BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0110.0021.p         (196 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AGl2798 [R] COG1853 Conserved protein/domain typically associate...   162   4e-40
mll3444 [R] COG1853 Conserved protein/domain typically associate...   161   1e-39
SMc00514 [R] COG1853 Conserved protein/domain typically associat...   102   8e-22
BMEI0709 [R] COG1853 Conserved protein/domain typically associat...   101   1e-21
mlr0087 [R] COG1853 Conserved protein/domain typically associate...    93   3e-19

>AGl2798 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 181

 Score =  162 bits (411), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 81/160 (50%), Positives = 113/160 (70%), Gaps = 1/160 (0%)

Query: 13  AVAAAEFRGAMRHLTGGVSVITAGRAKDISGMTVTSVSSLSVEPPSLIVSINRAASSWPL 72
           A  A   + A+R L GGVSVITAG   + +G TVTS ++LSV+PP ++V++NR++S+WP+
Sbjct: 23  AADADSLKAALRTLGGGVSVITAGEGDERTGATVTSATALSVDPPRILVALNRSSSTWPV 82

Query: 73  IARHGVFGVNILAADQRDIAERFTGKGGLKGADRFTGAEWTTRASGVPLLVGALAAVDCE 132
           +   G F VNI+  + + +A +F G GGLKG DR+ GAEWT  ASG P+L  A+AA+DC 
Sbjct: 83  VQSFGHFAVNIIGTNHQFVANQFAGIGGLKGPDRYRGAEWTRLASGAPILEDAVAAIDCT 142

Query: 133 VEETIERHSHVIVIGRVLDVIASERTAALAYWHGEYVAID 172
           +EETIERHSHVIVIG+V + I      +L Y +G Y ++D
Sbjct: 143 IEETIERHSHVIVIGKV-EAIRVGSGHSLLYQNGRYHSLD 181


>mll3444 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Mlo
           Mesorhizobium loti
          Length = 167

 Score =  161 bits (407), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/162 (50%), Positives = 106/162 (65%)

Query: 11  EPAVAAAEFRGAMRHLTGGVSVITAGRAKDISGMTVTSVSSLSVEPPSLIVSINRAASSW 70
           E  V+ A+FR AMR + G VSVITAG   D SG+ V SV SLS EPP +I  +NR++S+W
Sbjct: 5   EAQVSVADFRAAMRLIVGNVSVITAGVGDDRSGLVVISVVSLSAEPPKVIACVNRSSSTW 64

Query: 71  PLIARHGVFGVNILAADQRDIAERFTGKGGLKGADRFTGAEWTTRASGVPLLVGALAAVD 130
           P+I R+  FGVN L    + +AERF+G GG+KG DR+ GAEW T  +G  LL  A+AA D
Sbjct: 65  PVIERYRHFGVNSLGPQHQAVAERFSGFGGIKGKDRYEGAEWVTLKTGAALLSDAVAAFD 124

Query: 131 CEVEETIERHSHVIVIGRVLDVIASERTAALAYWHGEYVAID 172
           C ++E I+R +H IVIG V  V   +   AL YW G Y  +D
Sbjct: 125 CSLDEMIDRGTHSIVIGSVEAVRTRDAGQALIYWRGGYRPLD 166


>SMc00514 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Sme
           Sinorhizobium meliloti
          Length = 175

 Score =  102 bits (253), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 82/145 (56%)

Query: 19  FRGAMRHLTGGVSVITAGRAKDISGMTVTSVSSLSVEPPSLIVSINRAASSWPLIARHGV 78
           +R AM  ++  V +ITA   K+  G+T+T+  S+S +PP+++  +N A     + +R G 
Sbjct: 23  YRDAMSRMSSHVQLITAADGKERRGVTITASCSVSDDPPTVLACLNAANRRNDIFSRGGS 82

Query: 79  FGVNILAADQRDIAERFTGKGGLKGADRFTGAEWTTRASGVPLLVGALAAVDCEVEETIE 138
           F +N+L A    +A  F+G+  L    RF    WT R +G P+LV A+AA DC + E  E
Sbjct: 83  FALNLLGAQHHALAHAFSGRDQLDMERRFALGRWTQRTTGAPILVEAIAAFDCRLIEVKE 142

Query: 139 RHSHVIVIGRVLDVIASERTAALAY 163
             +H+I+IG V+DV    +   L Y
Sbjct: 143 VATHLILIGEVVDVQLGPKQPPLIY 167


>BMEI0709 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Bme Brucella
           melitensis
          Length = 173

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 3/168 (1%)

Query: 1   MNSVVRNVSIEPAVAAAEFRGAMRHLTGGVSVITAGRAKDISGMTVTSVSSLSVEPPSLI 60
           +N+++ +VS    V +  +R AM H  G V ++T   A    G+T+T+  S+S  PP+++
Sbjct: 4   VNNIISSVS---TVESKAYRDAMSHYAGAVQIVTTAGAAGRRGLTLTAACSVSDNPPTIL 60

Query: 61  VSINRAASSWPLIARHGVFGVNILAADQRDIAERFTGKGGLKGADRFTGAEWTTRASGVP 120
           + + +      +   +GVF +N LA   + +A+ F+G+ GL   +RF  A W   A+G P
Sbjct: 61  ICLQKIHEENRIFIENGVFAINTLAGPHQQLADAFSGRIGLTQDERFELAAWEILATGAP 120

Query: 121 LLVGALAAVDCEVEETIERHSHVIVIGRVLDVIASERTAALAYWHGEY 168
           +L GALAA DC V    +  +H ++ G V+ + +     AL Y +  Y
Sbjct: 121 VLKGALAAFDCRVVSVQDHSTHHVLFGEVVGLSSHAEEEALIYLNRRY 168


>mlr0087 [R] COG1853 Conserved protein/domain typically associated with
           flavoprotein oxygenases, DIM6/NTAB family Mlo
           Mesorhizobium loti
          Length = 175

 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%)

Query: 19  FRGAMRHLTGGVSVITAGRAKDISGMTVTSVSSLSVEPPSLIVSINRAASSWPLIARHGV 78
           +R AM H  G V V+T        G TV +  S+S  PP+++V +NR  ++  L  ++G 
Sbjct: 12  YRDAMSHFAGHVHVVTTDGPAGKRGTTVIAACSVSDTPPTILVCLNRENANNELFVKNGR 71

Query: 79  FGVNILAADQRDIAERFTGKGGLKGADRFTGAEWTTRASGVPLLVGALAAVDCEVEETIE 138
           F +N LA+ Q  ++  F+G  GL   +RF   EW   ++G P L GALA  DCE+ +T +
Sbjct: 72  FALNTLASHQEPLSIGFSGITGLPVEERFALGEWDVISTGAPTLKGALAVFDCELIDTKD 131

Query: 139 RHSHVIVIGRVLDVIASERTAALAYWHGEYVAID 172
             +H ++ G+V  +   +    L Y    Y  +D
Sbjct: 132 LATHRVLFGKVTGLRMGDNLRPLIYHARGYHVLD 165