BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0113.0002.p         (162 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb20174 [C] COG2010 Cytochrome c, mono- and diheme variants Sme...   197   8e-51

>SMb20174 [C] COG2010 Cytochrome c, mono- and diheme variants Sme
           Sinorhizobium meliloti
          Length = 176

 Score =  197 bits (501), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 95/158 (60%), Positives = 116/158 (73%), Gaps = 2/158 (1%)

Query: 3   MGGVASAEDA--GDPTAVKSEDGKYLDKDGNPTFKVTADGTTDWYTYSGYRRYHSECHVC 60
           M   A AEDA   + TAV+ E+G+Y   D  PTFK+  DGT DW TYSG+RRYHSECHVC
Sbjct: 18  MASAAGAEDAPKDNITAVRDENGRYYTADDVPTFKIAEDGTVDWLTYSGFRRYHSECHVC 77

Query: 61  HGPDGMGSTYAPALANSLKTMSYADFMGVVASGRKNVSTAQENVMPAFGDNPNVACYMDD 120
           HGP+G GS+YAPAL  S   M Y DF+ VV +GRK V+ A+ +VMPAFG+N NV CY+DD
Sbjct: 78  HGPEGEGSSYAPALKTSAINMDYYDFVDVVTNGRKKVNAAENSVMPAFGENVNVMCYLDD 137

Query: 121 LYVYLRARANDAVGRVRPAKHEDKSEAYGKAEDACMGH 158
           +YVYL+AR  DA+ R RPAK E KS+A  +AE AC+GH
Sbjct: 138 IYVYLKARGADALPRGRPAKKEAKSDAIKEAETACLGH 175