BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0011.p (318 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value all2012 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 367 e-101 sll1768 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 313 3e-85 BS_appB [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 253 3e-67 CAC3180 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 244 3e-64 CAC0177 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel tran... 235 1e-61 >all2012 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Nos Nostoc sp. PCC 7120 Length = 335 Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust. Identities = 176/319 (55%), Positives = 244/319 (76%), Gaps = 3/319 (0%) Query: 1 MSQYILRRLMIAIPSLLGISLVLFVVLALAPGDPFSELATNPNVPPEVQAALRAKFGLDD 60 M++Y++ RL++AIP+L+ ISLV+F +LALAPGDP E A NP++ EV+ ++ GLD Sbjct: 16 MNKYLINRLLVAIPTLIAISLVIFTILALAPGDPMGEFALNPSITAEVRENIKRSLGLDQ 75 Query: 61 PIYLRYLHWLAAMAQGDWGFSFVSRINVDTLILQRLPTTLYVIGSAQLLALLIAIPVGVY 120 PI++RY+ W+ A +GD G+SF SR V LILQRLPTTL+V+G+A LL ++AIP+GV Sbjct: 76 PIHIRYIKWVIAFVRGDMGYSFTSRSPVIDLILQRLPTTLWVVGAAYLLGAILAIPLGVI 135 Query: 121 AATRPYSIFDQLANTFAFIGFSLPTFFTGILFILVFSVKLDWLPFVYTDVPGSGIPW--L 178 +A + ++I D + T F GFSLPTFFTG+LFI++FS++L WLPF+Y W Sbjct: 136 SALKRHTIIDHVLTTLVFFGFSLPTFFTGLLFIIIFSIQLKWLPFIYNSTLQVK-DWQSF 194 Query: 179 LEMIRQAIMPVMVLGLFQAASMTRFVRSAMLDVIRLDYVTTARAKGLGQAKVIVKHVMRN 238 + I+Q+IMP+ VL L+Q A + RFVRS +L+ I DYV TA AKGL + VI +H++RN Sbjct: 195 IAQIQQSIMPISVLALWQTAMLMRFVRSEILENIHQDYVRTAYAKGLSKFVVIRRHILRN 254 Query: 239 AMIPVVTLIALQMPAVFGGAIVTEQIFRIPGIGSLLISSILANDTPVVMAVTFVFACLVV 298 A+IPVVTLIAL +P+VF GA+VTE++FR+PGIG+LLI SI NDTPVVMA+TF++A L+V Sbjct: 255 ALIPVVTLIALDIPSVFTGALVTEKVFRVPGIGALLIDSIYKNDTPVVMAITFIYAILIV 314 Query: 299 LFNLIADVLYGWLDPRISF 317 +FNL+AD+LYG+LDPR+ + Sbjct: 315 IFNLVADILYGFLDPRVKY 333 >sll1768 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Syn Synechocystis Length = 326 Score = 313 bits (803), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 166/314 (52%), Positives = 231/314 (73%), Gaps = 1/314 (0%) Query: 5 ILRRLMIAIPSLLGISLVLFVVLALAPGDPFSELATNPNVPPEVQAALRAKFGLDDPIYL 64 I +RL IA+ +LLGISLV+F +LALAPG+P ELATNP++ EV+ LR GLD + + Sbjct: 13 ICKRLAIAVITLLGISLVIFSLLALAPGNPLGELATNPSISQEVRDNLRRSLGLDQALPI 72 Query: 65 RYLHWLAAMAQGDWGFSFVSRINVDTLILQRLPTTLYVIGSAQLLALLIAIPVGVYAATR 124 RYL WL ++ QGD G+SF SR V LI QRLPTTL+++G+A L++L IAIP+GV AA Sbjct: 73 RYLKWLWSLLQGDLGYSFTSRSPVIDLIGQRLPTTLWLMGTAYLISLAIAIPLGVTAALY 132 Query: 125 PYSIFDQLANTFAFIGFSLPTFFTGILFILVFSVKLDWLPFVY-TDVPGSGIPWLLEMIR 183 ++ L + + +GFSLPTF TG+LFIL+FSV+L WLPF+Y + + + L IR Sbjct: 133 RGRWWEPLISGISLMGFSLPTFLTGLLFILIFSVQLRWLPFIYDSTLTVDSMASLGTQIR 192 Query: 184 QAIMPVMVLGLFQAASMTRFVRSAMLDVIRLDYVTTARAKGLGQAKVIVKHVMRNAMIPV 243 Q +MPV VL +Q+A + RFVRSA L+ + +Y+ TA AKGLG ++ H+++NA +P+ Sbjct: 193 QLLMPVGVLVFYQSAVILRFVRSAALEELPQNYIRTAYAKGLGTWGMLKNHLLKNASLPL 252 Query: 244 VTLIALQMPAVFGGAIVTEQIFRIPGIGSLLISSILANDTPVVMAVTFVFACLVVLFNLI 303 +TLIAL +P +F GA+VTEQ+FR+PGIG+LLI SI +DTPVVMAVTF++A L+V F+ + Sbjct: 253 ITLIALDVPTIFTGALVTEQVFRVPGIGALLIESIYRSDTPVVMAVTFLYAVLIVFFSSL 312 Query: 304 ADVLYGWLDPRISF 317 AD++Y +DPRI + Sbjct: 313 ADLIYQLVDPRIRW 326 >BS_appB [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Bsu Bacillus subtilis Length = 317 Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 135/319 (42%), Positives = 201/319 (63%), Gaps = 4/319 (1%) Query: 1 MSQYILRRLMIAIPSLLGISLVLFVVLALAPGDPFSELATNPNVPPEVQAALRAKFGLDD 60 M+ YI+RR +++IP LLGI+++ FV++ APGDP + L +P + + K+GL+D Sbjct: 1 MAAYIIRRTLMSIPILLGITILSFVIMKAAPGDPMT-LMMDPKISQADREQFIEKYGLND 59 Query: 61 PIYLRYLHWLAAMAQGDWGFSFVSR-INVDTLILQRLPTTLYVIGSAQLLALLIAIPVGV 119 P Y++YL WL M QGD+G S V + V LI+ RLP TL ++ + +LAL+I+IP GV Sbjct: 60 PQYVQYLKWLGNMVQGDFGTSIVRKGTPVSELIMARLPNTLLLMLVSTILALMISIPFGV 119 Query: 120 YAATRPYSIFDQLANTFAFIGFSLPTFFTGILFILVFSVKLDWLPFVYTDVPGSGIPWLL 179 +A RPYS D +FIG ++P F+ G++ I+V SV L W P + + + Sbjct: 120 LSAKRPYSKIDYGITFTSFIGLAIPNFWFGLILIMVLSVNLGWFPTGGVETLNTEFN-IF 178 Query: 180 EMIRQAIMPVMVLGLFQAASMTRFVRSAMLDVIRLDYVTTARAKGLGQAKVIVKHVMRNA 239 + I I+P VL A +TR+ RS MLDV+ DY+ TARAKG + +V+ KH +RNA Sbjct: 179 DRIHHLILPAFVLATADMAGLTRYTRSNMLDVLNQDYIRTARAKGFKENRVLFKHGLRNA 238 Query: 240 MIPVVTLIALQMPAVFGGAIVTEQIFRIPGIGSLLISSILAND-TPVVMAVTFVFACLVV 298 ++PV+T+ L +P+ GG++V EQIF PG+G L + S ++MA+T + A LVV Sbjct: 239 LLPVITIFGLMIPSFIGGSVVVEQIFTWPGLGKLFVDSAFQRTIIRIIMAMTVISAVLVV 298 Query: 299 LFNLIADVLYGWLDPRISF 317 + NLIAD+LY +DPRI + Sbjct: 299 VGNLIADILYAIVDPRIEY 317 >CAC3180 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Cac Clostridium acetobutylicum Length = 318 Score = 244 bits (622), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 128/318 (40%), Positives = 193/318 (60%), Gaps = 6/318 (1%) Query: 1 MSQYILRRLMIAIPSLLGISLVLFVVLALAPGDPFSELATNPNVPPEVQAALRAKFGLDD 60 M +YILRR + IP+L+G+S+++F + +L PGD + +N N+ P+ LR G D Sbjct: 1 MKKYILRRFLQMIPTLIGVSIIIFYLFSLMPGD---YIDSNRNLTPQRAHELRVLNGFDK 57 Query: 61 PIYLRYLHWLAAMAQGDWGFSFVSRINVDTLILQRLPTTLYVIGSAQLLALLIAIPVGVY 120 PI +RYL WL + GD+GFS V TLI Q + + + +L IA+ +G++ Sbjct: 58 PIIVRYLIWLRNILHGDFGFSLKYLEPVTTLINQYIWNSFIIAIVTLILTWSIALVIGIF 117 Query: 121 AATRPYSIFDQLANTFAFIGFSLPTFFTGILFILVFSVKLDWLP---FVYTDVPGSGIPW 177 +AT+ YS FD++ F S P+FF G+L I F V L LP V T G+ Sbjct: 118 SATKQYSFFDRVITLLVFASLSFPSFFIGLLMIKFFGVDLKILPIGGMVETGSTTIGLSH 177 Query: 178 LLEMIRQAIMPVMVLGLFQAASMTRFVRSAMLDVIRLDYVTTARAKGLGQAKVIVKHVMR 237 +LE+IR I+PV +L S+TR+ RS+MLDV++ D++ TARA GL + K+I KH ++ Sbjct: 178 ILEVIRHMILPVGILTFLSIGSLTRYFRSSMLDVLKQDFIRTARANGLKERKIIFKHALK 237 Query: 238 NAMIPVVTLIALQMPAVFGGAIVTEQIFRIPGIGSLLISSILANDTPVVMAVTFVFACLV 297 NA++P +TL++ ++P +F GAI+TEQIF PGIG + + ++ D PV+M T + + L Sbjct: 238 NAILPAITLLSFELPGLFSGAIITEQIFNWPGIGRIQLEALSFRDYPVLMTFTMLLSFLT 297 Query: 298 VLFNLIADVLYGWLDPRI 315 + N AD+LY DPRI Sbjct: 298 IFGNFCADILYAAADPRI 315 >CAC0177 [EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Cac Clostridium acetobutylicum Length = 322 Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 123/318 (38%), Positives = 195/318 (61%), Gaps = 3/318 (0%) Query: 1 MSQYILRRLMIAIPSLLGISLVLFVVLALAPGDPFSELATNPNVPPEVQAALRAKFGLDD 60 M +YI++RL+ IP L+G+S+V+F++ +LAPGD + N ++ + LR + LD Sbjct: 1 MLRYIVKRLLQMIPILIGVSIVIFIIFSLAPGDIVDNMGVNSHMTTAKASQLRHLYHLDK 60 Query: 61 PIYLRYLHWLAAMAQGDWGFSFVSRINVDTLILQRLPTTLYVIGSAQLLALLIAIPVGVY 120 L+YL+W+ A G++G+S R V T+I + + + + + A+++AIP+G+ Sbjct: 61 SKPLQYLYWIKDAASGNFGYSLEYRQPVSTVIKSYIWNSFILSFMSFIAAIVLAIPIGIV 120 Query: 121 AATRPYSIFDQLANTFAFIGFSLPTFFTGILFILVFSVKLDWLPFVYTDVPGS---GIPW 177 +AT+ YS FD + A IG S+P FF G+L I F + P GS GI Sbjct: 121 SATKQYSAFDSIFTVIALIGISIPAFFMGLLLIKWFCIDFKIFPVSGMTTSGSNAAGIKK 180 Query: 178 LLEMIRQAIMPVMVLGLFQAASMTRFVRSAMLDVIRLDYVTTARAKGLGQAKVIVKHVMR 237 +++ +P +VL AS+ R++R++ML+VIR DY+ TARAKGL + VI KH +R Sbjct: 181 FGDILYHMFLPFLVLTFESVASLMRYMRTSMLEVIRQDYIRTARAKGLKEKVVIYKHALR 240 Query: 238 NAMIPVVTLIALQMPAVFGGAIVTEQIFRIPGIGSLLISSILANDTPVVMAVTFVFACLV 297 N++IPV+T++ + +P +F GAI+TEQIF PGIG + + ++ D P++M T + A L Sbjct: 241 NSLIPVITILGMWLPGLFCGAIITEQIFSWPGIGRVTLQAVSHRDYPLLMGFTMLIAVLT 300 Query: 298 VLFNLIADVLYGWLDPRI 315 +L NL+ADV Y +DPRI Sbjct: 301 LLGNLVADVAYAVVDPRI 318