BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0118.0001.p (487 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1982 [G] COG4993 Glucose dehydrogenase Pae Pseudomonas aeruginosa 249 1e-65 SMb20173 [G] COG4993 Glucose dehydrogenase Sme Sinorhizobium mel... 230 5e-60 STM0169 [G] COG4993 Glucose dehydrogenase Sty Salmonella typhimu... 175 2e-43 Zgcd [G] COG4993 Glucose dehydrogenase EcZ Escherichia coli O157... 174 4e-43 ECs0128 [G] COG4993 Glucose dehydrogenase Ecs Escherichia coli O... 174 4e-43 >PA1982 [G] COG4993 Glucose dehydrogenase Pae Pseudomonas aeruginosa Length = 623 Score = 249 bits (635), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 172/507 (33%), Positives = 257/507 (50%), Gaps = 45/507 (8%) Query: 10 FQTDVKESLETSPIVVDGVMFVTTSFSHVYALDAKTGQQLWHYAHKMGPITVYCCGPNNR 69 F + + E+ IV DGV++VT S+S ++ALDAKTG++LW Y H++ CC NR Sbjct: 86 FGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNR 145 Query: 70 GVQVLGDRVYLATLDSKLMALNAKTGEVVWTTNIADPELGYSETMAPTVVKD----KVLI 125 G + GD+V+ TLD+ ++ALN TG+VVW AD GY+ T APT+VKD KVL+ Sbjct: 146 GAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLL 205 Query: 126 --GTNGGEYGIRGFVRAYDAKTGKQLWNFHTIPENSVGVWATKDATGRDMHRNIQAEKDM 183 G++G E+G+ G + A D TG+++W E +G KD+T + D Sbjct: 206 IHGSSGDEFGVVGRLFARDPDTGEEIW-MRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDR 264 Query: 184 LAKIG--DPYAKLGGGVWQNPSVDLATNRIYFVVGNPSP-------DLDGSNRPGDNLYT 234 + G + ++ GG WQ+ S D TN I GNP P G+ D+LYT Sbjct: 265 NSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYT 324 Query: 235 NSLVSLDLDTGKYVCHFQYIAHDVWDLDAVSPTVL--KKKXSGKTIPGVIHAGKTGHIYV 292 + V +D +G+ +Q+ +D WD + VL K GK + HA + G YV Sbjct: 325 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYV 384 Query: 293 HDRKDCSL---IRFSEAMVPQENMWVLPT-----KEGAR---------------MLPGAN 329 DR + L F + + ++ L T +EG R + P Sbjct: 385 VDRSNGKLQNAFPFVDNITWASHI-DLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFL 443 Query: 330 GGVEWSPIATDPGQELAYAINLHQPMTYHVESSAYPNGKLWLGGAFKVIPG-EKQAGNIT 388 GG W+P+A L Y H Y E +Y G +LG F++ + G++ Sbjct: 444 GGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLR 503 Query: 389 AVNYNNGKIKWQVNTPEPMIGGILATAGGLVFTGEGNGKFAAYNSSNGKELWSFRAGAGV 448 A++ +GK+ W+ P+ G+LATAG LVFTG G+G F A+++ +GKELW F+ G+G+ Sbjct: 504 AMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGI 563 Query: 449 NAPPSSYMVGGKQY--VVVGAGGNTQL 473 +PP ++ G+QY V VG GG L Sbjct: 564 VSPPITWEQDGEQYLGVTVGYGGAVPL 590 >SMb20173 [G] COG4993 Glucose dehydrogenase Sme Sinorhizobium meliloti Length = 601 Score = 230 bits (587), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 163/500 (32%), Positives = 244/500 (48%), Gaps = 35/500 (7%) Query: 1 VKDLHVAWIFQTDVKESLETSPIVVDGVMFVTTSFSH-VYALD-AKTGQQLWHYAHKMGP 58 V L VAW F T V E SP+V+ +M+V T F + VYALD +K GQ +W Y K P Sbjct: 59 VGKLQVAWTFSTGVLRGHEGSPLVIGDLMYVHTPFPNTVYALDLSKDGQIVWKYEPKQDP 118 Query: 59 --ITVYCCGPNNRGVQVLGDRVYLATLDSKLMALNAKTGEVVWTTNIADPELGYSETMAP 116 I V CC NRGV ++++L D+ ++AL+AKTG+V+W+ D G + T Sbjct: 119 NVIPVMCCDTVNRGVAYADNKIFLHQADTTVVALDAKTGKVIWSVKNGDATKGETNTATV 178 Query: 117 TVVKDKVLIGTNGGEYGIRGFVRAYDAKTGKQLWNFHTIPENSVGVWATKDATGRDMHRN 176 VKDK+L+G +GGE+G+RG V AY GK LW +++ +S + + T + + Sbjct: 179 MPVKDKILVGISGGEFGVRGHVTAYSMADGKVLWRGYSMGPDSDTLIDPEKTT--HLGKP 236 Query: 177 IQAEKDMLAKIGDPYAKLGGGVWQNPSVDLATNRIYFVVGNPSPDLDGSNRPGDNLYTNS 236 + + + GD + GG W S D N +Y+ GNPS + + RPGDN ++ + Sbjct: 237 VGKDSGLTTWEGDQWKIGGGTTWGWYSYDPEENLVYYGTGNPS-TWNPTQRPGDNRWSMT 295 Query: 237 LVSLDLDTGKYVCHFQYIAHDVWDLDAVSPTVL-KKKXSGKTIPGVIHAGKTGHIYVHDR 295 + + D+DTG +Q HD WD D V+ +L +++ GK + H + G Y DR Sbjct: 296 IFARDVDTGMAKWLYQMTPHDEWDYDGVNEMILTEQQIDGKDRKLLTHFDRNGFGYTMDR 355 Query: 296 KDCSLIRFSE-----------AMVPQENMWVLP-------TKEGAR------MLPGANGG 331 L+ + M P+ + + P T++ + P A G Sbjct: 356 VTGELLVAEKYDPTVNWATEVVMDPKSDKYGRPQVVAQYSTEQNGEDTNTTGVCPAALGT 415 Query: 332 VEWSPIATDPGQELAYAINLHQPMTYHVESSAYPNGKLWLGGAFKVIPGEKQ---AGNIT 388 + P A P EL Y H M Y +Y G+ ++G + P + GN Sbjct: 416 KDQQPAAYSPKTELFYVPTNHVCMDYEPFRVSYTAGQPYVGATLSMYPPKDSHGGMGNFI 475 Query: 389 AVNYNNGKIKWQVNTPEPMIGGILATAGGLVFTGEGNGKFAAYNSSNGKELWSFRAGAGV 448 A + GKIKW + P + G LATAG +VF G G A +++ GKEL+ F+ +GV Sbjct: 476 AWDNKEGKIKWSLPEPFSVWSGALATAGDVVFYGTLEGYLKAVDAATGKELYRFKTPSGV 535 Query: 449 NAPPSSYMVGGKQYVVVGAG 468 +Y GKQYV V +G Sbjct: 536 IGNVMTYAREGKQYVAVLSG 555 >STM0169 [G] COG4993 Glucose dehydrogenase Sty Salmonella typhimurium LT2 Length = 796 Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 165/627 (26%), Positives = 265/627 (42%), Gaps = 167/627 (26%) Query: 1 VKDLHVAWIFQT-DVKE-------SLETSPIVVDGVMFVTTSFSHVYALDAKTGQQLWHY 52 V L AW+F+T D+K+ + E +PI V +++ T+ ++ALDA +G++ WH+ Sbjct: 191 VHQLKEAWVFRTGDLKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFALDAASGKEKWHF 250 Query: 53 AHKMGPIT----VYCCG-------PNNRGVQVLGD---RVYLATLDSKLMALNAKTGEVV 98 ++ + V C G + +V+ D R+ L D +L A+NA+TG++ Sbjct: 251 DPQLKTDSSFQHVTCRGVSYHEAKADTASPEVIADCPRRIILPVNDGRLFAVNAETGKLC 310 Query: 99 WT----------TNIADPELGYSETMAPTVVKDK--VLIGTNGGEYGIR---GFVRAYDA 143 T TN+ D G E +P ++ DK V+ G+ + R G +R +D Sbjct: 311 ETFANKGVLNLQTNMPDTTPGLYEPTSPPIITDKTIVIAGSVTDNFSTRETSGVIRGFDV 370 Query: 144 KTGKQLWNFHTIPENSVGVWATKDATGRDMHRNIQAEKDMLAKIGDPYAKLGGGVWQNPS 203 +GK +W F D +D + I A++ P + W + Sbjct: 371 NSGKLMWAF--------------DPGAKDPNA-IPADEHAFT-FNSPNS------WAPAA 408 Query: 204 VDLATNRIYFVVGNPSPDLDGSNR-PGDNLYTNSLVSLDLDTGKYVCHFQYIAHDVWDLD 262 D + +Y +G +PD+ G NR P Y +S+++L+ TGK +Q + HD+WD+D Sbjct: 409 YDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMD 468 Query: 263 -AVSPTVLKKKXSGKTIPGVIHAGKTGHIYVHDRKDCSLI-RFSEAMVPQ---------- 310 PT+ G T+P + KTG+I+V DR++ L+ E VPQ Sbjct: 469 LPAQPTLADITVDGTTVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVAK 528 Query: 311 ----------------------------------------ENMWVLPTKEGARMLPGANG 330 E ++ P+++G + PG G Sbjct: 529 TQPFSDLTFRPKKDLSGADMWGATMFDQLVCRVMFHQLRYEGIFTPPSEQGTLVFPGNLG 588 Query: 331 GVEWSPIATDPGQELAYAINLHQPMTYHVESSAYPNG--------------------KLW 370 EW I+ DP +++A A PM S P G + Sbjct: 589 MFEWGGISVDPDRQVAIA----NPMALPFVSKLIPRGPGNPMEPPKDAKGTGTEAGIQPQ 644 Query: 371 LGGAFKV----------IPGEKQA-GNITAVNYNNGKIKW--QVNTPE------------ 405 G F V +P ++ A G I+A++ +I W ++ TP Sbjct: 645 YGVPFGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEIVWKKRIGTPRDSMPFPMPVPVP 704 Query: 406 -----PMIGGILATAGGLVF-TGEGNGKFAAYNSSNGKELWSFRAGAGVNAPPSSYMVGG 459 PM+GG ++TAG ++F + AYN SNG++LW R AG A P +Y V G Sbjct: 705 FNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNG 764 Query: 460 KQYVVVGAGGNTQLDYKRGNNIIAFTL 486 KQYVVV AGG+ K G+ I+A+ L Sbjct: 765 KQYVVVSAGGHGSFGTKMGDYIVAYAL 791 >Zgcd [G] COG4993 Glucose dehydrogenase EcZ Escherichia coli O157:H7 EDL933 Length = 796 Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 160/623 (25%), Positives = 263/623 (42%), Gaps = 159/623 (25%) Query: 1 VKDLHVAWIFQT-DVKE-------SLETSPIVVDGVMFVTTSFSHVYALDAKTGQQLWHY 52 V +L AW+F+T DVK+ + E +PI V +++ T+ ++ALDA +G++ WHY Sbjct: 191 VHNLKEAWVFRTGDVKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFALDAASGKEKWHY 250 Query: 53 AHKMGPIT----VYCCG-------PNNRGVQVLGD---RVYLATLDSKLMALNAKTGEVV 98 ++ V C G +V+ D R+ L D +L+A+NA+ G++ Sbjct: 251 DPELKTNESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILPVNDGRLIAINAENGKLC 310 Query: 99 WT----------TNIADPELGYSETMAPTVVKDK--VLIGTNGGEYGIR---GFVRAYDA 143 T +N+ D + G E +P ++ DK V+ G+ + R G +R +D Sbjct: 311 ETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDV 370 Query: 144 KTGKQLWNFHTIPENSVGVWATKDATGRDMHRNIQAEKDMLAKIGDPYAKLGGGVWQNPS 203 TG+ LW F D +D N + P + W + Sbjct: 371 NTGELLWAF--------------DPGAKD--PNAIPSDEHTFTFNSPNS------WAPAA 408 Query: 204 VDLATNRIYFVVGNPSPDLDGSNR-PGDNLYTNSLVSLDLDTGKYVCHFQYIAHDVWDLD 262 D + +Y +G +PD+ G NR P Y +S+++L+ TGK +Q + HD+WD+D Sbjct: 409 YDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMD 468 Query: 263 -AVSPTVLKKKXSGKTIPGVIHAGKTGHIYVHDRKDCSLI-RFSEAMVPQ---------- 310 PT+ +G+ +P + KTG+I+V DR++ L+ E VPQ Sbjct: 469 LPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTP 528 Query: 311 ----------------------------------------ENMWVLPTKEGARMLPGANG 330 E ++ P+++G + PG G Sbjct: 529 TQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLG 588 Query: 331 GVEWSPIATDPGQELAYAINLHQPMTYHV--------------------ESSAYPNGKLW 370 EW I+ DP +E+A A + P + ES P + Sbjct: 589 MFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVP 648 Query: 371 LGGAFKV------IPGEKQA-GNITAVNYNNGKIKW--QVNTPE---------------- 405 G +P ++ A G I+A++ ++ W ++ TP+ Sbjct: 649 YGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEVVWKKRIGTPQDSMPFPMPVPVPFNMG 708 Query: 406 -PMIGGILATAGGLVF-TGEGNGKFAAYNSSNGKELWSFRAGAGVNAPPSSYMVGGKQYV 463 PM+GG ++TAG ++F + AYN SNG++LW R AG A P +Y V GKQYV Sbjct: 709 MPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYV 768 Query: 464 VVGAGGNTQLDYKRGNNIIAFTL 486 V+ AGG+ K G+ I+A+ L Sbjct: 769 VISAGGHGSFGTKMGDYIVAYAL 791 >ECs0128 [G] COG4993 Glucose dehydrogenase Ecs Escherichia coli O157:H7 Length = 796 Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 160/623 (25%), Positives = 263/623 (42%), Gaps = 159/623 (25%) Query: 1 VKDLHVAWIFQT-DVKE-------SLETSPIVVDGVMFVTTSFSHVYALDAKTGQQLWHY 52 V +L AW+F+T DVK+ + E +PI V +++ T+ ++ALDA +G++ WHY Sbjct: 191 VHNLKEAWVFRTGDVKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFALDAASGKEKWHY 250 Query: 53 AHKMGPIT----VYCCG-------PNNRGVQVLGD---RVYLATLDSKLMALNAKTGEVV 98 ++ V C G +V+ D R+ L D +L+A+NA+ G++ Sbjct: 251 DPELKTNESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILPVNDGRLIAINAENGKLC 310 Query: 99 WT----------TNIADPELGYSETMAPTVVKDK--VLIGTNGGEYGIR---GFVRAYDA 143 T +N+ D + G E +P ++ DK V+ G+ + R G +R +D Sbjct: 311 ETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDV 370 Query: 144 KTGKQLWNFHTIPENSVGVWATKDATGRDMHRNIQAEKDMLAKIGDPYAKLGGGVWQNPS 203 TG+ LW F D +D N + P + W + Sbjct: 371 NTGELLWAF--------------DPGAKD--PNAIPSDEHTFTFNSPNS------WAPAA 408 Query: 204 VDLATNRIYFVVGNPSPDLDGSNR-PGDNLYTNSLVSLDLDTGKYVCHFQYIAHDVWDLD 262 D + +Y +G +PD+ G NR P Y +S+++L+ TGK +Q + HD+WD+D Sbjct: 409 YDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMD 468 Query: 263 -AVSPTVLKKKXSGKTIPGVIHAGKTGHIYVHDRKDCSLI-RFSEAMVPQ---------- 310 PT+ +G+ +P + KTG+I+V DR++ L+ E VPQ Sbjct: 469 LPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTP 528 Query: 311 ----------------------------------------ENMWVLPTKEGARMLPGANG 330 E ++ P+++G + PG G Sbjct: 529 TQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLG 588 Query: 331 GVEWSPIATDPGQELAYAINLHQPMTYHV--------------------ESSAYPNGKLW 370 EW I+ DP +E+A A + P + ES P + Sbjct: 589 MFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVP 648 Query: 371 LGGAFKV------IPGEKQA-GNITAVNYNNGKIKW--QVNTPE---------------- 405 G +P ++ A G I+A++ ++ W ++ TP+ Sbjct: 649 YGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEVVWKKRIGTPQDSMPFPMPVPVPFNMG 708 Query: 406 -PMIGGILATAGGLVF-TGEGNGKFAAYNSSNGKELWSFRAGAGVNAPPSSYMVGGKQYV 463 PM+GG ++TAG ++F + AYN SNG++LW R AG A P +Y V GKQYV Sbjct: 709 MPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYV 768 Query: 464 VVGAGGNTQLDYKRGNNIIAFTL 486 V+ AGG+ K G+ I+A+ L Sbjct: 769 VISAGGHGSFGTKMGDYIVAYAL 791