BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0108.0009.p         (76 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr0213 [M] COG0860 N-acetylmuramoyl-L-alanine amidase Mlo Mesor...    73   2e-13
SMc01335 [M] COG0860 N-acetylmuramoyl-L-alanine amidase Sme Sino...    64   1e-10
PA5538 [M] COG0860 N-acetylmuramoyl-L-alanine amidase Pae Pseudo...    62   3e-10
BMEI1056 [M] COG0860 N-acetylmuramoyl-L-alanine amidase Bme Bruc...    62   4e-10
RSc2539 [M] COG0860 N-acetylmuramoyl-L-alanine amidase Rso Ralst...    60   1e-09

>mlr0213 [M] COG0860 N-acetylmuramoyl-L-alanine amidase Mlo Mesorhizobium
           loti
          Length = 420

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 45/64 (70%)

Query: 1   MRTTVRMHKHPLKSAGFRVLKAPDVPSVLVEIGYVSNKGDLEHLVSESWRNKAVGSMVQA 60
           + T+V +  +P +SAGF+VLKAPDVPSVLVE+GY+SN  D   L++  WR KA  S+  A
Sbjct: 346 LSTSVGLINNPQRSAGFKVLKAPDVPSVLVELGYLSNAKDEAQLLNAEWRGKAAQSITNA 405

Query: 61  IDTF 64
           +  F
Sbjct: 406 VALF 409


>SMc01335 [M] COG0860 N-acetylmuramoyl-L-alanine amidase Sme Sinorhizobium
           meliloti
          Length = 410

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 44/69 (63%)

Query: 5   VRMHKHPLKSAGFRVLKAPDVPSVLVEIGYVSNKGDLEHLVSESWRNKAVGSMVQAIDTF 64
           +++  +P + AGFRVL+APDVPSVL+E+G++SNK D + L+   WR K    +  A+  +
Sbjct: 342 IKLINNPHRHAGFRVLQAPDVPSVLLELGFLSNKEDEKQLLDAEWRKKVSTLLADAVQRY 401

Query: 65  FAKRLATAG 73
               +A  G
Sbjct: 402 RNSAVANGG 410


>PA5538 [M] COG0860 N-acetylmuramoyl-L-alanine amidase Pae Pseudomonas
           aeruginosa
          Length = 397

 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)

Query: 7   MHKHPLKSAGFRVLKAPDVPSVLVEIGYVSNKGDLEHLVSESWRNKAVGSMVQAIDTFFA 66
           +H+  ++ AGF VLK+PD+PS+LVE G++SN+GD   L+ E  R +   ++   +  +F 
Sbjct: 320 LHQKRVEQAGFAVLKSPDIPSILVETGFISNRGDCRRLMDERHRQRLAEAIFAGVQGYFR 379

Query: 67  KRLATAGS 74
           +R   AGS
Sbjct: 380 QR-PPAGS 386


>BMEI1056 [M] COG0860 N-acetylmuramoyl-L-alanine amidase Bme Brucella
           melitensis
          Length = 390

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 44/68 (64%)

Query: 1   MRTTVRMHKHPLKSAGFRVLKAPDVPSVLVEIGYVSNKGDLEHLVSESWRNKAVGSMVQA 60
           ++  V +  +P + AGF+VL+APDVPSVL+EIGY+SN  D + + +  WR K    +  A
Sbjct: 315 LQGQVNLINNPHRFAGFQVLRAPDVPSVLIEIGYLSNPEDEKLISNPEWRKKLADRIALA 374

Query: 61  IDTFFAKR 68
           +  F A++
Sbjct: 375 VKAFAARK 382


>RSc2539 [M] COG0860 N-acetylmuramoyl-L-alanine amidase Rso Ralstonia
           solanacearum
          Length = 507

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 42/62 (67%)

Query: 6   RMHKHPLKSAGFRVLKAPDVPSVLVEIGYVSNKGDLEHLVSESWRNKAVGSMVQAIDTFF 65
           R+HK  ++ AGF VLKAPD+PS+L+E  ++SN  +   L   +++N+   ++++ I  +F
Sbjct: 436 RLHKGQVEQAGFAVLKAPDIPSILIETAFISNPEEESKLTDSAYQNQLAEAILRGIRAYF 495

Query: 66  AK 67
           AK
Sbjct: 496 AK 497