BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0106.0080.p         (138 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0317 Non COG                                                        89   3e-18
PA2120 Non COG                                                         84   1e-16

>RSp0317 Non COG
          Length = 147

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 52/131 (39%), Positives = 69/131 (52%), Gaps = 4/131 (3%)

Query: 2   SKPGLDKWYAYMKSHDTAALWDLLHPDAVFESPVVHTPQRGRDITFKYLTSAAKVLGGPT 61
           ++  L  W+A ++S D  AL  L   D VF SPV HTP  GR+     L +   V     
Sbjct: 13  ARATLGAWHAMLESGDLDALDMLFAEDVVFRSPVAHTPYPGRNAAALVLRTVVTVF--EA 70

Query: 62  FKYLGEWQSDAGA--VLEFENEIDGIKLNGVDIITFDGDGRITHFKVMVRPLKAINLLHR 119
           F+Y   + +D GA  VLEF   + G  L G+D+I FD DG+I  F+VMVRP   +  L  
Sbjct: 71  FRYHRGFATDDGASVVLEFSAAVAGKSLKGIDMIRFDADGKIIEFEVMVRPATGLQALGA 130

Query: 120 MMGEELMKQSG 130
            MG +L  Q G
Sbjct: 131 AMGAKLGDQLG 141


>PA2120 Non COG
          Length = 142

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 64/129 (49%), Gaps = 4/129 (3%)

Query: 6   LDKWYAYMKSHDTAALWDLLHPDAVFESPVVHTPQRGRDITFKYLTSAAKVLGGPTFKYL 65
           L +W+  +   D + L  LLHPDAVF SP+ H P  G  +    L +   V     F Y 
Sbjct: 14  LAEWHGLIARRDLSGLPRLLHPDAVFRSPMAHKPYAGAPVVSMILNTVLTVF--EDFAYH 71

Query: 66  GEWQSDAG--AVLEFENEIDGIKLNGVDIITFDGDGRITHFKVMVRPLKAINLLHRMMGE 123
            +  S  G   VLEF   +   +L G+D+I FD DGRI  F+VMVRP+  +  L   MG 
Sbjct: 72  RQLASADGRSVVLEFSARVGERELKGIDMIRFDDDGRIVDFEVMVRPMSGLQALGEEMGR 131

Query: 124 ELMKQSGAT 132
            L     A+
Sbjct: 132 RLASYLAAS 140