BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0113.0067.p         (236 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC3285 [T] COG2199 FOG Ccr Caulobacter vibrioides                     114   2e-25
STM2123_3 [T] COG2199 FOG Sty Salmonella typhimurium LT2              102   1e-21
PA1181_3 [T] COG2199 FOG Pae Pseudomonas aeruginosa                    99   7e-21
mll1446 [T] COG2199 FOG Mlo Mesorhizobium loti                         97   3e-20
all1175_3 [T] COG2199 FOG Nos Nostoc sp. PCC 7120                      96   8e-20

>CC3285 [T] COG2199 FOG Ccr Caulobacter vibrioides
          Length = 237

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/172 (41%), Positives = 100/172 (58%)

Query: 58  IRSLRAQLARAQARIEALQAAAETDFLLDILNRRGFERELARSLSFIKRYQASGALIVLD 117
           I  LR +++  + R+   Q  A+ D L  +LNRR F REL R  +F +RY +  +++  D
Sbjct: 62  IEDLRNEVSVLKLRLNEAQGLADMDVLTPVLNRRAFLRELKRVAAFAQRYGSPASVVFFD 121

Query: 118 VDRLKPINDAFGHAAGDEVLKAIVAAISDQVRASDVIGRLGGDEFAVLLWNLSEIDARAK 177
           +D  K +ND FGHAAGDE LKA+   +   VR SD++GR+GGDEFAVLL    +  A AK
Sbjct: 122 LDGFKSVNDRFGHAAGDEALKAVAKRLQANVRESDIVGRMGGDEFAVLLAQADKETALAK 181

Query: 178 AAALEEAIDRLTFMFRDSQVTAGASAGVAILTAHSDIDRVLDEADRAMYVRK 229
           A +L EA+      F +       S GV  +   +D +  L EAD AM++RK
Sbjct: 182 AQSLAEAVRAEPVEFGEWSAPLHISFGVREIEPGADPEAALAEADAAMFLRK 233


>STM2123_3 [T] COG2199 FOG Sty Salmonella typhimurium LT2
          Length = 194

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 1/156 (0%)

Query: 75  LQAAAETDFLLDILNRRGFERELARSLSFIKRYQASGALIVLDVDRLKPINDAFGHAAGD 134
           L  +A  D L  + NR  FE++L + L  I+      AL+ +D+DR K +ND+ GHAAGD
Sbjct: 8   LSYSATHDALTQLANRASFEKQLQQRLQTIQESPQHHALVFIDLDRFKAVNDSAGHAAGD 67

Query: 135 EVLKAIVAAISDQVRASDVIGRLGGDEFAVLLWNLSEIDARAKAAALEEAIDRLTFMFRD 194
            +L+ + + +   +R+ D++ RLGGDEF +LL + +   AR  A  L  AI+   FM+  
Sbjct: 68  ALLRELASLMLSMLRSGDLLARLGGDEFGLLLPDCNSDSARFIATRLINAINEYHFMWEG 127

Query: 195 SQVTAGASAGVAILTAHS-DIDRVLDEADRAMYVRK 229
                GASAG+ ++  H+  +  V+ +AD A Y  K
Sbjct: 128 RLHRIGASAGITMINEHNCQLTEVVSQADIACYAAK 163


>PA1181_3 [T] COG2199 FOG Pae Pseudomonas aeruginosa
          Length = 190

 Score = 99.4 bits (246), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 1/166 (0%)

Query: 65  LARAQARIEALQAAAETDFLLDILNRRGFERELARSLSFIKRYQASGALIVLDVDRLKPI 124
           + +A+A    L   A  D L  + NR  FE EL R+L+  +      AL  +D+DR K +
Sbjct: 1   VTKARAMQRELSYHASHDALTGLFNRTKFEEELQRALANAQERATQHALCFIDLDRFKVV 60

Query: 125 NDAFGHAAGDEVLKAIVAAISDQVRASDVIGRLGGDEFAVLLWNLSEIDARAKAAALEEA 184
           ND+ GHAAGD +L+ +   ++D+ RASD + RLGGDEF +LL++    +A   A+ L E 
Sbjct: 61  NDSAGHAAGDMLLRELSRILADRTRASDTLARLGGDEFGLLLFDCDLAEAEQVASKLIEQ 120

Query: 185 IDRLTFMFRDSQVTAGASAGVAILTAHS-DIDRVLDEADRAMYVRK 229
           I  + F +       GAS G+  LTA S     ++ +AD A Y  K
Sbjct: 121 ICSVRFPWEGRLYDVGASIGITALTATSRSTSELMSQADVACYAAK 166


>mll1446 [T] COG2199 FOG Mlo Mesorhizobium loti
          Length = 263

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 90/167 (53%), Gaps = 2/167 (1%)

Query: 61  LRAQLARAQARIEALQAAAETDFLLDILNRRGFERELARSLSFIKRYQASGALIVLDVDR 120
           LRA      AR E L+ AA TD L  + NRR F+  L   L   +R +    L++LD+D 
Sbjct: 86  LRAMTVSLSARSETLEHAALTDSLTGMQNRRYFDDALKEYLEEFRRIEKPVGLMILDLDH 145

Query: 121 LKPINDAFGHAAGDEVLKAIVAAISDQVRASDVIGRLGGDEFAVLLWNLSEIDARAKAAA 180
            K +ND  GH  GDEVL+A+ + + D  R  DV+ RLGG+EFAV+  N+ E D  AK A 
Sbjct: 146 FKQVNDTHGHDVGDEVLRAVASCLKDMTRYHDVVARLGGEEFAVVTPNM-EADLLAKFAE 204

Query: 181 -LEEAIDRLTFMFRDSQVTAGASAGVAILTAHSDIDRVLDEADRAMY 226
            + +AI  ++ +  + ++    S G+A+       +     ADR +Y
Sbjct: 205 RIRKAIANMSILSGNVRLKITTSVGLAVWDRKETAEEFYRRADRQLY 251


>all1175_3 [T] COG2199 FOG Nos Nostoc sp. PCC 7120
          Length = 183

 Score = 95.9 bits (237), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 92/167 (55%), Gaps = 11/167 (6%)

Query: 73  EALQAAAETDFLLDILNRRGFERELARSLSFIKRYQASGALIVLDVDRLKPINDAFGHAA 132
           E ++  A  D L  + NR  F   LA++L+   R Q S A++ LD+DR K IND  GH  
Sbjct: 7   EKIRYQALHDLLTGLPNRLLFNELLAKALANASRSQESLAVMFLDLDRFKVINDTLGHTL 66

Query: 133 GDEVLKAIVAAISDQVRASDVIGRLGGDEFAVLLWNLSEIDARAKAA-----ALEEAIDR 187
           GD +L+++   + D +R+ D + R GGDEF +LL ++S I+   +AA     ALEE    
Sbjct: 67  GDRLLQSVAQRLRDCLRSGDTVSRWGGDEFTILLPHISYIEEVTQAACRILKALEE---- 122

Query: 188 LTFMFRDSQVTAGASAGVAILTAHS-DIDRVLDEADRAMYVRKAQRR 233
             F     ++   AS G+A+L  HS D + ++  AD A+Y  K + R
Sbjct: 123 -VFHLDGHELYVSASLGIALLDHHSPDAEALIKHADAALYHAKDEGR 168