BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0110.0013.p (198 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 236 2e-62 RSp1383 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 189 2e-48 RSc1338 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 187 2e-47 YPO3624 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 169 3e-42 ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transpor... 165 6e-41 >PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 323 Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 111/196 (56%), Positives = 149/196 (76%) Query: 1 VPKDSAIKSVADLKGKKVALNKGSNVHYLLVKALEKAGVKYSEIEPVFLAPADARAAFER 60 +PKDS I+SVA+LKG+KVALNKGSNVHYLLV+ALE+AG+KYS+I+PV+L PADARAAFER Sbjct: 119 LPKDSPIRSVAELKGRKVALNKGSNVHYLLVRALEQAGLKYSDIQPVYLPPADARAAFER 178 Query: 61 GAVDAWVIWDPFQAAAEAATGARTVADGTGIVANYQFYFASKKFLQADPKIVELVLAQLS 120 +VDAWVIWDP+QAAAE AR + DG +V N+QFY A++ + Q P++++ ++ ++ Sbjct: 179 HSVDAWVIWDPYQAAAEKQLSARVLVDGRELVDNHQFYLATRTYAQRHPQVLDKLVDEIR 238 Query: 121 EVDDWAKGDIHAVAEQLAPSIGLSVPVVEVALKRQAYGIKPVTDAVVADQQQVADTFFAL 180 EV DW++ + V EQ+AP +GL + A+KRQ YG + +T AVV QQ++ADTF L Sbjct: 239 EVGDWSRANPQQVTEQVAPLLGLPADITLTAVKRQGYGAQLITPAVVEAQQKIADTFTQL 298 Query: 181 GLIPKQIKISDVAWRP 196 LIPK + I DV W P Sbjct: 299 KLIPKPLSIKDVIWTP 314 >RSp1383 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Rso Ralstonia solanacearum Length = 334 Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 91/191 (47%), Positives = 127/191 (66%) Query: 5 SAIKSVADLKGKKVALNKGSNVHYLLVKALEKAGVKYSEIEPVFLAPADARAAFERGAVD 64 S + VADLKGK++AL KGS+ +YLLV+ L++AG+ +I+P++L PA+ARAAFE GAVD Sbjct: 135 SPARGVADLKGKRIALQKGSSSNYLLVQLLKRAGLTVQDIQPIYLPPAEARAAFESGAVD 194 Query: 65 AWVIWDPFQAAAEAATGARTVADGTGIVANYQFYFASKKFLQADPKIVELVLAQLSEVDD 124 AWV+WDP+ A A+ A RT+AD TG+ + + FY A+ F+QA P+ V +LAQL Sbjct: 195 AWVVWDPYYALAQTALKVRTLADYTGLPSPFNFYEATPGFVQAHPRAVNAILAQLRTTGL 254 Query: 125 WAKGDIHAVAEQLAPSIGLSVPVVEVALKRQAYGIKPVTDAVVADQQQVADTFFALGLIP 184 W A L+P +G++ PVVE L+R YG+ P+T V+A QQQVAD F LIP Sbjct: 255 WVNRHPRETAALLSPKLGIAPPVVETWLRRVPYGVTPITPEVIAAQQQVADLFHQQKLIP 314 Query: 185 KQIKISDVAWR 195 + + + WR Sbjct: 315 RPVSVQGAVWR 325 >RSc1338 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Rso Ralstonia solanacearum Length = 336 Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 89/197 (45%), Positives = 134/197 (68%), Gaps = 1/197 (0%) Query: 1 VPKDSAIKSVADLKGKKVALNKGSNVHYLLVKALEKAGVKYSEIEPVFLAPADARAAFER 60 VP+ SA++++ADLKGK+VAL KGS+ H+L+V L K G+ +++I+PV+L PADARAAFER Sbjct: 130 VPRGSALQALADLKGKRVALQKGSSAHFLVVSGLRKGGLTFADIQPVYLTPADARAAFER 189 Query: 61 GAVDAWVIWDPFQAAAEAATGARTVADGTGIVANYQFYFASKKFLQADPKIVELVLAQLS 120 G+VDAW IWDP+ AA E A G R +A G G+ +N FYFA + F + + + A+L+ Sbjct: 190 GSVDAWGIWDPYYAATELAIGPRVLATGRGLSSNNTFYFAPRAFAEQHGDTIAALFAELA 249 Query: 121 EVDDWAKGDIHAVAEQLAPSIGLSVPVVEVALKRQAYG-IKPVTDAVVADQQQVADTFFA 179 D + + A+++A GLS+ V + L R+ ++PVT +A+QQ+VAD F Sbjct: 250 RADRLVQQNRKEAAQRIAEFSGLSLATVHLFLSRRPPSPVRPVTPEAIAEQQRVADAFHG 309 Query: 180 LGLIPKQIKISDVAWRP 196 LGLIP+ ++ +D+ W+P Sbjct: 310 LGLIPRPVRPADLVWQP 326 >YPO3624 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Ype Yersinia pestis Length = 373 Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 89/197 (45%), Positives = 128/197 (64%), Gaps = 1/197 (0%) Query: 1 VPKDSAIKSVADLKGKKVALNKGSNVHYLLVKALEKAGVKYSEIEPVFLAPADARAAFER 60 VP++SAI SVA+LKG KVA KGS+ H LL++AL+KAG+K+++I+PV+L PADARAAF++ Sbjct: 130 VPENSAINSVAELKGHKVAFQKGSSSHNLLLQALQKAGLKFTDIQPVYLTPADARAAFQQ 189 Query: 61 GAVDAWVIWDPFQAAAEAATGARTVADGTGIVANYQFYFASKKFLQADPKIVELVLAQLS 120 G VDAWVIWDP+ +AA G R + DG+ + FY AS+ + +A+ ++ VL L+ Sbjct: 190 GNVDAWVIWDPYYSAALLQGGIRVLIDGSQLNQTGSFYLASRPYTEANGPFIQQVLEVLT 249 Query: 121 EVDDWAKGDIHAVAEQLAPSIGLSVPVVEVAL-KRQAYGIKPVTDAVVADQQQVADTFFA 179 + D D LA ++GL V+ L R I+P++ A VA QQ+ AD FFA Sbjct: 250 QADALTLSDRAQSITLLANAMGLPEAVIASYLDHRPPTAIQPLSQATVAAQQRTADLFFA 309 Query: 180 LGLIPKQIKISDVAWRP 196 L+P ++ IS W+P Sbjct: 310 NRLLPVKVDISQRVWQP 326 >ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Eco Escherichia coli K12 Length = 333 Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 86/197 (43%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 1 VPKDSAIKSVADLKGKKVALNKGSNVHYLLVKALEKAGVKYSEIEPVFLAPADARAAFER 60 V ++S IK+VADLKG KVA KGS+ H LL++AL +AG+K+++I+P +L PADARAAF++ Sbjct: 129 VAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQ 188 Query: 61 GAVDAWVIWDPFQAAAEAATGARTVADGTGIVANYQFYFASKKFLQADPKIVELVLAQLS 120 G VDAW IWDP+ +AA G R + DGT + FY A++ + + + ++ VLA S Sbjct: 189 GNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFS 248 Query: 121 EVDDWAKGDIHAVAEQLAPSIGLSVPVVEVAL-KRQAYGIKPVTDAVVADQQQVADTFFA 179 E D + LA ++GL PV+ L R IKPV V A QQQ AD F+ Sbjct: 249 EADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYE 308 Query: 180 LGLIPKQIKISDVAWRP 196 L+PK++ I W+P Sbjct: 309 NRLVPKKVDIRQRIWQP 325