BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0155.p (458 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0704 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 164 5e-40 BMEII0289 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A... 122 1e-27 AGl854 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 115 3e-25 mlr6081 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s... 108 2e-23 mlr0229 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s... 86 3e-16 >PA0704 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Pae Pseudomonas aeruginosa Length = 464 Score = 164 bits (415), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 157/474 (33%), Positives = 211/474 (44%), Gaps = 54/474 (11%) Query: 14 LTEAYASRALSPVEVLQTVLGHAEAVNPAINALFCFRPEQAMATAQGSEARWKAGAALGP 73 L +A R LSP E + +L H + P +NAL+ F P++ A + RW+ G GP Sbjct: 12 LLALFARRELSPGEYYEHLLAHIQRWEPHLNALYRFDPQRVREQAAAATERWRKGQPKGP 71 Query: 74 LDGVPMTVKDSVAMIGWPYFHGIGANRALPPSNYDSPPTIALREAGAVIFAKTTMPDCGL 133 LDG+P+T+K+ +A G P G A AL P+ D+PP LREAGA++ AKTT+PD G+ Sbjct: 72 LDGLPVTIKELIATAGEPIPLGSAAT-ALQPAPCDAPPAARLREAGAIVLAKTTVPDFGM 130 Query: 134 MASGISSLHGVTRNPWGLAWNTGGSS-----------------AGAGAFVAAGAGYVFRR 176 ++SG+SS HGVTRNPW LA NTGGSS G V AG+ Sbjct: 131 LSSGLSSFHGVTRNPWNLANNTGGSSSGAAAAATAGYGPLHLGTDIGGSVRLPAGWC--- 187 Query: 177 HGYRGLGPPSGR----PLRTGRTEADPWPCAAFAGRHHAHGRPDGPQRGRYRAPPDRADA 232 G G P GR P TGR CA R D RY A PD DA Sbjct: 188 -GLVGFKPSLGRIPIDPYYTGR-------CAGPMTRCMD----DCLLLMRYLAQPDARDA 235 Query: 233 AGRARHLEP-ARRWRALSRASEARREGTE-----DRRPHRHGLRHEGGGGGSLRGRSGRQ 286 L P W A + R G + +P + Sbjct: 236 TS----LPPEVLDWSAEPLSVRGLRVGLQLDPGCGLQPDAEIRAAIEAAARLFEEHGAQL 291 Query: 287 AARXPLTDDAYAP-IDLFLQVRGYLEYASLPPHGDTAR-DINPYVRAWCLGGAKHSGADL 344 PL D + ++ F + R + E L +T R + PYV AW GGA+ SG D Sbjct: 292 RIVEPLMDRSLLDGLNDFWRARLWSELLLL---DETRRARVLPYVHAWAEGGARVSGVDA 348 Query: 345 YRALGQIAKMKAALLAAFEGWDYVIAPTLPVVNFPAE--EPGVSREMPLAHTLFTAMFNQ 402 R Q +M+ F D ++ PT V FPA+ P + P H +FT +N Sbjct: 349 VRGFNQTFEMRRRAARLFGEIDLLLTPTNQVEAFPADWASPLNDPQRPFEHIVFTVPWNM 408 Query: 403 TCQPASTVCMAFDSRHLPIGVQVTGHRFDDLGVLQVTKALEDMRTVAMDWPFKP 456 QPA ++ F + +PIG+Q+ RF D +L++ K E R WP P Sbjct: 409 GEQPALSINCGFTAAGMPIGLQLVAPRFADTWLLRIGKTYEGWRGPIHGWPRPP 462 >BMEII0289 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Bme Brucella melitensis Length = 462 Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 68/151 (45%), Positives = 93/151 (61%), Gaps = 1/151 (0%) Query: 4 AELIGMSLAGLTEAYASRALSPVEVLQTVLGHAEAVNPAINALFCFRPEQAMATAQGSEA 63 + L +S L +Y ++ALSPVEV + V+G EA P +NAL+ + PE A A+ SEA Sbjct: 2 SHLADLSAVELVSSYKAKALSPVEVTEAVIGRIEAYEPKLNALWAYDPEAARLAAKASEA 61 Query: 64 RWKAGAALGPLDGVPMTVKDSVAMIGWPYFHGIGANRALPPSNYDSPPTIALREAGAVIF 123 RW G GP+DGVP+T+K+++A G P G A P + P REAG V+ Sbjct: 62 RWAKGEPAGPIDGVPLTIKENIATKGTPVPLGCAALPLKPAAADAPP-AARTREAGGVLL 120 Query: 124 AKTTMPDCGLMASGISSLHGVTRNPWGLAWN 154 AKTTMPD G+++SG+SS H + RNPW +A N Sbjct: 121 AKTTMPDLGMLSSGLSSFHKLARNPWDIATN 151 Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 4/156 (2%) Query: 300 IDLFLQVRGYLEYASLPPHGDTARDINPYVRAWCLGGAKHSGADLYRALGQIAKMKAALL 359 +D F + R + + + P I PY+ W SG + Y Q+ M+ A L Sbjct: 306 LDRFWRARSWSDIKKMTPENQA--KILPYIYQWTETAEGLSGEEAYLGFAQMDAMRNAAL 363 Query: 360 AAFEGWDYVIAPTLPVVNFPAE--EPGVSREMPLAHTLFTAMFNQTCQPASTVCMAFDSR 417 AA + +D++I+PT P+ +PAE P + P H FT N + QPA ++ + ++ Sbjct: 364 AASKDFDFIISPTAPMPTYPAEWASPINDPQRPFEHIAFTVAMNMSEQPAISINCGYTAK 423 Query: 418 HLPIGVQVTGHRFDDLGVLQVTKALEDMRTVAMDWP 453 LPIG+Q+ G RFDDLGVL++ KA EDMR V WP Sbjct: 424 GLPIGLQIFGQRFDDLGVLRLAKAYEDMRPVQRPWP 459 >AGl854 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 465 Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 86/145 (59%), Gaps = 1/145 (0%) Query: 5 ELIGMSLAGLTEAYASRALSPVEVLQTVLGHAEAVNPAINALFCFRPEQAMATAQGSEAR 64 +LI ++ + Y + LSP E Q V EA P +NAL+ + PE A A S R Sbjct: 3 DLIDLNTLEILALYREKKLSPSEYWQAVETRIEAFEPVVNALYAYDPEDARRQAAASTQR 62 Query: 65 WKAGAALGPLDGVPMTVKDSVAMIGWPYFHGIGANRALPPSNYDSPPTIALREAGAVIFA 124 W+ G LGPLDG+P+++K+ +A G P G A L P+ D+P RE GA+++A Sbjct: 63 WQRGETLGPLDGLPVSLKELIATKGHPVPLGTKAVE-LVPALEDAPVAARCREDGAILYA 121 Query: 125 KTTMPDCGLMASGISSLHGVTRNPW 149 KTT PD G+++SG+SS H ++RNPW Sbjct: 122 KTTCPDYGMLSSGLSSFHKLSRNPW 146 Score = 84.3 bits (207), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 4/168 (2%) Query: 292 LTDDAYAPIDLFLQVRGYLEYASLPPHGDTARDINPYVRAWCLGGAKHSGADLYRALGQI 351 LT D +D F + + + + +L D I PY+ W GA SGA Q Sbjct: 298 LTRDMLDGLDDFWRAKFWGDMVAL--SADRRAAILPYILEWAEKGANVSGARAVFGFNQT 355 Query: 352 AKMKAALLAAFEGWDYVIAPTLPVVNFPAE--EPGVSREMPLAHTLFTAMFNQTCQPAST 409 +M+ A + D VI+P P+ ++PA+ P P H FT +N + QPAS+ Sbjct: 356 MEMRKACGRLMQSVDAVISPVNPIASYPADWASPTNDPARPFEHIAFTVPWNMSEQPASS 415 Query: 410 VCMAFDSRHLPIGVQVTGHRFDDLGVLQVTKALEDMRTVAMDWPFKPR 457 + F +PIG+Q+ G R++DL VL+++KA E+ WP P Sbjct: 416 INCGFSKSGMPIGLQIIGPRYEDLFVLRLSKAFENWGGGVRRWPEPPN 463 >mlr6081 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Mlo Mesorhizobium loti Length = 478 Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 64/155 (41%), Positives = 83/155 (53%), Gaps = 5/155 (3%) Query: 1 MSAAELIGMSLAGLT-----EAYASRALSPVEVLQTVLGHAEAVNPAINALFCFRPEQAM 55 M + + SL GLT + Y R LSPVEV+ L +A NP +NA ++A Sbjct: 1 MKSRSSVPTSLEGLTACECLKLYQRRQLSPVEVVDDCLSRIDANNPMLNAFCLVDHQRAR 60 Query: 56 ATAQGSEARWKAGAALGPLDGVPMTVKDSVAMIGWPYFHGIGANRALPPSNYDSPPTIAL 115 + A+ SE RW G G LDGVP+T+KD WP G ++ A P D+P T + Sbjct: 61 SAARASEGRWMKGEPAGVLDGVPVTIKDLTLTRDWPTRRGSLSSSAEGPWTDDAPVTARI 120 Query: 116 REAGAVIFAKTTMPDCGLMASGISSLHGVTRNPWG 150 REAGAVI KTT P+ G S L+G+TRNPW Sbjct: 121 REAGAVILGKTTTPEFGWKGVTDSPLYGITRNPWN 155 Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 3/91 (3%) Query: 356 AALLAAF-EGWDYVIAPTLPVVNFPA--EEPGVSREMPLAHTLFTAMFNQTCQPASTVCM 412 +AL+A F E +D+++ PT+P+ FP EP S + T FT FN T QPA+++ Sbjct: 368 SALMAKFHEDYDFLVTPTMPIAPFPVGRNEPDDSFTGWVDWTPFTYPFNLTQQPAASLPS 427 Query: 413 AFDSRHLPIGVQVTGHRFDDLGVLQVTKALE 443 D + LP+G+Q+ G R+ D VL A+E Sbjct: 428 GLDDQGLPVGLQLVGARYSDTTVLAAAYAIE 458 >mlr0229 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Mlo Mesorhizobium loti Length = 475 Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 1/173 (0%) Query: 1 MSAAELIGMSLAGLTEAYASRALSPVEVLQTVLGHAEAVNPAINALFCFRPEQAMATAQG 60 MS +L M + ++ LSPVE++Q + AEA +IN E+AM A Sbjct: 1 MSDLDLCYMPAHEALRLFKAKKLSPVELMQATIRRAEATRSSINCFTFTHFEEAMKLAAR 60 Query: 61 SEARWKAGAALGPLDGVPMTVKDSVAMIGWPYFHGIGANRALPPSNYDSPPTIALREAGA 120 +EA++ GA G L+G+P+ +KD + G P HG +R + S + +AG Sbjct: 61 AEAKYARGARAGALEGLPIGIKDESYIKGKPTSHGSLLSRD-AIGGHTSTMNERIMKAGG 119 Query: 121 VIFAKTTMPDCGLMASGISSLHGVTRNPWGLAWNTGGSSAGAGAFVAAGAGYV 173 ++ A+T P+ S GVTRNPW + GGSS GA A +A+G + Sbjct: 120 IVHARTATPEFSCAGYTWSKRWGVTRNPWNPDFTPGGSSGGAAATLASGTSSI 172