BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0050.p         (83 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc00970 [L] COG1722 Exonuclease VII small subunit Sme Sinorhizo...    99   3e-21
AGc1356 [L] COG1722 Exonuclease VII small subunit Atu Agrobacter...    98   5e-21
BMEI1503 [L] COG1722 Exonuclease VII small subunit Bme Brucella ...    94   9e-20
msr7470 [L] COG1722 Exonuclease VII small subunit Mlo Mesorhizob...    92   2e-19
CC2070 [L] COG1722 Exonuclease VII small subunit Ccr Caulobacter...    67   9e-12

>SMc00970 [L] COG1722 Exonuclease VII small subunit Sme Sinorhizobium
          meliloti
          Length = 83

 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 61/83 (73%)

Query: 1  MADNTQADVKKLSFERAIEELETIVKRLEDGKVPLEESVAIYERGEALKRRCEELLRQAE 60
          M +N Q DV  LSFE+A+EELE IV  LE G V L++S+ IYERGEALK+ CE LL+ AE
Sbjct: 1  MNNNAQPDVSALSFEQAVEELERIVSALERGDVALDKSIEIYERGEALKKHCEALLKAAE 60

Query: 61 ARVDKITTDASGQPTGTEPLDVQ 83
           R++KI  D +G+P G EPLD +
Sbjct: 61 DRIEKIRLDRAGRPQGVEPLDAE 83


>AGc1356 [L] COG1722 Exonuclease VII small subunit Atu Agrobacterium
          tumefaciens strain C58 (Cereon)
          Length = 86

 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 1/82 (1%)

Query: 1  MADNTQ-ADVKKLSFERAIEELETIVKRLEDGKVPLEESVAIYERGEALKRRCEELLRQA 59
          M +N   ADV   SFE+A+ ELE+IV RLE G V L+ES+AIYERGEALK+ CE LL  A
Sbjct: 3  MTENANTADVSGYSFEKAVAELESIVARLERGDVALDESIAIYERGEALKKHCETLLNAA 62

Query: 60 EARVDKITTDASGQPTGTEPLD 81
          E R++KI  D +G+P G EPLD
Sbjct: 63 EKRIEKIRLDRAGKPQGVEPLD 84


>BMEI1503 [L] COG1722 Exonuclease VII small subunit Bme Brucella melitensis
          Length = 83

 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 59/81 (72%)

Query: 1  MADNTQADVKKLSFERAIEELETIVKRLEDGKVPLEESVAIYERGEALKRRCEELLRQAE 60
          M + + AD+  +SFE A+++LE IV  LE G VPLEES+ IYERGEALK+ C+ LL+ AE
Sbjct: 1  MTEPSNADIAVMSFEDALKQLEKIVDDLERGDVPLEESIRIYERGEALKKHCDTLLKSAE 60

Query: 61 ARVDKITTDASGQPTGTEPLD 81
           +V+KI     GQP GTEPLD
Sbjct: 61 DKVEKIRIGRDGQPVGTEPLD 81


>msr7470 [L] COG1722 Exonuclease VII small subunit Mlo Mesorhizobium loti
          Length = 84

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 58/81 (71%)

Query: 1  MADNTQADVKKLSFERAIEELETIVKRLEDGKVPLEESVAIYERGEALKRRCEELLRQAE 60
          MA  T  DVK +SFE+A++ LE IV  LE G VPL++S+ IYERGEALK  C+ LL+ AE
Sbjct: 2  MAGETNEDVKAMSFEQALDALEKIVDDLERGDVPLDQSIRIYERGEALKAHCDRLLKAAE 61

Query: 61 ARVDKITTDASGQPTGTEPLD 81
           +V+KI     G+P GTEPLD
Sbjct: 62 DKVEKIRLSRDGKPVGTEPLD 82


>CC2070 [L] COG1722 Exonuclease VII small subunit Ccr Caulobacter
          vibrioides
          Length = 84

 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 2  ADNTQADVKKLSFERAIEELETIVKRLEDGKVPLEESVAIYERGEALKRRCEELLRQAEA 61
          A N  AD+  LSFE A+ +LE IV+ LE G+  LE S+ IYERG ALK  CE+ L  A  
Sbjct: 4  AANPPADISALSFEEALSQLERIVQELESGQAALERSIDIYERGAALKAHCEKKLEAARL 63

Query: 62 RVDKITTDASGQPTGTEP 79
          +V+KI     G     EP
Sbjct: 64 KVEKIVL-GQGGAVAAEP 80