BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0117.0036.p (323 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII1044 [H] COG0196 FAD synthase Bme Brucella melitensis 270 4e-72 AGc1228 [H] COG0196 FAD synthase Atu Agrobacterium tumefaciens s... 268 2e-71 mlr8243 [H] COG0196 FAD synthase Mlo Mesorhizobium loti 261 1e-69 SMc00909 [H] COG0196 FAD synthase Sme Sinorhizobium meliloti 258 1e-68 PA4561 [H] COG0196 FAD synthase Pae Pseudomonas aeruginosa 202 8e-52 >BMEII1044 [H] COG0196 FAD synthase Bme Brucella melitensis Length = 329 Score = 270 bits (690), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 147/293 (50%), Positives = 185/293 (63%), Gaps = 3/293 (1%) Query: 21 AVVAMGNFDGVHLGHRAVIGAALAMGRAHGVPALAVTFEPHPRSFFSPNTPQFRLTDETN 80 VVA+GNFDGVH GH+AV+ AL + PA+ +TFEPHPRSFF + P RLTD Sbjct: 22 CVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRSFFKQDQPVDRLTDAAE 81 Query: 81 KLRLLAATGLAGAVVMTFDKARAGTSAQDFIHHDLIGRLGISGIAVGYDFHFGKGRVGSP 140 K +L G + F + SA+DF+ H L+ +L S + GYDFHFGKGR G+P Sbjct: 82 KAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRVVTGYDFHFGKGRRGTP 141 Query: 141 SLLVSEAPRLGIEVD-VQAHVDIEERPVSSSAIRMALAEGEIADATTMLGGPWFVTGKVI 199 L + G V V A D VSS+ IR L+EGE+A+A +LG + + G+VI Sbjct: 142 EFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAEAAGLLGYRYRICGEVI 201 Query: 200 HGEKRGRDLGYPTANIRLDKHCGLKHGIYAVRVG-KGSQRFDGVASFGRRPTFDN-GAPL 257 HG+K GR LG+PTAN+ L LKHGIYAVR + +DGVASFGRRPT D+ GAPL Sbjct: 202 HGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGVASFGRRPTVDDEGAPL 261 Query: 258 LEAFLFDFKGDLYDAVLDVAFIGFIREELKFDTIEALIRQMDDDSAKARAVLA 310 LE FLFDF GDLY V+F GF+R E+KFD ++ LI QM D A+ARA+LA Sbjct: 262 LETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQDEAQARALLA 314 >AGc1228 [H] COG0196 FAD synthase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 326 Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 155/312 (49%), Positives = 195/312 (62%), Gaps = 8/312 (2%) Query: 6 TVIRDNTPASAIP---KGAVVAMGNFDGVHLGHRAVIGAALAMGRAHGVPALAVTFEPHP 62 TV N +P +G V+A+GNFDGVH GHRAV+ AL + A GVPAL +TFEPHP Sbjct: 2 TVFHRNEKKEPLPEALRGGVIAIGNFDGVHRGHRAVLDRALELAEARGVPALVLTFEPHP 61 Query: 63 RSFFSPNTPQFRLTDETNKLRLLAATGLAGAVVMTFDKARAGTSAQDFIHHDLIGRLGIS 122 RS F P+TP FRLT K R+L A G + FD+ + SA +F+ L+ LG S Sbjct: 62 RSVFRPDTPVFRLTPAPLKARILEAIGFRSVIEYPFDREFSQRSADEFVQSILVDWLGAS 121 Query: 123 GIAVGYDFHFGKGRVGSPSLLVSEAPRLGIEVD-VQAHVDIEERPVSSSAIRMALAEGEI 181 + G+DFHFGKGR G P+ L++ R G +V V A D VSSS IR L EG++ Sbjct: 122 AVVTGFDFHFGKGREGGPAFLMAAGKRHGFDVTLVDAFRDEGSDVVSSSRIRSLLCEGDV 181 Query: 182 ADATTMLGGPWFVTGKVIHGEKRGRDLGYPTANIRLDKHCGLKHGIYAVRVGK--GSQRF 239 A A +LG + V +VI G+K GR LGYPTAN+ L LK GIYAVR + GS Sbjct: 182 AGAAGLLGYRFTVESEVIGGQKLGRTLGYPTANMALAPETELKAGIYAVRFRRLDGSIH- 240 Query: 240 DGVASFGRRPTF-DNGAPLLEAFLFDFKGDLYDAVLDVAFIGFIREELKFDTIEALIRQM 298 DGVASFG RPT +NGA LLE FLFDF GDLY V V+F G +R+ELKFD ++ L+ Q+ Sbjct: 241 DGVASFGYRPTVTENGAALLETFLFDFSGDLYGEVCSVSFFGHLRDELKFDGLDPLVAQI 300 Query: 299 DDDSAKARAVLA 310 D +ARA+L+ Sbjct: 301 RRDEEEARAMLS 312 >mlr8243 [H] COG0196 FAD synthase Mlo Mesorhizobium loti Length = 326 Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 152/311 (48%), Positives = 191/311 (61%), Gaps = 3/311 (0%) Query: 3 TGFTVIRDNTPASAIPKGAVVAMGNFDGVHLGHRAVIGAALAMGRAHGVPALAVTFEPHP 62 GF + P A +G VVA+GNFDGVH GH+AV+ ALA VPAL ++FEPHP Sbjct: 2 VGFQHLSATAPLPADLRGGVVAIGNFDGVHRGHQAVLERALAEAVQRDVPALVLSFEPHP 61 Query: 63 RSFFSPNTPQFRLTDETNKLRLLAATGLAGAVVMTFDKARAGTSAQDFIHHDLIGRLGIS 122 R F P+ P F LT K RLL+ G A V F + A SA+ F+ L LGI+ Sbjct: 62 RKVFRPDIPLFVLTPPPMKARLLSLLGFAALVEQPFTRDFAALSAEAFVTDVLERTLGIT 121 Query: 123 GIAVGYDFHFGKGRVGSPSLLVSEAPRLGIEVD-VQAHVDIEERPVSSSAIRMALAEGEI 181 G+DFHFGK R G P+ L++ R G V V A D VSSS IR L +GE+ Sbjct: 122 HAVTGFDFHFGKDRQGGPAYLMAAGERHGFGVTLVDAFRDEGAEVVSSSRIRALLCDGEV 181 Query: 182 ADATTMLGGPWFVTGKVIHGEKRGRDLGYPTANIRLDKHCGLKHGIYAVRVGKGSQRF-D 240 A+A +LG + V +V+ G++ GR LG+PTAN+RL LK GIYAVR + D Sbjct: 182 AEAAGLLGYRFTVESEVVGGQQLGRTLGFPTANMRLPAEATLKEGIYAVRFRRADGTLHD 241 Query: 241 GVASFGRRPTF-DNGAPLLEAFLFDFKGDLYDAVLDVAFIGFIREELKFDTIEALIRQMD 299 GVASFGRRPT DNGAPLLE F+FDF GDLY +V+F GF+R E+KFD ++AL+ QM Sbjct: 242 GVASFGRRPTVDDNGAPLLETFVFDFSGDLYGETSEVSFFGFLRSEIKFDGLDALVVQMK 301 Query: 300 DDSAKARAVLA 310 D A+ARA+LA Sbjct: 302 RDEAEARALLA 312 >SMc00909 [H] COG0196 FAD synthase Sme Sinorhizobium meliloti Length = 327 Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 149/311 (47%), Positives = 189/311 (60%), Gaps = 6/311 (1%) Query: 6 TVIRDNTPASAIP---KGAVVAMGNFDGVHLGHRAVIGAALAMGRAHGVPALAVTFEPHP 62 TV N +P +G VVA+GNFDGVH GH++V+ AL VPAL +TFEPHP Sbjct: 2 TVFHRNETRDPLPEHLRGGVVAIGNFDGVHRGHQSVLNRALEEAVKRAVPALVLTFEPHP 61 Query: 63 RSFFSPNTPQFRLTDETNKLRLLAATGLAGAVVMTFDKARAGTSAQDFIHHDLIGRLGIS 122 R+ F P+TP FRLT K R+L G + FD++ + SA DFIH L L S Sbjct: 62 RTVFRPDTPVFRLTPAPLKARILEGMGFGAVIEYPFDRSFSELSASDFIHSILREWLHAS 121 Query: 123 GIAVGYDFHFGKGRVGSPSLLVSEAPRLGIEVD-VQAHVDIEERPVSSSAIRMALAEGEI 181 + G+DFHFGKGR G P+ L++ R G V V A D +SSS IR LA+G++ Sbjct: 122 HVVTGFDFHFGKGREGGPAFLMAAGEREGFGVTLVDAFRDENAAVISSSFIRSLLADGDV 181 Query: 182 ADATTMLGGPWFVTGKVIHGEKRGRDLGYPTANIRLDKHCGLKHGIYAVRVGKGSQRF-D 240 A +LG + V +VI G+K GR LGYPTAN+RL LK GIYAVR + D Sbjct: 182 PHAAGLLGYRYTVEAEVIDGKKLGRTLGYPTANMRLPPEAELKSGIYAVRFRRADGSLHD 241 Query: 241 GVASFGRRPTFD-NGAPLLEAFLFDFKGDLYDAVLDVAFIGFIREELKFDTIEALIRQMD 299 GVASFGRRPT D +G LLE F+FDF DLY + V+F G +R+ELKFD +E L+ QM Sbjct: 242 GVASFGRRPTVDSDGEALLETFVFDFSADLYGEICAVSFFGRLRDELKFDGLEPLMVQMR 301 Query: 300 DDSAKARAVLA 310 D ++ARA+LA Sbjct: 302 KDESEARALLA 312 >PA4561 [H] COG0196 FAD synthase Pae Pseudomonas aeruginosa Length = 312 Score = 202 bits (514), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 112/276 (40%), Positives = 160/276 (57%), Gaps = 1/276 (0%) Query: 20 GAVVAMGNFDGVHLGHRAVIGAALAMGRAHGVPALAVTFEPHPRSFFSPNTPQFRLTDET 79 G V +GNFDGVHLGH+A++ GVP+ V FEP PR FFSP++ RLT Sbjct: 16 GCVATIGNFDGVHLGHQAILARLRERSLELGVPSCVVIFEPQPREFFSPDSAPVRLTRLR 75 Query: 80 NKLRLLAATGLAGAVVMTFDKARAGTSAQDFIHHDLIGRLGISGIAVGYDFHFGKGRVGS 139 KL LL G+ + + F++ SA +F+ L+ L + + VG DF FG R G Sbjct: 76 EKLELLRGQGVDVVLCLAFNRRLRELSAAEFVRQVLVDGLAVRHLEVGDDFRFGCDRSGD 135 Query: 140 PSLLVSEAPRLGIEVDVQAHVDIEERPVSSSAIRMALAEGEIADATTMLGGPWFVTGKVI 199 + LV+ + G V+ V+++ VSS+ +R ALAEG++ A +LG P+ ++G+V+ Sbjct: 136 FAFLVNASREQGFTVEAATTVELDGVRVSSTRVRQALAEGDLHLAERLLGRPFSLSGRVL 195 Query: 200 HGEKRGRDLGYPTANIRLDKHCGLKHGIYAVRVGKGSQRFDGVASFGRRPTFD-NGAPLL 258 HG+K GR LG PTANI+L + +G+Y V QR GVA+ G RP+ + +G P L Sbjct: 196 HGQKLGRQLGSPTANIQLKRRKAPLNGVYLVSTLVDGQRCQGVANIGTRPSVNGDGRPHL 255 Query: 259 EAFLFDFKGDLYDAVLDVAFIGFIREELKFDTIEAL 294 E L DF GDLY L V F +R+E +F ++EAL Sbjct: 256 EVHLLDFAGDLYGRHLQVTFHQKLRDEQRFASLEAL 291