BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0111.0004.p         (125 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll7793 [S] COG5451 Predicted secreted protein Mlo Mesorhizobium...   124   4e-29
BMEI1277 [S] COG5451 Predicted secreted protein Bme Brucella mel...   107   6e-24
SMc02555 [S] COG5451 Predicted secreted protein Sme Sinorhizobiu...    92   4e-19
AGc1949 [S] COG5451 Predicted secreted protein Atu Agrobacterium...    88   4e-18

>mll7793 [S] COG5451 Predicted secreted protein Mlo Mesorhizobium loti
          Length = 125

 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 83/126 (65%), Gaps = 2/126 (1%)

Query: 1   MIRAFLAVVILMSACLLTPAR-AQDAAAPFDGDLQRLAEILGALHYLRGICGSNEGAKWR 59
           M RA   V + ++A      R A  A +PF+  L RLAE+LG+LH+LR +CG  +G +WR
Sbjct: 1   MSRAPFLVALCLAASTAVAVRPAFSAESPFEPGLMRLAEVLGSLHFLRNLCG-EKGDQWR 59

Query: 60  NEMQALIDAETPSGDRRARMIAGFNRGYNGFQQTYRTCTPAATVAIRRYIEEGSKISRDL 119
            EM+ L+D+E P  +RRAR IA FNRGY  F  TY  CT +AT AI RY++EG  +SRD+
Sbjct: 60  GEMEKLLDSENPDPERRARFIASFNRGYRSFGGTYTQCTASATEAISRYMKEGETLSRDI 119

Query: 120 TARYAN 125
            +RY N
Sbjct: 120 ASRYGN 125


>BMEI1277 [S] COG5451 Predicted secreted protein Bme Brucella melitensis
          Length = 111

 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 3/114 (2%)

Query: 12  MSACLLTPARAQDAAAPFDGDLQRLAEILGALHYLRGICGSNEGAKWRNEMQALIDAETP 71
           M   +  P  AQDA  P++G + RLAE LG+LHYLR +CG  +G++WR+ M A+I AE P
Sbjct: 1   MWLAVCPPVLAQDA--PYEGMMLRLAEALGSLHYLRNLCGE-KGSEWRDRMDAIIAAEKP 57

Query: 72  SGDRRARMIAGFNRGYNGFQQTYRTCTPAATVAIRRYIEEGSKISRDLTARYAN 125
               R ++++ FN GY  F   Y  CTP+A  AI RY++EG  +S ++ +RY N
Sbjct: 58  PEAERLKLVSSFNHGYRVFSDNYARCTPSALAAIDRYMKEGGDLSNEIISRYGN 111


>SMc02555 [S] COG5451 Predicted secreted protein Sme Sinorhizobium meliloti
          Length = 147

 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 2/110 (1%)

Query: 18  TPARAQD-AAAPFDGDLQRLAEILGALHYLRGICGSNEGAKWRNEMQALIDAETP-SGDR 75
           +P+ AQ+    P+D  L RLAEILG++HYLR +C       WR   Q LID E      R
Sbjct: 38  SPSPAQEEKPTPYDQRLIRLAEILGSVHYLRNLCLDQSEDGWRRSTQELIDKEAAGEPKR 97

Query: 76  RARMIAGFNRGYNGFQQTYRTCTPAATVAIRRYIEEGSKISRDLTARYAN 125
           R R+ A FNRGY  F   Y  CT  AT+A  RY  EG+ ++ ++ AR+ N
Sbjct: 98  RERITAAFNRGYRTFASVYTRCTEPATLAEERYRAEGATLASEIVARFGN 147


>AGc1949 [S] COG5451 Predicted secreted protein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 186

 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 1/98 (1%)

Query: 29  FDGDLQRLAEILGALHYLRGICGSNEGAKWRNEMQALIDAETPS-GDRRARMIAGFNRGY 87
           +D  L RL+EILGA+ YLR +C S+    WR  M AL+ A+T S  +RR RM A FNRGY
Sbjct: 89  YDDKLARLSEILGAVQYLRTLCPSSGPEDWRKSMSALLAADTASEPERRQRMTAAFNRGY 148

Query: 88  NGFQQTYRTCTPAATVAIRRYIEEGSKISRDLTARYAN 125
             F   + +CT AA +A   Y  EG+ +++++ +R+ N
Sbjct: 149 RSFAAIHTSCTRAAIMAEENYRNEGATLAQEIASRFGN 186