BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0117.0038.p         (125 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC0591 [T] COG0784 FOG Ccr Caulobacter vibrioides                     172   1e-43
YPO1680 [T] COG0784 FOG Ype Yersinia pestis                           148   4e-36
cheY [T] COG0784 FOG Eco Escherichia coli K12                         147   5e-36
ZcheY [T] COG0784 FOG EcZ Escherichia coli O157:H7 EDL933             147   5e-36
ECs2592 [T] COG0784 FOG Ecs Escherichia coli O157:H7                  147   5e-36

>CC0591 [T] COG0784 FOG Ccr Caulobacter vibrioides
          Length = 127

 Score =  172 bits (437), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/122 (65%), Positives = 96/122 (78%)

Query: 1   MPVLVVDDYSTMIRIIRNLLKQLGFENIDDASDGSAALNKMRGKKYGLVISDWNMEPMTG 60
           MP+LVVDDY T I+I+  LL+QLGF N+D+A +G  AL K+R + Y LVISDWNMEPMTG
Sbjct: 6   MPILVVDDYKTTIKIVHGLLRQLGFTNLDEAENGEEALRKLRTQSYQLVISDWNMEPMTG 65

Query: 61  YDLLKEVRADPNLATTPFIMITAESKTENVIAAKKAGVNNYIVKPFNAATLKTKIEAVFP 120
            +LL+ VRAD  L  TPFIMITAESK ENV+AAK+AG NNYIVKPF+A  LK KI ++F 
Sbjct: 66  IELLRSVRADSALRATPFIMITAESKVENVVAAKQAGANNYIVKPFSAEALKQKIVSIFG 125

Query: 121 DM 122
           D 
Sbjct: 126 DF 127


>YPO1680 [T] COG0784 FOG Ype Yersinia pestis
          Length = 129

 Score =  148 bits (373), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 68/123 (55%), Positives = 90/123 (73%)

Query: 1   MPVLVVDDYSTMIRIIRNLLKQLGFENIDDASDGSAALNKMRGKKYGLVISDWNMEPMTG 60
           +  LVVDD+STM RI+RNLLK+LGF N+++A DG  ALNK+R   +  V+SDWNM  M G
Sbjct: 6   LRFLVVDDFSTMRRIVRNLLKELGFHNVEEAEDGVDALNKLRAGGFDFVVSDWNMPNMDG 65

Query: 61  YDLLKEVRADPNLATTPFIMITAESKTENVIAAKKAGVNNYIVKPFNAATLKTKIEAVFP 120
            DLLK +R D  LAT P +M+TAE+K EN+IAA +AG + Y+VKPF AATL+ K+  +F 
Sbjct: 66  LDLLKTIRTDGALATLPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 125

Query: 121 DMA 123
            + 
Sbjct: 126 KLG 128


>cheY [T] COG0784 FOG Eco Escherichia coli K12
          Length = 129

 Score =  147 bits (371), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 91/123 (73%)

Query: 1   MPVLVVDDYSTMIRIIRNLLKQLGFENIDDASDGSAALNKMRGKKYGLVISDWNMEPMTG 60
           +  LVVDD+STM RI+RNLLK+LGF N+++A DG  ALNK++   YG VISDWNM  M G
Sbjct: 6   LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDG 65

Query: 61  YDLLKEVRADPNLATTPFIMITAESKTENVIAAKKAGVNNYIVKPFNAATLKTKIEAVFP 120
            +LLK +RAD  ++  P +M+TAE+K EN+IAA +AG + Y+VKPF AATL+ K+  +F 
Sbjct: 66  LELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 125

Query: 121 DMA 123
            + 
Sbjct: 126 KLG 128


>ZcheY [T] COG0784 FOG EcZ Escherichia coli O157:H7 EDL933
          Length = 129

 Score =  147 bits (371), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 91/123 (73%)

Query: 1   MPVLVVDDYSTMIRIIRNLLKQLGFENIDDASDGSAALNKMRGKKYGLVISDWNMEPMTG 60
           +  LVVDD+STM RI+RNLLK+LGF N+++A DG  ALNK++   YG VISDWNM  M G
Sbjct: 6   LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDG 65

Query: 61  YDLLKEVRADPNLATTPFIMITAESKTENVIAAKKAGVNNYIVKPFNAATLKTKIEAVFP 120
            +LLK +RAD  ++  P +M+TAE+K EN+IAA +AG + Y+VKPF AATL+ K+  +F 
Sbjct: 66  LELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 125

Query: 121 DMA 123
            + 
Sbjct: 126 KLG 128


>ECs2592 [T] COG0784 FOG Ecs Escherichia coli O157:H7
          Length = 129

 Score =  147 bits (371), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 67/123 (54%), Positives = 91/123 (73%)

Query: 1   MPVLVVDDYSTMIRIIRNLLKQLGFENIDDASDGSAALNKMRGKKYGLVISDWNMEPMTG 60
           +  LVVDD+STM RI+RNLLK+LGF N+++A DG  ALNK++   YG VISDWNM  M G
Sbjct: 6   LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDG 65

Query: 61  YDLLKEVRADPNLATTPFIMITAESKTENVIAAKKAGVNNYIVKPFNAATLKTKIEAVFP 120
            +LLK +RAD  ++  P +M+TAE+K EN+IAA +AG + Y+VKPF AATL+ K+  +F 
Sbjct: 66  LELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 125

Query: 121 DMA 123
            + 
Sbjct: 126 KLG 128