BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0117.0028.p         (67 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEI2038 [J] COG1186 Protein chain release factor B Bme Brucella...    73   2e-13

>BMEI2038 [J] COG1186 Protein chain release factor B Bme Brucella
          melitensis
          Length = 145

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/56 (58%), Positives = 42/56 (75%)

Query: 5  MLRVSRDLTIDENDIEIVFVRASGPGGQNVNKVSTAAQLRFDTNKIALPADAAQRL 60
          ++R++R L+I E+D+E  F+RASGPGGQNVNKVSTA QLRF   +  LP D   RL
Sbjct: 7  IIRITRRLSIHEDDLEEAFIRASGPGGQNVNKVSTAVQLRFHAARSGLPEDILSRL 62