BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0106.0073.p         (174 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc00384 [K] COG1846 Transcriptional regulators Sme Sinorhizobiu...   139   4e-33
mll1407 [K] COG1846 Transcriptional regulators Mlo Mesorhizobium...   116   2e-26

>SMc00384 [K] COG1846 Transcriptional regulators Sme Sinorhizobium meliloti
          Length = 169

 Score =  139 bits (349), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 73/148 (49%), Positives = 92/148 (62%), Gaps = 4/148 (2%)

Query: 1   MKRKLSSE----ATAAWIRLMRVPSRVLDCVEQDLKKAGFPPLAWYDALLELSRAPSGEL 56
           +KR  SSE    AT AWI LMR   R L  +E+D K AG PPL WYD L EL +A  G L
Sbjct: 22  VKRTDSSEPTAAATEAWIGLMRAQRRALSAIERDFKAAGLPPLGWYDVLWELVKAEGGRL 81

Query: 57  RPVELERQMLIPQYSTSRLIDKLVDEGLAARRECKIDKRGQFVEITEAGRELQKRMWNAY 116
           RP E+E + L+ QY+ SRLID+L  EGL  R     D RG +V +T  GR +++RMW  Y
Sbjct: 82  RPFEIEARTLLAQYNLSRLIDRLEKEGLVQREAFDEDARGCWVVVTGKGRAMRERMWQTY 141

Query: 117 SAAIDKHVGSKLSDADATRLCGLLDRLG 144
             +I +HVG+KL + +A  L  LL RLG
Sbjct: 142 GPSIARHVGAKLGEEEAGALASLLSRLG 169


>mll1407 [K] COG1846 Transcriptional regulators Mlo Mesorhizobium loti
          Length = 152

 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/138 (44%), Positives = 84/138 (60%)

Query: 6   SSEATAAWIRLMRVPSRVLDCVEQDLKKAGFPPLAWYDALLELSRAPSGELRPVELERQM 65
           S EA  AW RLMRV  ++++  E  LK++G PPLAWYD L EL+ A  G LRP +L  + 
Sbjct: 8   SPEAITAWARLMRVSRQLVERAEDTLKESGLPPLAWYDVLHELAEAGEGGLRPFQLIERT 67

Query: 66  LIPQYSTSRLIDKLVDEGLAARRECKIDKRGQFVEITEAGRELQKRMWNAYSAAIDKHVG 125
           L  QY+ SRL+ +L  +GL  +     D RGQ + IT  GRE ++RMW  Y  +I + VG
Sbjct: 68  LFAQYNISRLLARLEADGLVEKLPVADDGRGQTIRITAKGRETRRRMWAIYGRSIAELVG 127

Query: 126 SKLSDADATRLCGLLDRL 143
           +KLS  +   +  LL RL
Sbjct: 128 AKLSADELKMMSALLGRL 145