BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0113.0061.p         (461 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

all2379_2 [T] COG2202 FOG Nos Nostoc sp. PCC 7120                      71   7e-12
mll7787_1 [T] COG2202 FOG Mlo Mesorhizobium loti                       70   1e-11
slr0829_2 [T] COG2202 FOG Syn Synechocystis                            60   8e-09

>all2379_2 [T] COG2202 FOG Nos Nostoc sp. PCC 7120
          Length = 622

 Score = 70.9 bits (172), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 132/322 (40%), Gaps = 20/322 (6%)

Query: 79  RKAKRAQLRRNAF-VSSALNHLNQGVVMTDAQERIVFCNDRYLDIYGLSRADIRRNMTG- 136
           RK   A+L+++   +  AL   N G    + Q   V  +D    ++GL+      +    
Sbjct: 236 RKQAEAKLQKSEQRLKLALWAGNTGTWDWNLQTNEVIWSDHLFSLFGLTPDTFDVSYENF 295

Query: 137 VELLELRRDRGVLDLSA---------EDFFARAAAPEGLVTELPGGRSVLVKYFPLPNGG 187
           + L+    DR  L  SA          D   R   P+G V        VL          
Sbjct: 296 LNLIVHPEDREFLHQSALRAIEQQVPHDIEFRFLYPDGTVGWSLCKGQVLYDDITGEPLQ 355

Query: 188 SVATHLDCTDQRKLSRKLASTTQFLESVLDNVPVCVAAKNIEDGRYIFANRAFERFSRFS 247
            +  ++D T+++     +  + Q L++++DN P  +  K+++ GR+I  N  FER +  +
Sbjct: 356 MIGVNMDITERKNAEEAVRESNQRLQAIIDNCPAVIYVKDMQ-GRHILVNSEFERITHLT 414

Query: 248 RDHIVGKRADEIFRPETAASIDTADHAALNAAEGYH-RSEFFVERGSDKRILASNRVIAR 306
           R+ +  K   ++F P+TA S+   D   L++        E   E G    +    +    
Sbjct: 415 REQVKNKTNVKVFSPKTAQSLSVNDQEVLSSRTPVQFEEEIQFEDGLHTYLTV--KFPLC 472

Query: 307 NEAGEPEFLIALFEDVTDRRSLSRELENNKKFLELVVDNIPVSLIVQRVSDGRYLLANRS 366
           +  GEP  +  +  D+T+R+    ++      + +  D I V  +  R+     L  +R 
Sbjct: 473 DATGEPYAICGVSTDITERKQAQEQIRQQAALINVATDAIFVRDLANRI-----LFWSRG 527

Query: 367 AETILNRRREDAAGLTASDIFN 388
           AE +     E+  G  A ++F+
Sbjct: 528 AENLYGWTAEETVGKLAHELFH 549


>mll7787_1 [T] COG2202 FOG Mlo Mesorhizobium loti
          Length = 287

 Score = 69.7 bits (169), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 7/159 (4%)

Query: 88  RNAFVSSALNHLNQGVVMTDAQERIVFCNDRYLDIYGLSRADIRRNMTGVELLELRRDRG 147
           +N   S+A+ +++ G+ M DA ER++ CN  Y++I+ L    +R  +  +++L    D G
Sbjct: 44  QNERFSAAVENMSHGLCMFDADERMIICNGNYINIFCLDAKLVRPGIHFIDILRHSVDIG 103

Query: 148 VLDLSAEDFFA------RAAAPEGLVTELPGGRSVLVKYFPLPNGGSVATHLDCTDQRKL 201
           +   SA++ +A        A P      L  GR + + + PL  GG V+ + D T+QR+ 
Sbjct: 104 IASQSADELYAVRKPYIDQAKPSTYEETLSDGRIINISHRPLALGGWVSIYEDITEQRRA 163

Query: 202 SRKLASTTQFLESVLDNVPVCVAAKNIEDGRYIFANRAF 240
            + L    +  ++ L N+   +   +  DG+ I  NR F
Sbjct: 164 EQDLKEQHRRFDAALANMSQGLLMYD-ADGKMIVRNRRF 201


>slr0829_2 [T] COG2202 FOG Syn Synechocystis
          Length = 531

 Score = 60.5 bits (145), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 6/212 (2%)

Query: 194 DCTDQRKLSRKLASTTQFLESVLDNVPVCVAAKNIEDGRYIFANRAFERFSRFSRDHIVG 253
           D +  ++   +L  + +F+ES+ +  P  +   +      I++NR+   F  +S + I  
Sbjct: 115 DISALKETQLELRQSQKFIESIAEATPSLLYIYDHIKQANIYSNRSVAEFLGYSPEEIKT 174

Query: 254 KRAD---EIFRPETAASIDTADHAALNAAEG-YHRSEFFVE--RGSDKRILASNRVIARN 307
             A     I  PE    I  A        +G     E+ V   R   + +L+ + V  R 
Sbjct: 175 MGASLFTNICHPEDLPRILAAIENCQKLRDGEILEIEYRVRDARQQWRWLLSRDLVFTRT 234

Query: 308 EAGEPEFLIALFEDVTDRRSLSRELENNKKFLELVVDNIPVSLIVQRVSDGRYLLANRSA 367
           E G+    +   +D+T R+    ELE  K FL  +V+NIP  + V+     R+L  N++ 
Sbjct: 235 ETGQLWQTLGTAQDITQRKEAEIELEKIKTFLASIVENIPDMIFVKDAKTLRFLELNKAG 294

Query: 368 ETILNRRREDAAGLTASDIFNAREAKLIIARD 399
           E+++   +E+  G    ++F    A+  I  D
Sbjct: 295 ESLIGYTKEEVLGKNDYELFPQERAEWFIQED 326