BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0110.0043.p         (551 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA0208 Non COG                                                        622   e-178

>PA0208 Non COG
          Length = 554

 Score =  622 bits (1603), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 307/543 (56%), Positives = 395/543 (72%), Gaps = 6/543 (1%)

Query: 12  TTQRTDRTARLARARAVCGTNGKVCPPDRAIELLEAVIASGDRVALEGDNQKQADFLAAC 71
           + +R ++  RL R R +   +G V P +  +  LEA+IA GDRV LEG+NQKQADFL+  
Sbjct: 12  SRRRQEKQRRLERVRGLA--DGAVLPREGLVAALEALIAPGDRVVLEGNNQKQADFLSRS 69

Query: 72  LAGVNPARVHDLHMVQSVLALPDHLAVFERGIANRLDFAFAGPQSRRLAELVAAKALRIG 131
           LA V+P ++HDLHM+   +  P+HL +FE GIA +LDF+F+GPQS R+ +L+    L IG
Sbjct: 70  LARVDPGKLHDLHMIMPSVGRPEHLDLFELGIARKLDFSFSGPQSLRIGQLLEDGLLEIG 129

Query: 132 AIHTYLELYARMLVDLTPQVALIVADKADRDGNLYTGPNTEDTPTIAEAAAFRGGVVVAQ 191
           AIHTY+ELYAR++VDL P VAL+    ADR+GN+YTGP+TEDTP + E  AF  G+V+ Q
Sbjct: 130 AIHTYIELYARLVVDLIPNVALVAGFVADREGNVYTGPSTEDTPALVEPTAFSDGIVIVQ 189

Query: 192 VNEIVDH---LPRVDIPGDWVDVVVPGPKPYAIDPLFTRDPAKVRDENVLMAMMALAAVY 248
           VN IVD    LPRVDIP  WVD VV   +P+ I+PLFTRDP  ++  +VLMAMMA+  +Y
Sbjct: 190 VNRIVDDPRDLPRVDIPASWVDFVVEADQPFYIEPLFTRDPRHIKPVHVLMAMMAIRGIY 249

Query: 249 EPYQVTRLNHGIGYATAAIELILPTFAARRGLKGRVARNFVLNPHPTLIPAIEAGFVDNV 308
           + + V  LNHGIG+ TAAIELILPT+    GLKG++ R++ LNPHPTLIPAIE+G+V++V
Sbjct: 250 QRHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRHWTLNPHPTLIPAIESGWVESV 309

Query: 309 YCFGSELGMERYVASRPDVFPVGADGNLRSNRALAQVAGQYACDLFVGGTLQIDPEGNSS 368
           +CFG+ELGME Y+A RPDVF  G DG+LRSNR   Q+AGQYA DLF+G TLQ+D +G+SS
Sbjct: 310 HCFGTELGMEGYIAQRPDVFFTGRDGSLRSNRMFCQLAGQYAVDLFIGATLQVDGDGHSS 369

Query: 369 TATKDRITGFGGAPNMGADPRGRRHDSVAWLRA-GEEAGERLRGRKLVVQMVQTRQPNGA 427
           T T+ R+ GFGGAPNMG DPRGRRH + AWL   GE      RGRKLVVQMV+T Q  G 
Sbjct: 370 TVTRGRLAGFGGAPNMGHDPRGRRHSTPAWLDMRGEPEALLERGRKLVVQMVETFQDGGK 429

Query: 428 ASFVERLDAFDLAASAGFALPPVMIHGDDVSHVITERGVCNLLRCRSPQEREAALRAIAG 487
            +FVERLDA ++A   G  L PVMI+GDDV+HV+TE G+  L + RS +ER+A + A+AG
Sbjct: 430 PTFVERLDALEVARQTGMPLAPVMIYGDDVTHVLTEEGIAYLYKARSLEERQAMIAAVAG 489

Query: 488 DTEFGRRQDAGTTDGLRRRGIVMLPSDLGLDVETATRDWLAAKSIDDLVAASGGLYAPPA 547
            +  G R D   T  +RR G++ LP DLG+    A+R+ LAAKSI +LV  SGGLY PPA
Sbjct: 490 ISPIGLRHDPRETQRMRREGLIALPEDLGIRRTDASRELLAAKSIAELVEWSGGLYQPPA 549

Query: 548 KFR 550
           +FR
Sbjct: 550 RFR 552