BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0008.p (325 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DR1568 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 366 e-101 CAC0179 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tran... 363 e-100 BH0028 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 361 1e-99 CAC3629 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tran... 357 2e-98 BS_oppD [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tran... 355 8e-98 >DR1568 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Dra Deinococcus radiodurans Length = 386 Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/329 (55%), Positives = 238/329 (72%), Gaps = 13/329 (3%) Query: 3 LLDIKGLKTHFSTDDGILQAVDGVDISINRGETLCVVGESGCGKTVTAMSILKLIAMPPG 62 LL + LKT+F+TDDG++++VDGV I +GETL VVGESG GK+VT++++++LI MPPG Sbjct: 33 LLAVNNLKTYFNTDDGVVKSVDGVTFHIKKGETLAVVGESGSGKSVTSLTVMRLIPMPPG 92 Query: 63 KIVEGEIIFEGRD-----LVPLTSHQLDDIRAKEIGFIFQEPMTSLNPVLTIGEQIAESL 117 +I GEI+F G+D LV ++ ++ IR +I IFQEPMTSLNPV T+G+QIAE++ Sbjct: 93 QIAGGEILFTGKDGVQRNLVNVSEAEMRRIRGNDISMIFQEPMTSLNPVYTVGDQIAEAV 152 Query: 118 HRHEAVTKKQALERTIEMLKLVQIPNAAGRVHHYPHQFSGGMRQRVMIAMALACRPKLVI 177 H+ T+K+A++ +ML+ V IP RV+ YPHQ SGGMRQRVMIAMAL+C+P L+I Sbjct: 153 VLHQGKTRKEAMDVATDMLRFVGIPAPEKRVNEYPHQMSGGMRQRVMIAMALSCKPALLI 212 Query: 178 ADEPTTALDVTIQAQILDLLQDMKERFGMAVMLITHAMGVVAETAQRVVVMYAGKVVEEA 237 ADEPTTALDVTIQAQILDL+++++ GM+++ ITH +GVVAE A RVVVMY G+VVEE Sbjct: 213 ADEPTTALDVTIQAQILDLMRNLQREVGMSILFITHNLGVVAEMADRVVVMYGGRVVEEG 272 Query: 238 PVDELFGNPGHPYTQGLIRSIPRIDLDAEH-------KTRLEAIGGSVPILINPPPGCRF 290 V E+F P HPYT GL+ SIPR D EH K RLEAI G+VP +N PPGC F Sbjct: 273 DVIEIFKAPRHPYTMGLLNSIPRPSED-EHAHVPGQPKKRLEAIPGNVPNPLNLPPGCTF 331 Query: 291 AARCKYAMSICTEKEPRLREIAPGHRMAC 319 RCK+A+ C++ P L + GH C Sbjct: 332 EPRCKFAVPQCSQAVPALEDTGGGHMARC 360 >CAC0179 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Cac Clostridium acetobutylicum Length = 325 Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust. Identities = 173/320 (54%), Positives = 235/320 (73%), Gaps = 3/320 (0%) Query: 2 ALLDIKGLKTHFSTDDGILQAVDGVDISINRGETLCVVGESGCGKTVTAMSILKLIAMPP 61 LL +K LKT+F T++G ++AVD V I ETL +VGESGCGK++TAMSI++LI PP Sbjct: 4 TLLQVKNLKTYFHTEEGTVKAVDDVSFEIKEKETLAIVGESGCGKSITAMSIMRLIPNPP 63 Query: 62 GKIVEGEIIFEGRDLVPLTSHQLDDIRAKEIGFIFQEPMTSLNPVLTIGEQIAESLHRHE 121 GKI GEI+F+G+DL+ + + +IR +I IFQEPMTSLNPV T+GEQI E+L H+ Sbjct: 64 GKIEGGEILFDGKDLIKMRQSDIREIRGNKISLIFQEPMTSLNPVFTVGEQIEEALILHK 123 Query: 122 AVTKKQALERTIEMLKLVQIPNAAGRVHHYPHQFSGGMRQRVMIAMALACRPKLVIADEP 181 + KKQA I+ML +V+IP A YPH+ SGGMRQRV+IAMA++C P+L+IADEP Sbjct: 124 KMDKKQAKREAIKMLTMVRIPRAEEIYKAYPHELSGGMRQRVVIAMAISCSPRLLIADEP 183 Query: 182 TTALDVTIQAQILDLLQDMKERFGMAVMLITHAMGVVAETAQRVVVMYAGKVVEEAPVDE 241 TTALDVTIQAQILD+++++KE+ +++LITH +G+VAE A VVVMYAGK+VE+APV E Sbjct: 184 TTALDVTIQAQILDIMRELKEKVNTSIILITHDLGIVAEMADYVVVMYAGKIVEKAPVIE 243 Query: 242 LFGNPGHPYTQGLIRSIPRIDLDAEHKTRLEAIGGSVPILINPPPGCRFAARCKYAMSIC 301 L+ NP HPYT GL++S P I+ + +L +I G VP ++ P GC F RC A IC Sbjct: 244 LYKNPKHPYTVGLLKSKPVIN---RLQDKLYSIEGQVPNPLDMPEGCYFNPRCSKAKDIC 300 Query: 302 TEKEPRLREIAPGHRMACHL 321 +K+P L++++ GH ++C L Sbjct: 301 RKKQPNLKKVSEGHSVSCWL 320 >BH0028 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Bha Bacillus halodurans Length = 347 Score = 361 bits (927), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 179/320 (55%), Positives = 235/320 (73%), Gaps = 2/320 (0%) Query: 2 ALLDIKGLKTHFSTDDGILQAVDGVDISINRGETLCVVGESGCGKTVTAMSILKLIAMPP 61 +L+++ L+T F T+ ++AVDGV S+ +G+TL +VGESG GK++T++SILKLI P Sbjct: 11 TILEVRDLRTSFFTEAFEVKAVDGVTFSVPKGKTLGIVGESGSGKSITSLSILKLI-QEP 69 Query: 62 GKIVEGEIIFEGRDLVPLTSHQLDDIRAKEIGFIFQEPMTSLNPVLTIGEQIAESLHRHE 121 GK+V GEI F+G +LV + IR EI IFQEPMTSLNPV T+G+QI+ES HE Sbjct: 70 GKVVGGEINFKGENLVTKNEAYMRKIRGNEISMIFQEPMTSLNPVYTVGQQISESFRIHE 129 Query: 122 AVTKKQALERTIEMLKLVQIPNAAGRVHHYPHQFSGGMRQRVMIAMALACRPKLVIADEP 181 + KK+AL+R+++MLKLV IP+ RVH YPH+ SGGMRQRVMIAMALAC P+L+IADEP Sbjct: 130 KLGKKEALKRSVDMLKLVGIPSPEKRVHQYPHELSGGMRQRVMIAMALACNPELLIADEP 189 Query: 182 TTALDVTIQAQILDLLQDMKERFGMAVMLITHAMGVVAETAQRVVVMYAGKVVEEAPVDE 241 TTALDVTIQAQIL+L++D+++R GM++++ITH +GVVAET V VMY GKVVE A V Sbjct: 190 TTALDVTIQAQILELMKDLQDRLGMSIIMITHDLGVVAETCDYVAVMYCGKVVEYADVKT 249 Query: 242 LFGNPGHPYTQGLIRSIPRIDLDAEHKTRLEAIGGSVPILINPPPGCRFAARCKYAMSIC 301 LF NP HPYT GL+ S+PR D+D E + L I G+VP + P GCRFA RC +A IC Sbjct: 250 LFKNPRHPYTVGLLNSLPRHDIDLEDE-ELSVIKGNVPSPADMPEGCRFAPRCPFASDIC 308 Query: 302 TEKEPRLREIAPGHRMACHL 321 E+ P L G+++ C + Sbjct: 309 KERLPDLETDENGNQIRCWV 328 >CAC3629 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Cac Clostridium acetobutylicum Length = 339 Score = 357 bits (917), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 167/323 (51%), Positives = 234/323 (72%), Gaps = 3/323 (0%) Query: 3 LLDIKGLKTHFSTDDGILQAVDGVDISINRGETLCVVGESGCGKTVTAMSILKLIAMPPG 62 +L++K LK + T G +Q+V GV +N+ ETL +VGESGCGK+VT+ SI++LI PPG Sbjct: 4 VLEVKNLKVSYHTYAGEVQSVRGVSFHLNKSETLAIVGESGCGKSVTSKSIMRLIDCPPG 63 Query: 63 KIVEG-EIIFEGRDLVPLTSHQLDDIRAKEIGFIFQEPMTSLNPVLTIGEQIAESLHRHE 121 +I EG EI+F +D++ + +L +R +I IFQ+PMTSLNP + +G+QIAES+ H+ Sbjct: 64 EIKEGSEILFGDKDILKMDDKELSKLRGGDISMIFQDPMTSLNPTMKVGKQIAESIMIHK 123 Query: 122 AVTKKQALERTIEMLKLVQIPNAAGRVHHYPHQFSGGMRQRVMIAMALACRPKLVIADEP 181 + +K+A + I+ML+ V IPNA R + YPHQFSGGMRQR MIA+ALAC PK++IADEP Sbjct: 124 GLKEKEAFKEAIKMLEAVNIPNADKRANQYPHQFSGGMRQRAMIAIALACTPKILIADEP 183 Query: 182 TTALDVTIQAQILDLLQDMKERFGMAVMLITHAMGVVAETAQRVVVMYAGKVVEEAPVDE 241 TTALDVTIQAQI+DL+ +++E+ G A++LITH +GVVA A R+ VMY+G +VE D+ Sbjct: 184 TTALDVTIQAQIMDLMHELQEKLGTAIILITHDLGVVASVAHRIQVMYSGIIVERGTTDD 243 Query: 242 LFGNPGHPYTQGLIRSIPRIDLDAEHKTRLEAIGGSVPILINPPPGCRFAARCKYAMSIC 301 +F NP HPYT L++S+PR LD +K L ++ G+ P L+ PP GC FAARCKY M IC Sbjct: 244 IFENPQHPYTWALLQSVPR--LDTANKGELYSLNGTPPDLLKPPAGCPFAARCKYCMGIC 301 Query: 302 TEKEPRLREIAPGHRMACHLGDA 324 E+ P +++ H ++C L D+ Sbjct: 302 KEQMPEETKLSETHSVSCWLKDS 324 >BS_oppD [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Bsu Bacillus subtilis Length = 358 Score = 355 bits (911), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 169/319 (52%), Positives = 233/319 (73%), Gaps = 2/319 (0%) Query: 3 LLDIKGLKTHFSTDDGILQAVDGVDISINRGETLCVVGESGCGKTVTAMSILKLIAMPPG 62 LL++K L F T G +QA+ GV+ +++GETL +VGESG GK+VT+ +I+KLI MPPG Sbjct: 7 LLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPG 66 Query: 63 KIVEGEIIFEGRDLVPLTSHQLDDIRAKEIGFIFQEPMTSLNPVLTIGEQIAESLHRHEA 122 GEI+FEG+DLVPL+ ++ ++R KEIG IFQ+PMTSLNP + +G+QI E L +HE Sbjct: 67 YFKRGEILFEGKDLVPLSEKEMQNVRGKEIGMIFQDPMTSLNPTMKVGKQITEVLFKHEK 126 Query: 123 VTKKQALERTIEMLKLVQIPNAAGRVHHYPHQFSGGMRQRVMIAMALACRPKLVIADEPT 182 ++K+ A +R +E+L+LV IP RV+ +PH+FSGGMRQRV+IAMALA PKL+IADEPT Sbjct: 127 ISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLIADEPT 186 Query: 183 TALDVTIQAQILDLLQDMKERFGMAVMLITHAMGVVAETAQRVVVMYAGKVVEEAPVDEL 242 TALDVTIQAQIL+L++D++++ +++ ITH +GVVA A RV VMYAG++VE VDE+ Sbjct: 187 TALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGTVDEI 246 Query: 243 FGNPGHPYTQGLIRSIPRIDLDAEHKTRLEAIGGSVPILINPPPGCRFAARCKYAMSICT 302 F +P HPYT GL+ S+P ++ E + L AI G+ P L NPP G FA R YAM I Sbjct: 247 FYDPRHPYTWGLLASMPTLESSGEEE--LTAIPGTPPDLTNPPKGDAFALRSSYAMKIDF 304 Query: 303 EKEPRLREIAPGHRMACHL 321 E+EP + +++ H + L Sbjct: 305 EQEPPMFKVSDTHYVKSWL 323