BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0110.0016.p         (241 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll4555 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans...   177   2e-44
PA3442 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transp...   160   3e-39
AGl1395 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans...   157   2e-38
AGpT165 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate trans...   149   6e-36
ssuB [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transpor...   141   1e-33

>mll4555 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Mlo Mesorhizobium loti
          Length = 265

 Score =  177 bits (449), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 94/161 (58%), Positives = 111/161 (68%), Gaps = 3/161 (1%)

Query: 39  SLTIRGLRKAFGDNEVLRGIDLHIPAGQFVAIVGRSGCGKSTLLRLIAGLDAPTAGSIAF 98
           +   +G+ K FGD  VL GIDL +PAGQFVA++G+SGCGKSTLLRL+AGLD PT+GS+  
Sbjct: 30  AFAFKGVEKRFGDKIVLDGIDLDVPAGQFVAVIGKSGCGKSTLLRLLAGLDRPTSGSLTL 89

Query: 99  GEQPRAQD-VRVMFQEPRLLPWARVLSNVEVGLGRERASADAQARAERALVEVGLGDKRT 157
           G +       R MFQEPRLLPWA V+ NVE+GL    A  DA+ RA   L EVGL D+  
Sbjct: 90  GAEEEGHSRTRFMFQEPRLLPWASVVKNVEIGLTGIAAGQDARQRALDILGEVGLADRAD 149

Query: 158 QWPSVLSGGQKQRVALARALVCH--IRKLDRRCSPLVRMIR 196
           +WPSVLSGGQKQRVALARALV H  I  LD     L  + R
Sbjct: 150 EWPSVLSGGQKQRVALARALVGHPQILALDEPLGALDALTR 190


>PA3442 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Pae Pseudomonas aeruginosa
          Length = 274

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 87/157 (55%), Positives = 111/157 (70%), Gaps = 8/157 (5%)

Query: 31  PEGAARGLSLTIRGLRKAFGDNEVLRGIDLHIPAGQFVAIVGRSGCGKSTLLRLIAGLDA 90
           P+   RG+ L +RG+ + FG+ EVL+ IDL +PAGQFVAIVGRSGCGKSTLLRL+AGLD 
Sbjct: 12  PQRLKRGIPLALRGVARRFGEREVLKDIDLLVPAGQFVAIVGRSGCGKSTLLRLLAGLDQ 71

Query: 91  PTAGSIAFGEQPRA---QDVRVMFQEPRLLPWARVLSNVEVGLGRERASADAQARAERAL 147
           P+ G +  G    A   +D R+MFQ+ RLLPW RV+ NV +GL       D +A+A +AL
Sbjct: 72  PSRGELLAGSAALAEAREDTRLMFQDSRLLPWKRVIDNVGLGL-----RGDWRAKALQAL 126

Query: 148 VEVGLGDKRTQWPSVLSGGQKQRVALARALVCHIRKL 184
             VGL ++  +WP+ LSGGQKQRVALARAL+   R L
Sbjct: 127 RAVGLAERANEWPAALSGGQKQRVALARALIHEPRLL 163


>AGl1395 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 276

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 79/143 (55%), Positives = 102/143 (71%), Gaps = 3/143 (2%)

Query: 38  LSLTIRGLRKAFGDNEVLRGIDLHIPAGQFVAIVGRSGCGKSTLLRLIAGLDAPTAGSIA 97
           ++ + R + K+FGD  VLRGIDL +  G+F+A++G+SGCGKSTLLR++AGLD PT G+++
Sbjct: 37  VAFSFRNVTKSFGDKPVLRGIDLDVREGEFLAVIGKSGCGKSTLLRILAGLDTPTTGTVS 96

Query: 98  FGEQPRAQDVRVMFQEPRLLPWARVLSNVEVGLGRERASADAQARAERALVEVGLGDKRT 157
                R    R+MFQEPRLLPW R+ +NV VGL        A+ +A   L EVGL D+  
Sbjct: 97  KDPSNRT---RMMFQEPRLLPWERIANNVSVGLTGIAKGEAAREQALGILDEVGLKDRAG 153

Query: 158 QWPSVLSGGQKQRVALARALVCH 180
           +WP VLSGGQKQRVALARALV H
Sbjct: 154 EWPYVLSGGQKQRVALARALVAH 176


>AGpT165 [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 271

 Score =  149 bits (376), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 82/154 (53%), Positives = 104/154 (67%), Gaps = 8/154 (5%)

Query: 34  AARGLSLTIRGLRKAFGDNEVLRGIDLHIPAGQFVAIVGRSGCGKSTLLRLIAGLDAPTA 93
           +A G +L I GL K F   EVL+G+ L++PAGQF++IVGRSGCGKSTLLRLIA L+    
Sbjct: 23  SAGGAALDILGLWKGFDGTEVLKGLSLNVPAGQFLSIVGRSGCGKSTLLRLIADLETIDG 82

Query: 94  GSIAFGEQPRAQ---DVRVMFQEPRLLPWARVLSNVEVGLGRERASADAQARAERALVEV 150
           G+I     P ++   +VR+MFQ+ RLLPW  VL N+ +GL         Q RA +AL EV
Sbjct: 83  GTIQIDGNPLSEISGEVRMMFQDARLLPWRTVLQNIGIGLPNP-----WQNRARKALAEV 137

Query: 151 GLGDKRTQWPSVLSGGQKQRVALARALVCHIRKL 184
           GL +   +WPS LSGGQ+QRVALARAL+   R L
Sbjct: 138 GLSEHADKWPSQLSGGQRQRVALARALIHRPRLL 171


>ssuB [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport
           system, ATPase component Eco Escherichia coli K12
          Length = 255

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/146 (54%), Positives = 100/146 (68%), Gaps = 8/146 (5%)

Query: 36  RGLSLTIRGLRKAFGDNEVLRGIDLHIPAGQFVAIVGRSGCGKSTLLRLIAGLDAPTAGS 95
           +G  L +  + K + +N VL  +DLHIPAGQFVA+VGRSG GKSTLLRL+AGL+ PTAG 
Sbjct: 8   QGTPLLLNAVSKHYAENIVLNQLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGD 67

Query: 96  IAFGEQPRA---QDVRVMFQEPRLLPWARVLSNVEVGLGRERASADAQARAERALVEVGL 152
           +  G  P A   +D R+MFQ+ RLLPW  V+ NV +GL         +  A RAL  VGL
Sbjct: 68  VLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVGLGL-----KGQWRDAARRALAAVGL 122

Query: 153 GDKRTQWPSVLSGGQKQRVALARALV 178
            ++  +WP+ LSGGQKQRVALARAL+
Sbjct: 123 ENRAGEWPAALSGGQKQRVALARALI 148