BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0113.0096.p         (144 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl2624 [E] COG1364 N-acetylglutamate synthase (N-acetylornithin...   159   3e-39
SMc02450 [E] COG1364 N-acetylglutamate synthase (N-acetylornithi...   154   9e-38
mll3461 [E] COG1364 N-acetylglutamate synthase (N-acetylornithin...   148   4e-36
BMEI0124 [E] COG1364 N-acetylglutamate synthase (N-acetylornithi...   128   3e-30
CC3066 Non COG                                                         80   2e-15

>AGl2624 [E] COG1364 N-acetylglutamate synthase (N-acetylornithine
           aminotransferase) Atu Agrobacterium tumefaciens strain
           C58 (Cereon)
          Length = 413

 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/110 (73%), Positives = 92/110 (83%)

Query: 1   MSTAVSPLAPSDVPEMPAIAGVRLATAAAGIRYKGRTDVLLALLDKGTTVAGVFTKSKCP 60
           MS AVSPLAP   P+MPA+ GVR+ATAAAGI+YK RTDVLL + DK  +VAGVFTKSKCP
Sbjct: 1   MSVAVSPLAPKSYPDMPALRGVRMATAAAGIKYKNRTDVLLMVFDKPASVAGVFTKSKCP 60

Query: 61  SAPVEWCRAKLKGGAARALVVNSGNANAFTGKTGKASTALTAQIAAKAVG 110
           SAPV++CRA L  GAARA+VVNSGNANAFTG  GKA+T LTA+ AA AVG
Sbjct: 61  SAPVDFCRANLGSGAARAVVVNSGNANAFTGVKGKAATELTAKSAAAAVG 110


>SMc02450 [E] COG1364 N-acetylglutamate synthase (N-acetylornithine
           aminotransferase) Sme Sinorhizobium meliloti
          Length = 432

 Score =  154 bits (388), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 77/110 (70%), Positives = 90/110 (81%)

Query: 1   MSTAVSPLAPSDVPEMPAIAGVRLATAAAGIRYKGRTDVLLALLDKGTTVAGVFTKSKCP 60
           MS +VSPLAP    EMPA+ GVR+ATAAAGI+YK RTDVL+ L D+  +VAGVFT+SKCP
Sbjct: 20  MSGSVSPLAPKTFAEMPALRGVRMATAAAGIKYKNRTDVLMMLFDRPASVAGVFTRSKCP 79

Query: 61  SAPVEWCRAKLKGGAARALVVNSGNANAFTGKTGKASTALTAQIAAKAVG 110
           SAPV+ CR  L GG ARA+VVNSGNANAFTGK G+ +T LTA+ AAKAVG
Sbjct: 80  SAPVDHCRQNLPGGIARAVVVNSGNANAFTGKKGREATRLTAEAAAKAVG 129


>mll3461 [E] COG1364 N-acetylglutamate synthase (N-acetylornithine
           aminotransferase) Mlo Mesorhizobium loti
          Length = 413

 Score =  148 bits (373), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 76/110 (69%), Positives = 86/110 (78%)

Query: 1   MSTAVSPLAPSDVPEMPAIAGVRLATAAAGIRYKGRTDVLLALLDKGTTVAGVFTKSKCP 60
           MST +SPLAP   P+MP I GVR+ATA AGI+YK RTD+L  + D GT VAGVFTKSKCP
Sbjct: 1   MSTTISPLAPKKYPKMPVIEGVRIATAEAGIKYKNRTDLLAMVFDAGTAVAGVFTKSKCP 60

Query: 61  SAPVEWCRAKLKGGAARALVVNSGNANAFTGKTGKASTALTAQIAAKAVG 110
           SAPV++CR  L  G AR LVVNSGNANAFTGK G+ STALT + AAKA G
Sbjct: 61  SAPVDFCRQNLAAGKARVLVVNSGNANAFTGKKGRESTALTGEAAAKAAG 110


>BMEI0124 [E] COG1364 N-acetylglutamate synthase (N-acetylornithine
          aminotransferase) Bme Brucella melitensis
          Length = 413

 Score =  128 bits (322), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 74/95 (77%)

Query: 1  MSTAVSPLAPSDVPEMPAIAGVRLATAAAGIRYKGRTDVLLALLDKGTTVAGVFTKSKCP 60
          MS +VSPLAP   P MP I GVR+ATAAAGI+YKGRTD++L + D+    AGVFT+S CP
Sbjct: 1  MSASVSPLAPKYYPAMPVIHGVRIATAAAGIKYKGRTDLMLMVFDRPAEAAGVFTRSLCP 60

Query: 61 SAPVEWCRAKLKGGAARALVVNSGNANAFTGKTGK 95
          SAPV++CR  L  G ARA+VVNSGNANAFTG  G+
Sbjct: 61 SAPVDFCRRNLVHGKARAVVVNSGNANAFTGLKGR 95


>CC3066 Non COG
          Length = 403

 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/85 (52%), Positives = 56/85 (65%), Gaps = 3/85 (3%)

Query: 13 VPEMPAIAGVRLATAAAGIRYKGRTDVLLALLDKGTTVAGVFTKSKCPSAPVEWCRAKL- 71
           P +P IAGV +AT  AG     R D+LL    +GT+ AGVFT+    SAPV+WC+ +L 
Sbjct: 3  FPTIPPIAGVEIATGRAGFYKHEREDLLLMRFAEGTSAAGVFTRHGVGSAPVDWCKRQLA 62

Query: 72 -KGGA-ARALVVNSGNANAFTGKTG 94
            GGA  RALVVN+G AN+FTGK G
Sbjct: 63 ATGGADVRALVVNAGCANSFTGKPG 87