BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0112.0019.p         (88 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2604 Non COG                                                        74   7e-14

>RSc2604 Non COG
          Length = 94

 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 6/82 (7%)

Query: 2  SDRSIKR-GFASRPG---DAESWIKASDTPPRSVNDAAAFTARLTIDVTPTLRGRIKVAA 57
          S R+ KR G  +RP     AE+WI+  D    ++     +TARLT+D+TP +R RIKV+A
Sbjct: 12 SKRTGKRVGIGARPPANPHAEAWIRQGDA--DALGKGDLYTARLTLDITPAMRARIKVSA 69

Query: 58 FQRGVTVADMLRELLAREFPAD 79
          F +GVTVAD+LR LL REFP++
Sbjct: 70 FTQGVTVADLLRGLLEREFPSE 91