BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0103.p         (160 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGc4592 [Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit...    70   3e-12

>AGc4592 [Q] COG3485 Protocatechuate 3,4-dioxygenase beta subunit Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 295

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 2/70 (2%)

Query: 62  YPHSNDRAGAGGELLKYMGHHPWRPGHIHFMLSKDGYQSLISQIYDSETKYLDNDSVFAV 121
           YP  +D  G  G LL+ MG HP+RP H+H+++S + + +L++ I+D +  Y+ +D+VF V
Sbjct: 200 YPIPDD--GPVGRLLRAMGRHPYRPAHLHYIVSAESFTTLVTHIFDPDDPYIRSDAVFGV 257

Query: 122 KQSLIGKFAK 131
           K+SL+  F +
Sbjct: 258 KESLLANFDR 267