNWLIRNICTVYVEVFRNIPPLLVIFFWYF 150 Query: 153 AVLAALPGPRQSISLFNAFFLSNRGLVIPRPIGEAGLDPFLIALAIAIAGALALRGYARR 212 VL+ LP RQS S+ + +++NRG +P P+ G +AL I I + A+ +A+R Sbjct: 151 GVLSVLPPVRQSYSMPLSTYINNRGFFMPSPVWGEGAWAVPVALLIGILASFAVARWAKR 210 Query: 213 ALFQRGQAIRIWPYVLGLLAGLPLVTTLVFGLPMTFELPQLKGFNFAGGARVIPELVALV 272 GQ L+ GLP++ + G P++F++P+L FN GGA++ PE +AL Sbjct: 211 RQMATGQPFHTIRVSAALIIGLPILALIATGFPVSFDVPKLGTFNLTGGAQIKPEFLALF 270 Query: 273 VALSTYTAAFIAEIVRAGILSVHKGQMEAGSSLGLSRGTTLRLIVVPQAMRVIVPPLTNQ 332 +ALS YTA+FIAE VRAG+L V KGQ EA ++GL G T+RLI+VPQA+R+I+PPL++Q Sbjct: 271 LALSFYTASFIAETVRAGVLGVSKGQTEAAYAVGLRSGQTMRLIIVPQALRIIIPPLSSQ 330 Query: 333 YLNLTKNSSLAVAIGYPDLVSVFAGTTLSQTGQAIEIIAITMGVYLLISLVTSAIMS 389 YLNL KNSSLA+AIGYPDLV+V GT L+QTGQA+E++AI M +YL ISL+ S +M+ Sbjct: 331 YLNLIKNSSLAIAIGYPDLVAV-GGTILNQTGQAVEVVAIWMVIYLGISLIVSGLMN 386 >mlr8151 Non COG Length = 395 Score = 335 bits (858), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 185/367 (50%), Positives = 245/367 (66%), Gaps = 6/367 (1%) Query: 29 LAVQIVFAAVLAWVAYEIVANARANLETQRIASGFGFLKNNAGFDVSLNLIPYSGSDTYT 88 L V ++F +V + IV N NL+ IASGFGFL+ AGFD+S I Y+ TY Sbjct: 30 LVVIVLFGSV-----WWIVQNVIDNLQRLHIASGFGFLRGRAGFDISDTPIAYTSDSTYG 84 Query: 89 RVFFVGLFNTLLVAGIGIVFATIIGFIVALCRLSPNWLLARLGEIYVEIVRNLPLLFQLL 148 R VGL NT++VA GI+ ATIIGF++ + RLS NWL+ ++ +YVE+ RN+P L + Sbjct: 85 RAIVVGLINTVIVAVAGIITATIIGFVIGIGRLSQNWLIQKICTVYVEVFRNIPPLLVIF 144 Query: 149 FWYLAVLAALPGPRQSISLFNAFFLSNRGLVIPRPIGEAGLDPFLIALAIAIAGALALRG 208 FWY VLA LP PR S L FL+ RG PRP+ G ++AL + IA A + Sbjct: 145 FWYSGVLAVLPAPRDSYHLPFGSFLNQRGFYFPRPVWGEGSWLIVVALLVGIAMAWFVAR 204 Query: 209 YARRALFQRGQAIRIWPYVLGLLAGLPLVTTLVFGLPMTFELPQLKGFNFAGGARVIPEL 268 AR+ GQ + + L+ GLPL+ ++ G P++F+LP+ FN GG +V PE Sbjct: 205 TARQRQMATGQQFPVLWTSVALIVGLPLLAYVLSGFPLSFDLPKQSTFNLTGGFQVKPEF 264 Query: 269 VALVVALSTYTAAFIAEIVRAGILSVHKGQMEAGSSLGLSRGTTLRLIVVPQAMRVIVPP 328 ++L +ALS YTAAFIAEIVRAGI V KGQ EA ++LGL G+ LRL+VVPQAMR+++PP Sbjct: 265 LSLYLALSCYTAAFIAEIVRAGIRGVSKGQTEAAAALGLRSGSILRLVVVPQAMRIVIPP 324 Query: 329 LTNQYLNLTKNSSLAVAIGYPDLVSVFAGTTLSQTGQAIEIIAITMGVYLLISLVTSAIM 388 LT+QYLNLTKNSSLA+AIGYPDL + AGT L+QTGQA+E + I M YL++SLVTSA+M Sbjct: 325 LTSQYLNLTKNSSLAIAIGYPDLTAT-AGTVLNQTGQAVEGVLIMMIAYLILSLVTSAVM 383 Query: 389 SVYGWRI 395 +V R+ Sbjct: 384 NVVNARM 390